Wall clock time and date at job start Sat Mar 6 2021 11:13:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46998 * 2 1 4 4 C 1.50704 * 109.46969 * 120.00049 * 2 1 3 5 5 C 1.34188 * 126.53563 * 254.99684 * 4 2 1 6 6 N 1.36869 * 109.96259 * 180.02562 * 5 4 2 7 7 C 1.37397 * 109.98131 * 359.97438 * 6 5 4 8 8 C 1.39329 * 133.24901 * 180.02562 * 7 6 5 9 9 C 1.36352 * 120.23694 * 179.79476 * 8 7 6 10 10 C 1.40170 * 120.66885 * 0.43994 * 9 8 7 11 11 C 1.47653 * 119.97821 * 179.79644 * 10 9 8 12 12 O 1.21573 * 120.00351 * 179.72148 * 11 10 9 13 13 N 1.34783 * 119.99485 * 359.72174 * 11 10 9 14 14 C 1.46502 * 119.99683 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85025 * 23.80911 * 14 13 11 16 16 C 1.53779 * 113.61301 * 154.99921 * 14 13 11 17 17 C 1.53787 * 87.07963 * 89.11687 * 16 14 13 18 18 H 1.08994 * 113.61447 * 270.88515 * 17 16 14 19 19 C 1.50702 * 113.61150 * 139.98062 * 17 16 14 20 20 C 1.38242 * 119.98735 * 299.72237 * 19 17 16 21 21 C 1.38221 * 120.00756 * 179.76870 * 20 19 17 22 22 C 1.38336 * 119.98881 * 0.51210 * 21 20 19 23 23 Br 1.89093 * 120.01083 * 179.76415 * 22 21 20 24 24 C 1.38327 * 119.97735 * 359.74350 * 22 21 20 25 25 C 1.38223 * 119.99187 * 0.02562 * 24 22 21 26 26 C 1.53779 * 113.61564 * 252.49989 * 14 13 11 27 27 C 1.39197 * 120.05102 * 359.52039 * 10 9 8 28 28 C 1.39231 * 119.38936 * 0.25280 * 27 10 9 29 29 H 0.96702 * 113.99906 * 300.00303 * 1 2 3 30 30 H 1.09001 * 109.46676 * 239.99917 * 2 1 3 31 31 H 1.48506 * 109.99761 * 299.99945 * 3 2 1 32 32 H 1.48491 * 110.00210 * 61.31921 * 3 2 1 33 33 H 1.07997 * 125.01978 * 359.97438 * 5 4 2 34 34 H 0.96997 * 125.00403 * 180.02562 * 6 5 4 35 35 H 1.08001 * 119.88459 * 359.97289 * 8 7 6 36 36 H 1.08005 * 119.66680 * 180.23686 * 9 8 7 37 37 H 0.96996 * 119.99920 * 0.02562 * 13 11 10 38 38 H 1.08997 * 113.61646 * 334.57319 * 16 14 13 39 39 H 1.09000 * 113.61527 * 203.66590 * 16 14 13 40 40 H 1.07993 * 120.00032 * 0.02562 * 20 19 17 41 41 H 1.07992 * 120.00810 * 180.28028 * 21 20 19 42 42 H 1.08000 * 120.00266 * 179.97438 * 24 22 21 43 43 H 1.07997 * 119.99472 * 180.02562 * 25 24 22 44 44 H 1.09002 * 113.61557 * 156.33711 * 26 14 13 45 45 H 1.09004 * 113.61501 * 25.43131 * 26 14 13 46 46 H 1.07997 * 120.30269 * 180.23509 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4607 -0.1386 2.3229 6 7 2.8032 -1.1005 3.2344 7 6 2.4955 -2.3454 2.7413 8 6 2.6342 -3.6349 3.2504 9 6 2.2262 -4.7100 2.5176 10 6 1.6716 -4.5369 1.2420 11 6 1.2390 -5.7122 0.4599 12 8 0.7532 -5.5622 -0.6445 13 7 1.3827 -6.9513 0.9704 14 6 0.9530 -8.1174 0.1946 15 1 0.9292 -7.9267 -0.8783 16 6 1.6878 -9.4141 0.5735 17 6 0.5859 -9.6391 1.6223 18 1 0.8052 -9.1875 2.5898 19 6 0.1414 -11.0749 1.7323 20 6 -0.4000 -11.7167 0.6341 21 6 -0.8034 -13.0350 0.7332 22 6 -0.6751 -13.7089 1.9345 23 35 -1.2329 -15.5104 2.0726 24 6 -0.1382 -13.0646 3.0345 25 6 0.2693 -11.7477 2.9331 26 6 -0.3269 -8.7781 0.7333 27 6 1.5230 -3.2574 0.7143 28 6 1.9345 -2.1577 1.4625 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5614 2.4678 -1.2086 32 1 1.5879 2.4585 1.2241 33 1 2.5972 0.9236 2.4620 34 1 3.2034 -0.9285 4.1011 35 1 3.0637 -3.7834 4.2301 36 1 2.3345 -5.7053 2.9228 37 1 1.7699 -7.0709 1.8516 38 1 2.6743 -9.2466 1.0057 39 1 1.6937 -10.1606 -0.2207 40 1 -0.5040 -11.1893 -0.3025 41 1 -1.2221 -13.5377 -0.1259 42 1 -0.0382 -13.5902 3.9727 43 1 0.6889 -11.2448 3.7918 44 1 -0.8718 -9.3508 -0.0172 45 1 -0.9668 -8.0971 1.2945 46 1 1.0927 -3.1191 -0.2665 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:07 Heat of formation + Delta-G solvation = 51.992586 kcal Electronic energy + Delta-G solvation = -30536.182581 eV Core-core repulsion = 26211.643961 eV Total energy + Delta-G solvation = -4324.538620 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 2.53 seconds Orbital eigenvalues (eV) -42.52804 -41.63018 -40.39844 -38.95568 -37.96240 -37.40412 -34.69342 -33.32297 -33.03452 -32.09533 -30.95901 -30.59903 -30.06140 -26.81669 -26.52123 -26.20417 -24.70403 -23.86784 -23.52910 -22.44581 -21.67582 -20.83094 -20.20078 -19.40225 -18.57396 -17.97472 -17.53344 -17.34270 -16.96703 -16.57942 -16.24718 -16.20453 -15.88405 -15.72974 -15.64462 -15.26242 -15.08902 -14.87156 -14.78814 -14.67655 -14.53339 -14.36641 -14.13543 -13.77986 -13.58626 -13.54706 -13.50248 -12.92815 -12.61245 -12.47429 -12.46607 -12.14096 -12.05702 -11.95357 -11.79362 -11.43718 -11.28905 -11.21257 -10.85855 -10.82320 -10.47916 -10.09076 -10.03163 -9.52461 -9.36005 -8.86827 -4.97425 -0.08066 0.02883 0.15465 0.27471 0.68527 1.28574 1.44143 1.54255 1.92281 1.95523 1.99159 2.10662 2.51840 2.93346 3.34812 3.48201 3.53799 3.54516 3.61792 3.69653 3.73869 3.77488 3.81191 3.87553 3.87765 4.03597 4.06796 4.27496 4.32410 4.35797 4.39570 4.46928 4.55352 4.56371 4.62470 4.66887 4.76044 4.81575 4.81963 4.92079 4.96226 4.99354 5.04477 5.19208 5.19418 5.21928 5.34454 5.45064 5.50102 5.57218 5.61423 5.76678 5.94757 6.31947 6.51053 6.52468 7.30186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.042 4.042 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.059 3.941 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.134 4.134 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.568 3.432 12 O -0.534 6.534 13 N -0.712 5.712 14 C 0.121 3.879 15 H 0.108 0.892 16 C -0.135 4.135 17 C -0.077 4.077 18 H 0.100 0.900 19 C -0.054 4.054 20 C -0.111 4.111 21 C -0.087 4.087 22 C -0.095 4.095 23 Br -0.051 7.051 24 C -0.088 4.088 25 C -0.111 4.111 26 C -0.144 4.144 27 C 0.009 3.991 28 C -0.102 4.102 29 H 0.373 0.627 30 H 0.116 0.884 31 H -0.255 1.255 32 H -0.260 1.260 33 H 0.176 0.824 34 H 0.421 0.579 35 H 0.128 0.872 36 H 0.127 0.873 37 H 0.400 0.600 38 H 0.078 0.922 39 H 0.099 0.901 40 H 0.133 0.867 41 H 0.133 0.867 42 H 0.132 0.868 43 H 0.131 0.869 44 H 0.096 0.904 45 H 0.076 0.924 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.301 2.766 5.452 8.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.587 3.413 4 C -0.195 4.195 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.174 4.174 11 C 0.357 3.643 12 O -0.411 6.411 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.173 4.173 17 C -0.095 4.095 18 H 0.118 0.882 19 C -0.055 4.055 20 C -0.130 4.130 21 C -0.107 4.107 22 C -0.174 4.174 23 Br 0.034 6.966 24 C -0.108 4.108 25 C -0.129 4.129 26 C -0.183 4.183 27 C -0.010 4.010 28 C -0.107 4.107 29 H 0.220 0.780 30 H 0.134 0.866 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.193 0.807 34 H 0.259 0.741 35 H 0.146 0.854 36 H 0.145 0.855 37 H 0.235 0.765 38 H 0.097 0.903 39 H 0.118 0.882 40 H 0.151 0.849 41 H 0.151 0.849 42 H 0.150 0.850 43 H 0.149 0.851 44 H 0.115 0.885 45 H 0.095 0.905 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 4.669 2.783 4.246 6.898 hybrid contribution -0.574 0.093 1.625 1.725 sum 4.096 2.876 5.871 7.715 Atomic orbital electron populations 1.86644 1.17904 1.79871 1.48978 1.24371 0.83525 1.10061 0.97323 0.95195 0.91409 0.74126 0.80536 1.20703 1.08998 0.91930 0.97823 1.21759 1.01011 0.94454 0.89571 1.41739 1.54623 1.04150 1.18173 1.18439 0.99816 0.86510 0.94216 1.19662 1.05741 0.88856 1.01164 1.20573 0.96740 0.98314 0.92995 1.19523 1.08375 0.93225 0.96250 1.18176 0.77713 0.82796 0.85661 1.90802 1.44183 1.85924 1.20238 1.45555 1.64606 1.05234 1.21018 1.21829 0.94799 0.84380 0.97441 0.87445 1.23433 0.98046 0.96877 0.98934 1.21660 0.97376 0.91331 0.99155 0.88225 1.19841 0.96881 0.95384 0.93386 1.21051 0.98916 0.94021 0.99002 1.21148 0.98640 0.94582 0.96330 1.21857 1.06074 0.92270 0.97240 1.96777 1.89553 1.11560 1.98681 1.21146 0.97115 0.94886 0.97657 1.21082 1.00199 0.93987 0.97682 1.23587 0.96863 0.98430 0.99419 1.20707 0.92273 0.89162 0.98887 1.18912 1.04537 0.92927 0.94302 0.77954 0.86571 1.17975 1.18491 0.80692 0.74114 0.85440 0.85474 0.76474 0.90311 0.88215 0.84894 0.84890 0.84958 0.85148 0.88534 0.90497 0.84299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 36. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.05 12.88 -35.23 -0.45 -1.51 16 2 C -0.04 -0.01 3.06 36.01 0.11 0.10 16 3 Si 0.69 -1.12 30.82 -169.99 -5.24 -6.36 16 4 C -0.19 -0.05 5.58 -102.69 -0.57 -0.62 16 5 C 0.06 -0.12 10.43 -16.73 -0.17 -0.29 16 6 N -0.58 1.31 6.05 -10.61 -0.06 1.25 16 7 C 0.12 0.01 7.27 -83.96 -0.61 -0.60 16 8 C -0.13 0.15 10.00 -39.86 -0.40 -0.25 16 9 C -0.07 0.06 9.46 -39.54 -0.37 -0.31 16 10 C -0.17 -0.30 5.87 -104.97 -0.62 -0.92 16 11 C 0.57 1.63 7.76 -12.41 -0.10 1.53 16 12 O -0.53 -3.65 15.93 5.30 0.08 -3.56 16 13 N -0.71 0.36 5.21 -54.02 -0.28 0.08 16 14 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 15 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 16 C -0.13 0.33 7.29 -25.92 -0.19 0.14 16 17 C -0.08 0.18 3.86 -90.95 -0.35 -0.17 16 18 H 0.10 -0.33 8.10 -51.93 -0.42 -0.76 16 19 C -0.05 0.05 5.29 -104.62 -0.55 -0.50 16 20 C -0.11 0.07 8.62 -39.59 -0.34 -0.27 16 21 C -0.09 -0.03 9.79 -39.55 -0.39 -0.42 16 22 C -0.09 -0.11 6.22 -39.51 -0.25 -0.35 16 23 Br -0.05 -0.08 33.70 -68.01 -2.29 -2.37 16 24 C -0.09 -0.02 9.79 -39.55 -0.39 -0.41 16 25 C -0.11 0.08 9.71 -39.59 -0.38 -0.30 16 26 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 27 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 28 C -0.10 -0.19 6.34 -105.16 -0.67 -0.86 16 29 H 0.37 -0.43 8.70 45.56 0.40 -0.03 16 30 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 31 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 32 H -0.26 0.15 7.00 56.52 0.40 0.54 16 33 H 0.18 -0.81 6.27 -52.49 -0.33 -1.14 16 34 H 0.42 -2.21 8.96 -40.82 -0.37 -2.58 16 35 H 0.13 -0.45 8.06 -52.49 -0.42 -0.88 16 36 H 0.13 -0.50 6.36 -52.48 -0.33 -0.83 16 37 H 0.40 -1.28 6.70 -40.82 -0.27 -1.55 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.10 -0.25 7.73 -51.93 -0.40 -0.65 16 40 H 0.13 -0.29 6.64 -52.49 -0.35 -0.64 16 41 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 42 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 43 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 44 H 0.10 -0.15 6.30 -51.93 -0.33 -0.48 16 45 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.14 0.56 7.64 -52.49 -0.40 0.16 16 LS Contribution 403.61 15.07 6.08 6.08 Total: 0.00 -9.54 403.61 -14.60 -24.15 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -5.35 Total: -12.52 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -7.09 Total: -5.24 kcal Atomic # 7 Polarization: 1.67 SS G_CDS: -0.35 Total: 1.33 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -0.37 Total: -5.07 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.24 Total: -6.36 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.54 -14.60 -24.15 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.139 kcal (2) G-P(sol) polarization free energy of solvation -9.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.147 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.53 seconds