Wall clock time and date at job start Sat Mar 6 2021 11:13:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86309 * 109.46848 * 2 1 4 4 C 1.50702 * 109.47416 * 119.99590 * 2 1 3 5 5 C 1.34708 * 125.65939 * 64.97928 * 4 2 1 6 6 C 1.40972 * 107.02335 * 179.78539 * 5 4 2 7 7 C 1.35936 * 106.74391 * 0.34979 * 6 5 4 8 8 C 1.47813 * 125.92912 * 179.91255 * 7 6 5 9 9 C 1.39177 * 120.00195 * 179.97438 * 8 7 6 10 10 C 1.39464 * 119.76053 * 180.22978 * 9 8 7 11 11 C 1.47558 * 120.11959 * 179.74857 * 10 9 8 12 12 O 1.21595 * 119.99591 * 179.72729 * 11 10 9 13 13 N 1.34772 * 120.00462 * 359.72815 * 11 10 9 14 14 C 1.46506 * 120.00033 * 180.02562 * 13 11 10 15 15 H 1.08992 * 112.90684 * 336.24748 * 14 13 11 16 16 C 1.54049 * 113.61276 * 107.61836 * 14 13 11 17 17 C 1.53781 * 87.08031 * 89.07129 * 16 14 13 18 18 H 1.08999 * 113.61181 * 270.87794 * 17 16 14 19 19 C 1.50696 * 113.69134 * 139.98880 * 17 16 14 20 20 C 1.38241 * 119.99122 * 322.18863 * 19 17 16 21 21 C 1.38220 * 120.01234 * 179.72968 * 20 19 17 22 22 C 1.38328 * 119.98490 * 0.54507 * 21 20 19 23 23 Br 1.89105 * 120.00611 * 179.70443 * 22 21 20 24 24 C 1.38315 * 119.98127 * 359.72868 * 22 21 20 25 25 C 1.38217 * 119.99637 * 0.02562 * 24 22 21 26 26 C 1.53781 * 87.08070 * 25.42738 * 17 16 14 27 27 C 1.40209 * 119.75387 * 359.47682 * 10 9 8 28 28 O 1.35650 * 120.00224 * 180.25503 * 27 10 9 29 29 C 1.38817 * 119.99666 * 0.26933 * 27 10 9 30 30 C 1.37775 * 120.24560 * 0.02562 * 29 27 10 31 31 O 1.34336 * 125.66533 * 244.98245 * 4 2 1 32 32 H 0.96698 * 114.00628 * 299.99335 * 1 2 3 33 33 H 1.09000 * 109.47501 * 240.00249 * 2 1 3 34 34 H 1.48500 * 109.99956 * 178.68158 * 3 2 1 35 35 H 1.48498 * 109.99573 * 300.00054 * 3 2 1 36 36 H 1.07992 * 126.49012 * 0.02562 * 5 4 2 37 37 H 1.08007 * 126.62614 * 180.25228 * 6 5 4 38 38 H 1.08007 * 120.11884 * 0.02562 * 9 8 7 39 39 H 0.97002 * 120.00078 * 359.97438 * 13 11 10 40 40 H 1.09005 * 113.62125 * 334.52173 * 16 14 13 41 41 H 1.08996 * 113.68970 * 203.62749 * 16 14 13 42 42 H 1.08003 * 119.99094 * 359.97438 * 20 19 17 43 43 H 1.08001 * 120.00652 * 180.25329 * 21 20 19 44 44 H 1.08005 * 120.00537 * 179.97438 * 24 22 21 45 45 H 1.07998 * 120.00299 * 179.97438 * 25 24 22 46 46 H 1.09002 * 113.61445 * 89.11830 * 26 17 16 47 47 H 1.09002 * 113.61408 * 219.93560 * 26 17 16 48 48 H 0.96702 * 114.00200 * 89.99698 * 28 27 10 49 49 H 1.08005 * 119.88004 * 179.97438 * 29 27 10 50 50 H 1.07994 * 119.87542 * 179.97438 * 30 29 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.7568 -2.0166 1.5095 6 6 2.3860 -2.2620 2.7469 7 6 2.9085 -1.0777 3.1623 8 6 3.6598 -0.8530 4.4152 9 6 4.1421 0.4166 4.7194 10 6 4.8544 0.6219 5.9006 11 6 5.3741 1.9635 6.2282 12 8 5.9907 2.1410 7.2611 13 7 5.1655 2.9920 5.3827 14 6 5.6820 4.3239 5.7078 15 1 5.8375 4.4694 6.7767 16 6 6.8853 4.7469 4.8439 17 6 5.8664 5.3255 3.8479 18 1 5.5326 4.6079 3.0984 19 6 6.2857 6.6437 3.2500 20 6 6.9433 7.5777 4.0286 21 6 7.3330 8.7847 3.4792 22 6 7.0548 9.0625 2.1529 23 35 7.5803 10.7170 1.4029 24 6 6.3918 8.1300 1.3758 25 6 6.0070 6.9212 1.9246 26 6 4.9023 5.4675 5.0375 27 6 5.0700 -0.4500 6.7784 28 8 5.7578 -0.2548 7.9312 29 6 4.5799 -1.7110 6.4676 30 6 3.8814 -1.9150 5.2977 31 8 2.6276 -0.1460 2.2312 32 1 -0.3934 0.4416 0.7650 33 1 1.7924 -0.5138 -0.8900 34 1 3.5345 1.7705 0.0321 35 1 1.5613 2.4679 -1.2085 36 1 1.2368 -2.7398 0.8989 37 1 2.4409 -3.2078 3.2655 38 1 3.9681 1.2392 4.0414 39 1 4.6740 2.8504 4.5586 40 1 7.4550 3.9065 4.4471 41 1 7.5161 5.5027 5.3117 42 1 7.1561 7.3627 5.0654 43 1 7.8503 9.5127 4.0865 44 1 6.1741 8.3466 0.3403 45 1 5.4890 6.1932 1.3180 46 1 4.9901 6.4204 5.5593 47 1 3.8708 5.2102 4.7966 48 1 5.2026 -0.0077 8.6835 49 1 4.7474 -2.5354 7.1449 50 1 3.5031 -2.8986 5.0616 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:01 Heat of formation + Delta-G solvation = -0.797076 kcal Electronic energy + Delta-G solvation = -37200.355128 eV Core-core repulsion = 32173.362763 eV Total energy + Delta-G solvation = -5026.992365 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.061 amu Computer time = 2.54 seconds Orbital eigenvalues (eV) -43.77086 -41.88994 -41.11319 -39.85524 -38.67020 -38.17530 -37.82529 -34.84704 -34.24463 -33.26832 -32.78614 -32.24489 -32.07365 -30.33065 -30.08873 -26.86621 -26.47667 -26.35731 -25.17079 -24.01062 -23.63422 -23.04305 -22.46825 -21.91966 -21.26655 -20.33099 -19.61655 -19.20919 -18.48289 -18.06046 -17.65760 -17.50068 -17.17368 -16.77665 -16.69334 -16.39557 -16.30458 -16.16702 -15.88671 -15.82581 -15.46915 -15.19561 -15.05777 -14.68232 -14.56076 -14.50737 -14.34596 -14.28266 -14.05301 -13.96783 -13.71274 -13.61745 -13.48070 -13.27418 -13.19072 -12.96567 -12.88301 -12.51169 -12.20392 -12.11412 -11.99781 -11.88331 -11.47166 -11.34914 -11.23260 -11.12230 -10.84090 -10.75727 -10.51567 -10.37714 -10.12869 -10.06588 -9.55115 -8.97522 -5.18332 -0.62505 -0.29094 0.00107 0.24829 0.66360 0.70840 1.02804 1.34669 1.43697 1.66360 1.81827 1.87086 1.94269 2.48794 2.56784 3.03082 3.13175 3.23387 3.28501 3.40455 3.49355 3.51968 3.57253 3.70728 3.80219 3.81667 3.85083 3.90851 3.92299 4.01826 4.08976 4.20570 4.24646 4.30084 4.32016 4.49337 4.52335 4.55170 4.57832 4.63492 4.68633 4.72012 4.76638 4.77152 4.87498 4.91626 4.93791 4.97448 5.05351 5.09265 5.16005 5.16778 5.34132 5.37908 5.41875 5.53147 5.73886 5.91589 6.30435 6.36472 6.61863 7.14264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.699 3.301 4 C -0.051 4.051 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.054 4.054 10 C -0.165 4.165 11 C 0.564 3.436 12 O -0.514 6.514 13 N -0.712 5.712 14 C 0.121 3.879 15 H 0.109 0.891 16 C -0.144 4.144 17 C -0.078 4.078 18 H 0.100 0.900 19 C -0.055 4.055 20 C -0.111 4.111 21 C -0.087 4.087 22 C -0.095 4.095 23 Br -0.051 7.051 24 C -0.088 4.088 25 C -0.111 4.111 26 C -0.134 4.134 27 C 0.181 3.819 28 O -0.475 6.475 29 C -0.148 4.148 30 C -0.052 4.052 31 O -0.166 6.166 32 H 0.384 0.616 33 H 0.133 0.867 34 H -0.251 1.251 35 H -0.246 1.246 36 H 0.154 0.846 37 H 0.154 0.846 38 H 0.135 0.865 39 H 0.400 0.600 40 H 0.076 0.924 41 H 0.097 0.903 42 H 0.133 0.867 43 H 0.133 0.867 44 H 0.133 0.867 45 H 0.131 0.869 46 H 0.100 0.900 47 H 0.079 0.921 48 H 0.400 0.600 49 H 0.146 0.854 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.490 -1.519 0.757 4.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.138 4.138 3 Si 0.598 3.402 4 C -0.101 4.101 5 C -0.189 4.189 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.073 4.073 10 C -0.168 4.168 11 C 0.351 3.649 12 O -0.389 6.389 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.127 0.873 16 C -0.183 4.183 17 C -0.096 4.096 18 H 0.118 0.882 19 C -0.055 4.055 20 C -0.130 4.130 21 C -0.107 4.107 22 C -0.174 4.174 23 Br 0.035 6.965 24 C -0.108 4.108 25 C -0.130 4.130 26 C -0.172 4.172 27 C 0.134 3.866 28 O -0.287 6.287 29 C -0.167 4.167 30 C -0.071 4.071 31 O -0.063 6.063 32 H 0.232 0.768 33 H 0.150 0.850 34 H -0.176 1.176 35 H -0.170 1.170 36 H 0.172 0.828 37 H 0.172 0.828 38 H 0.153 0.847 39 H 0.235 0.765 40 H 0.095 0.905 41 H 0.115 0.885 42 H 0.151 0.849 43 H 0.151 0.849 44 H 0.151 0.849 45 H 0.148 0.852 46 H 0.119 0.881 47 H 0.098 0.902 48 H 0.259 0.741 49 H 0.164 0.836 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -2.698 -0.291 -0.061 2.714 hybrid contribution -0.686 -1.226 -0.316 1.440 sum -3.384 -1.517 -0.377 3.728 Atomic orbital electron populations 1.86570 1.16119 1.81744 1.49121 1.24414 0.85243 1.11238 0.92946 0.94422 0.81426 0.77017 0.87302 1.22899 1.01035 0.93930 0.92266 1.21575 1.03641 0.95682 0.97966 1.21869 1.02769 0.98434 0.97614 1.20264 1.03059 0.87446 0.90733 1.17566 1.00253 0.94157 0.91413 1.21287 0.94362 0.96625 0.94988 1.20257 1.04512 0.94213 0.97851 1.17967 0.79606 0.83719 0.83613 1.90845 1.39419 1.83903 1.24729 1.45590 1.57979 1.08489 1.24374 1.21891 0.94492 0.81291 1.00728 0.87321 1.23629 0.96664 1.01329 0.96667 1.21661 0.97728 0.93916 0.96320 0.88225 1.19825 0.96690 0.95343 0.93649 1.21043 0.98654 0.92965 1.00327 1.21146 0.98773 0.97494 0.93263 1.21857 1.05253 0.93924 0.96371 1.96782 1.90619 1.25107 1.84020 1.21145 0.96760 0.92936 0.99940 1.21086 1.00268 0.96710 0.94892 1.23435 0.98889 0.99042 0.95876 1.18597 0.89210 0.90851 0.87944 1.84753 1.35214 1.90901 1.17837 1.21409 0.99272 0.97342 0.98652 1.21134 0.95525 0.98430 0.91968 1.83905 1.57947 1.37948 1.26511 0.76842 0.84980 1.17562 1.16993 0.82822 0.82785 0.84692 0.76477 0.90533 0.88454 0.84911 0.84876 0.84949 0.85157 0.88118 0.90192 0.74085 0.83605 0.84208 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.68 12.88 -35.23 -0.45 0.22 16 2 C -0.03 0.04 2.98 36.01 0.11 0.15 16 3 Si 0.70 -1.55 32.11 -169.99 -5.46 -7.01 16 4 C -0.05 0.02 6.20 -35.56 -0.22 -0.20 16 5 C -0.17 0.01 10.78 -39.80 -0.43 -0.42 16 6 C -0.19 0.09 10.26 -39.37 -0.40 -0.32 16 7 C 0.03 0.00 7.03 -36.49 -0.26 -0.26 16 8 C -0.03 0.02 5.87 -105.03 -0.62 -0.59 16 9 C -0.05 0.06 9.20 -38.78 -0.36 -0.30 16 10 C -0.16 -0.08 5.88 -104.90 -0.62 -0.70 16 11 C 0.56 0.93 7.76 -12.46 -0.10 0.84 16 12 O -0.51 -2.62 14.74 -16.67 -0.25 -2.87 16 13 N -0.71 0.90 5.21 -53.91 -0.28 0.62 16 14 C 0.12 -0.18 4.34 -66.97 -0.29 -0.47 16 15 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 16 C -0.14 0.24 7.27 -25.78 -0.19 0.06 16 17 C -0.08 0.21 3.85 -90.96 -0.35 -0.14 16 18 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 19 C -0.05 0.07 5.29 -104.62 -0.55 -0.49 16 20 C -0.11 0.11 8.60 -39.59 -0.34 -0.23 16 21 C -0.09 -0.01 9.79 -39.55 -0.39 -0.39 16 22 C -0.09 -0.09 6.22 -39.52 -0.25 -0.33 16 23 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 24 C -0.09 -0.01 9.79 -39.56 -0.39 -0.40 16 25 C -0.11 0.10 9.71 -39.59 -0.38 -0.29 16 26 C -0.13 0.43 7.28 -25.92 -0.19 0.24 16 27 C 0.18 0.11 6.72 -38.63 -0.26 -0.15 16 28 O -0.48 -0.68 11.55 -40.60 -0.47 -1.15 16 29 C -0.15 0.19 9.96 -39.54 -0.39 -0.20 16 30 C -0.05 0.09 9.54 -39.15 -0.37 -0.28 16 31 O -0.17 0.02 8.80 4.59 0.04 0.06 16 32 H 0.38 -1.94 8.70 45.56 0.40 -1.54 16 33 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 34 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 35 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 36 H 0.15 -0.15 8.06 -52.49 -0.42 -0.57 16 37 H 0.15 -0.39 7.25 -52.48 -0.38 -0.77 16 38 H 0.14 -0.42 6.24 -52.48 -0.33 -0.74 16 39 H 0.40 -1.42 6.73 -40.82 -0.27 -1.69 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.10 -0.20 6.33 -51.93 -0.33 -0.53 16 42 H 0.13 -0.35 6.68 -52.48 -0.35 -0.70 16 43 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.13 -0.12 8.06 -52.48 -0.42 -0.54 16 45 H 0.13 -0.35 8.05 -52.49 -0.42 -0.78 16 46 H 0.10 -0.33 7.71 -51.93 -0.40 -0.73 16 47 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 48 H 0.40 -0.96 9.06 45.56 0.41 -0.55 16 49 H 0.15 -0.44 8.06 -52.48 -0.42 -0.86 16 50 H 0.14 -0.54 6.96 -52.49 -0.37 -0.91 16 LS Contribution 443.28 15.07 6.68 6.68 Total: 0.00 -9.84 443.28 -14.71 -24.55 By element: Atomic # 1 Polarization: -8.85 SS G_CDS: -5.00 Total: -13.85 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -7.23 Total: -4.89 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.28 Total: 0.62 kcal Atomic # 8 Polarization: -2.61 SS G_CDS: -1.13 Total: -3.73 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.46 Total: -7.01 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 6.68 Total: 6.68 kcal Total: -9.84 -14.71 -24.55 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.755 kcal (2) G-P(sol) polarization free energy of solvation -9.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.552 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.797 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.54 seconds