Wall clock time and date at job start Sat Mar 6 2021 11:12:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86300 * 109.47378 * 2 1 4 4 C 1.50707 * 109.46973 * 120.00211 * 2 1 3 5 5 C 1.38898 * 119.67230 * 245.00029 * 4 2 1 6 6 C 1.36470 * 120.61316 * 180.02562 * 5 4 2 7 7 C 1.40063 * 119.83291 * 359.96606 * 6 5 4 8 8 C 1.41594 * 133.38525 * 180.30753 * 7 6 5 9 9 C 1.35863 * 107.72937 * 180.10787 * 8 7 6 10 10 C 1.47058 * 125.42589 * 179.88264 * 9 8 7 11 11 O 1.21653 * 119.99985 * 359.69148 * 10 9 8 12 12 N 1.34777 * 119.99966 * 179.41864 * 10 9 8 13 13 C 1.46504 * 119.99854 * 180.27718 * 12 10 9 14 14 H 1.08998 * 112.84936 * 23.79679 * 13 12 10 15 15 C 1.53781 * 113.61288 * 154.99591 * 13 12 10 16 16 C 1.53785 * 87.08071 * 89.11253 * 15 13 12 17 17 H 1.09001 * 113.61771 * 270.88745 * 16 15 13 18 18 C 1.50699 * 113.61480 * 140.06000 * 16 15 13 19 19 C 1.38240 * 119.99366 * 299.73148 * 18 16 15 20 20 C 1.38220 * 120.00953 * 179.72333 * 19 18 16 21 21 C 1.38325 * 119.99059 * 0.54717 * 20 19 18 22 22 Br 1.89096 * 120.00980 * 179.70299 * 21 20 19 23 23 C 1.38328 * 119.97893 * 359.72707 * 21 20 19 24 24 C 1.38224 * 119.98939 * 359.97438 * 23 21 20 25 25 C 1.53782 * 113.61214 * 252.49376 * 13 12 10 26 26 N 1.38152 * 109.14669 * 359.61718 * 9 8 7 27 27 C 1.37494 * 108.78718 * 0.24368 * 26 9 8 28 28 C 1.37705 * 119.67630 * 64.97368 * 4 2 1 29 29 H 0.96703 * 113.99451 * 299.99817 * 1 2 3 30 30 H 1.08997 * 109.46728 * 239.99870 * 2 1 3 31 31 H 1.48495 * 110.00148 * 178.68041 * 3 2 1 32 32 H 1.48507 * 109.99763 * 300.00221 * 3 2 1 33 33 H 1.08001 * 119.69220 * 359.97438 * 5 4 2 34 34 H 1.08005 * 120.08574 * 179.97438 * 6 5 4 35 35 H 1.08003 * 126.13486 * 359.96864 * 8 7 6 36 36 H 0.97000 * 119.99736 * 0.26993 * 12 10 9 37 37 H 1.08993 * 113.61456 * 203.66261 * 15 13 12 38 38 H 1.08994 * 113.61312 * 334.48508 * 15 13 12 39 39 H 1.08006 * 119.99242 * 359.97438 * 19 18 16 40 40 H 1.08005 * 119.99891 * 180.24820 * 20 19 18 41 41 H 1.07993 * 120.00626 * 179.97438 * 23 21 20 42 42 H 1.07992 * 119.99260 * 179.97438 * 24 23 21 43 43 H 1.09000 * 113.61489 * 25.43297 * 25 13 12 44 44 H 1.08992 * 113.61429 * 156.33792 * 25 13 12 45 45 H 0.96996 * 125.60235 * 180.26548 * 26 9 8 46 46 H 1.08001 * 120.09749 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.6414 -0.0024 2.1916 6 6 3.1056 -0.6267 3.3129 7 6 2.8648 -1.9938 3.4995 8 6 3.1978 -2.9085 4.5278 9 6 2.7034 -4.1242 4.1761 10 6 2.8306 -5.3574 4.9671 11 8 3.4234 -5.3403 6.0293 12 7 2.2858 -6.5053 4.5178 13 6 2.4073 -7.7325 5.3088 14 1 2.5695 -7.5384 6.3690 15 6 1.2928 -8.7557 5.0333 16 6 2.1935 -9.3196 3.9215 17 1 2.0447 -8.8404 2.9539 18 6 2.1791 -10.8242 3.8379 19 6 2.5864 -11.5804 4.9211 20 6 2.5679 -12.9605 4.8468 21 6 2.1525 -13.5849 3.6844 22 35 2.1350 -15.4728 3.5792 23 6 1.7504 -12.8277 2.5988 24 6 1.7634 -11.4477 2.6762 25 6 3.3869 -8.7561 4.7110 26 7 2.0570 -4.0159 2.9600 27 6 2.1445 -2.7141 2.5263 28 6 1.6814 -2.0551 1.3912 29 1 -0.3932 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 3.5347 1.7702 0.0321 32 1 1.5616 2.4679 -1.2085 33 1 2.8286 1.0517 2.0498 34 1 3.6571 -0.0679 4.0546 35 1 3.7482 -2.6812 5.4288 36 1 1.8131 -6.5189 3.6709 37 1 1.1262 -9.4518 5.8553 38 1 0.3703 -8.3078 4.6643 39 1 2.9152 -11.0928 5.8270 40 1 2.8823 -13.5512 5.6945 41 1 1.4264 -13.3146 1.6910 42 1 1.4499 -10.8565 1.8286 43 1 4.1553 -8.3086 4.0805 44 1 3.7928 -9.4522 5.4449 45 1 1.6140 -4.7393 2.4896 46 1 1.1284 -2.5969 0.6382 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:12:49 Heat of formation + Delta-G solvation = 55.889710 kcal Electronic energy + Delta-G solvation = -30311.920272 eV Core-core repulsion = 25987.550645 eV Total energy + Delta-G solvation = -4324.369628 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.73488 -41.57050 -40.38232 -39.13303 -38.69984 -36.86913 -34.90722 -33.31607 -33.06469 -32.06413 -31.16962 -30.41755 -30.29974 -27.21562 -26.75004 -25.85521 -24.47716 -23.85661 -23.20738 -22.43165 -22.00660 -21.32120 -20.27867 -19.57465 -18.45581 -18.05494 -17.72800 -17.05707 -16.81664 -16.55460 -16.50126 -16.15216 -16.14085 -15.68486 -15.53161 -15.33604 -15.05033 -14.96424 -14.75306 -14.60360 -14.51804 -14.48147 -14.30951 -14.08437 -13.55100 -13.47735 -13.16114 -12.94190 -12.56147 -12.52422 -12.44089 -12.10748 -12.05475 -11.92339 -11.64938 -11.45899 -11.44139 -11.30712 -11.26265 -10.96305 -10.42482 -10.29763 -10.03304 -9.53838 -9.33442 -8.83769 -4.93843 -0.38555 0.02901 0.29872 0.52770 0.63664 0.92908 1.35036 1.68850 1.72149 1.91662 2.03101 2.14505 2.53784 2.77179 3.38606 3.47882 3.57763 3.60712 3.66868 3.70825 3.74122 3.79807 3.91677 3.92885 4.04375 4.15218 4.24497 4.29328 4.33293 4.38300 4.44678 4.49115 4.57558 4.63372 4.68411 4.74644 4.79537 4.83379 4.88564 4.97371 4.98539 5.00657 5.06899 5.20612 5.21602 5.29527 5.40285 5.42947 5.53657 5.57517 5.59564 5.81463 5.97841 6.22853 6.41529 6.80196 6.92281 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.070 4.070 3 Si 0.775 3.225 4 C -0.090 4.090 5 C -0.146 4.146 6 C -0.058 4.058 7 C -0.135 4.135 8 C -0.117 4.117 9 C 0.010 3.990 10 C 0.589 3.411 11 O -0.558 6.558 12 N -0.695 5.695 13 C 0.114 3.886 14 H 0.093 0.907 15 C -0.123 4.123 16 C -0.068 4.068 17 H 0.115 0.885 18 C -0.057 4.057 19 C -0.114 4.114 20 C -0.099 4.099 21 C -0.110 4.110 22 Br -0.064 7.064 23 C -0.100 4.100 24 C -0.113 4.113 25 C -0.142 4.142 26 N -0.564 5.564 27 C 0.108 3.892 28 C -0.110 4.110 29 H 0.396 0.604 30 H 0.109 0.891 31 H -0.287 1.287 32 H -0.302 1.302 33 H 0.148 0.852 34 H 0.148 0.852 35 H 0.156 0.844 36 H 0.412 0.588 37 H 0.105 0.895 38 H 0.090 0.910 39 H 0.148 0.852 40 H 0.138 0.862 41 H 0.138 0.862 42 H 0.151 0.849 43 H 0.068 0.932 44 H 0.101 0.899 45 H 0.431 0.569 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.049 2.298 -0.880 3.918 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.180 4.180 3 Si 0.681 3.319 4 C -0.092 4.092 5 C -0.164 4.164 6 C -0.077 4.077 7 C -0.140 4.140 8 C -0.144 4.144 9 C -0.100 4.100 10 C 0.376 3.624 11 O -0.436 6.436 12 N -0.346 5.346 13 C 0.009 3.991 14 H 0.111 0.889 15 C -0.161 4.161 16 C -0.086 4.086 17 H 0.133 0.867 18 C -0.057 4.057 19 C -0.133 4.133 20 C -0.119 4.119 21 C -0.189 4.189 22 Br 0.022 6.978 23 C -0.120 4.120 24 C -0.131 4.131 25 C -0.181 4.181 26 N -0.170 5.170 27 C -0.003 4.003 28 C -0.131 4.131 29 H 0.246 0.754 30 H 0.126 0.874 31 H -0.214 1.214 32 H -0.230 1.230 33 H 0.165 0.835 34 H 0.166 0.834 35 H 0.173 0.827 36 H 0.248 0.752 37 H 0.123 0.877 38 H 0.108 0.892 39 H 0.166 0.834 40 H 0.155 0.845 41 H 0.156 0.844 42 H 0.168 0.832 43 H 0.087 0.913 44 H 0.120 0.880 45 H 0.272 0.728 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.142 1.661 -1.138 2.939 hybrid contribution -0.119 -0.962 -0.794 1.253 sum -2.261 0.699 -1.931 3.054 Atomic orbital electron populations 1.86472 1.17109 1.82161 1.50555 1.25148 0.85311 1.10642 0.96932 0.93621 0.77970 0.75556 0.84726 1.20159 0.98595 0.93608 0.96798 1.20685 1.00965 1.00309 0.94476 1.20646 0.97589 0.91719 0.97709 1.18447 1.04362 0.95171 0.95994 1.21109 1.02579 0.90587 1.00108 1.19953 1.05293 0.95472 0.89251 1.17262 0.78403 0.82375 0.84324 1.90867 1.43650 1.85560 1.23486 1.45419 1.56430 1.07790 1.24933 1.21937 0.98048 0.82885 0.96217 0.88855 1.23387 0.97086 0.96767 0.98869 1.21662 0.97125 0.89950 0.99857 0.86689 1.19997 0.96519 0.95801 0.93387 1.21263 0.99686 0.92582 0.99720 1.21309 0.98371 0.95606 0.96604 1.21989 1.08223 0.90147 0.98580 1.96758 1.97934 1.04280 1.98856 1.21327 0.98437 0.94554 0.97634 1.21344 0.99553 0.93578 0.98668 1.23578 0.96632 0.97875 1.00011 1.41772 1.48343 1.09070 1.17814 1.18436 1.00774 0.84432 0.96659 1.19996 1.02881 0.94186 0.96007 0.75414 0.87385 1.21379 1.23034 0.83452 0.83414 0.82683 0.75159 0.87711 0.89188 0.83448 0.84459 0.84418 0.83168 0.91298 0.88033 0.72801 0.84758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.97 12.83 -148.98 -1.91 -0.94 16 2 C -0.07 0.17 2.79 71.24 0.20 0.37 16 3 Si 0.77 -2.59 29.76 68.60 2.04 -0.55 16 4 C -0.09 0.14 5.36 -19.83 -0.11 0.03 16 5 C -0.15 0.37 8.59 22.01 0.19 0.55 16 6 C -0.06 0.04 10.06 22.30 0.22 0.27 16 7 C -0.14 -0.33 6.16 -21.36 -0.13 -0.46 16 8 C -0.12 -0.43 10.53 22.55 0.24 -0.19 16 9 C 0.01 0.02 6.97 39.91 0.28 0.29 16 10 C 0.59 1.67 7.80 86.56 0.68 2.35 16 11 O -0.56 -6.25 16.44 -4.20 -0.07 -6.31 16 12 N -0.69 3.26 5.26 -443.63 -2.33 0.92 16 13 C 0.11 -0.52 4.32 45.52 0.20 -0.33 16 14 H 0.09 -0.03 7.46 -2.39 -0.02 -0.04 16 15 C -0.12 1.05 7.29 31.12 0.23 1.27 16 16 C -0.07 0.55 3.85 -11.01 -0.04 0.51 16 17 H 0.12 -1.28 8.09 -2.39 -0.02 -1.30 16 18 C -0.06 0.25 5.29 -19.86 -0.11 0.15 16 19 C -0.11 0.36 8.63 22.27 0.19 0.55 16 20 C -0.10 0.02 9.79 22.29 0.22 0.24 16 21 C -0.11 -0.19 6.22 22.31 0.14 -0.05 16 22 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.89 16 23 C -0.10 0.05 9.79 22.29 0.22 0.26 16 24 C -0.11 0.41 9.71 22.27 0.22 0.63 16 25 C -0.14 0.79 7.25 31.12 0.23 1.01 16 26 N -0.56 1.77 6.07 -177.18 -1.08 0.69 16 27 C 0.11 0.06 7.25 39.13 0.28 0.34 16 28 C -0.11 0.08 9.69 22.37 0.22 0.30 16 29 H 0.40 -3.76 8.70 -74.06 -0.64 -4.41 16 30 H 0.11 -0.16 7.96 -2.39 -0.02 -0.18 16 31 H -0.29 -0.49 7.11 99.48 0.71 0.22 16 32 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 33 H 0.15 -1.03 4.85 -2.91 -0.01 -1.05 16 34 H 0.15 -0.70 8.06 -2.91 -0.02 -0.72 16 35 H 0.16 0.52 8.06 -2.91 -0.02 0.49 16 36 H 0.41 -4.50 7.76 -92.71 -0.72 -5.22 16 37 H 0.10 -0.88 7.73 -2.39 -0.02 -0.90 16 38 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 39 H 0.15 -0.99 6.65 -2.91 -0.02 -1.01 16 40 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 41 H 0.14 -0.31 8.06 -2.91 -0.02 -0.34 16 42 H 0.15 -1.24 8.05 -2.91 -0.02 -1.26 16 43 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 44 H 0.10 -0.60 6.30 -2.39 -0.02 -0.61 16 45 H 0.43 -4.33 8.12 -92.71 -0.75 -5.08 16 46 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 Total: 0.00 -21.42 403.86 -1.49 -22.91 By element: Atomic # 1 Polarization: -22.92 SS G_CDS: -1.00 Total: -23.92 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 3.55 Total: 8.09 kcal Atomic # 7 Polarization: 5.02 SS G_CDS: -3.41 Total: 1.61 kcal Atomic # 8 Polarization: -5.27 SS G_CDS: -1.98 Total: -7.25 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: 2.04 Total: -0.55 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.89 kcal Total: -21.42 -1.49 -22.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.795 kcal (2) G-P(sol) polarization free energy of solvation -21.417 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.488 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.905 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds