Wall clock time and date at job start Sat Mar 6 2021 11:13:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46998 * 2 1 4 4 C 1.50704 * 109.46969 * 120.00049 * 2 1 3 5 5 C 1.34188 * 126.53563 * 254.99684 * 4 2 1 6 6 N 1.36869 * 109.96259 * 180.02562 * 5 4 2 7 7 C 1.37397 * 109.98131 * 359.97438 * 6 5 4 8 8 C 1.39329 * 133.24901 * 180.02562 * 7 6 5 9 9 C 1.36352 * 120.23694 * 179.79476 * 8 7 6 10 10 C 1.40170 * 120.66885 * 0.43994 * 9 8 7 11 11 C 1.47653 * 119.97821 * 179.79644 * 10 9 8 12 12 O 1.21573 * 120.00351 * 179.72148 * 11 10 9 13 13 N 1.34783 * 119.99485 * 359.72174 * 11 10 9 14 14 C 1.46502 * 119.99683 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85025 * 23.80911 * 14 13 11 16 16 C 1.53779 * 113.61301 * 154.99921 * 14 13 11 17 17 C 1.53787 * 87.07963 * 89.11687 * 16 14 13 18 18 H 1.08994 * 113.61447 * 270.88515 * 17 16 14 19 19 C 1.50702 * 113.61150 * 139.98062 * 17 16 14 20 20 C 1.38242 * 119.98735 * 299.72237 * 19 17 16 21 21 C 1.38221 * 120.00756 * 179.76870 * 20 19 17 22 22 C 1.38336 * 119.98881 * 0.51210 * 21 20 19 23 23 Br 1.89093 * 120.01083 * 179.76415 * 22 21 20 24 24 C 1.38327 * 119.97735 * 359.74350 * 22 21 20 25 25 C 1.38223 * 119.99187 * 0.02562 * 24 22 21 26 26 C 1.53779 * 113.61564 * 252.49989 * 14 13 11 27 27 C 1.39197 * 120.05102 * 359.52039 * 10 9 8 28 28 C 1.39231 * 119.38936 * 0.25280 * 27 10 9 29 29 H 0.96702 * 113.99906 * 300.00303 * 1 2 3 30 30 H 1.09001 * 109.46676 * 239.99917 * 2 1 3 31 31 H 1.48506 * 109.99761 * 299.99945 * 3 2 1 32 32 H 1.48491 * 110.00210 * 61.31921 * 3 2 1 33 33 H 1.07997 * 125.01978 * 359.97438 * 5 4 2 34 34 H 0.96997 * 125.00403 * 180.02562 * 6 5 4 35 35 H 1.08001 * 119.88459 * 359.97289 * 8 7 6 36 36 H 1.08005 * 119.66680 * 180.23686 * 9 8 7 37 37 H 0.96996 * 119.99920 * 0.02562 * 13 11 10 38 38 H 1.08997 * 113.61646 * 334.57319 * 16 14 13 39 39 H 1.09000 * 113.61527 * 203.66590 * 16 14 13 40 40 H 1.07993 * 120.00032 * 0.02562 * 20 19 17 41 41 H 1.07992 * 120.00810 * 180.28028 * 21 20 19 42 42 H 1.08000 * 120.00266 * 179.97438 * 24 22 21 43 43 H 1.07997 * 119.99472 * 180.02562 * 25 24 22 44 44 H 1.09002 * 113.61557 * 156.33711 * 26 14 13 45 45 H 1.09004 * 113.61501 * 25.43131 * 26 14 13 46 46 H 1.07997 * 120.30269 * 180.23509 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4607 -0.1386 2.3229 6 7 2.8032 -1.1005 3.2344 7 6 2.4955 -2.3454 2.7413 8 6 2.6342 -3.6349 3.2504 9 6 2.2262 -4.7100 2.5176 10 6 1.6716 -4.5369 1.2420 11 6 1.2390 -5.7122 0.4599 12 8 0.7532 -5.5622 -0.6445 13 7 1.3827 -6.9513 0.9704 14 6 0.9530 -8.1174 0.1946 15 1 0.9292 -7.9267 -0.8783 16 6 1.6878 -9.4141 0.5735 17 6 0.5859 -9.6391 1.6223 18 1 0.8052 -9.1875 2.5898 19 6 0.1414 -11.0749 1.7323 20 6 -0.4000 -11.7167 0.6341 21 6 -0.8034 -13.0350 0.7332 22 6 -0.6751 -13.7089 1.9345 23 35 -1.2329 -15.5104 2.0726 24 6 -0.1382 -13.0646 3.0345 25 6 0.2693 -11.7477 2.9331 26 6 -0.3269 -8.7781 0.7333 27 6 1.5230 -3.2574 0.7143 28 6 1.9345 -2.1577 1.4625 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5614 2.4678 -1.2086 32 1 1.5879 2.4585 1.2241 33 1 2.5972 0.9236 2.4620 34 1 3.2034 -0.9285 4.1011 35 1 3.0637 -3.7834 4.2301 36 1 2.3345 -5.7053 2.9228 37 1 1.7699 -7.0709 1.8516 38 1 2.6743 -9.2466 1.0057 39 1 1.6937 -10.1606 -0.2207 40 1 -0.5040 -11.1893 -0.3025 41 1 -1.2221 -13.5377 -0.1259 42 1 -0.0382 -13.5902 3.9727 43 1 0.6889 -11.2448 3.7918 44 1 -0.8718 -9.3508 -0.0172 45 1 -0.9668 -8.0971 1.2945 46 1 1.0927 -3.1191 -0.2665 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:06 Heat of formation + Delta-G solvation = 54.497908 kcal Electronic energy + Delta-G solvation = -30536.073942 eV Core-core repulsion = 26211.643961 eV Total energy + Delta-G solvation = -4324.429981 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.46454 -41.61020 -40.46391 -38.94011 -38.02568 -37.44041 -34.77911 -33.28897 -33.04998 -32.03447 -30.95539 -30.57453 -30.04155 -26.70033 -26.49596 -26.17483 -24.70691 -23.81212 -23.47325 -22.40448 -21.72663 -20.80590 -20.15309 -19.37762 -18.55011 -17.94731 -17.55567 -17.30761 -16.95499 -16.55345 -16.26023 -16.16233 -15.98910 -15.71629 -15.64005 -15.22828 -15.07645 -14.86933 -14.77405 -14.67305 -14.48255 -14.29053 -14.08117 -13.75347 -13.56946 -13.49931 -13.43537 -12.90442 -12.61038 -12.51253 -12.39721 -12.13681 -12.04809 -11.85639 -11.79385 -11.41251 -11.28383 -11.21032 -11.09619 -10.80062 -10.48021 -10.15520 -9.99996 -9.50689 -9.32300 -8.80969 -4.86668 -0.15177 0.06039 0.21381 0.32945 0.65828 1.35538 1.52029 1.61644 1.83033 2.01654 2.06131 2.13131 2.56981 2.88810 3.45089 3.52301 3.61840 3.65500 3.68854 3.76218 3.83414 3.84937 3.91602 3.95755 3.97070 4.14341 4.21058 4.36688 4.37976 4.42111 4.46839 4.54544 4.60834 4.65218 4.71789 4.78055 4.79817 4.87281 4.90477 5.01671 5.02430 5.05622 5.14415 5.24229 5.25255 5.27823 5.35512 5.47188 5.53348 5.58448 5.66001 5.84598 5.99186 6.50598 6.55934 6.62096 7.18905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.063 4.063 3 Si 0.787 3.213 4 C -0.217 4.217 5 C 0.081 3.919 6 N -0.571 5.571 7 C 0.112 3.888 8 C -0.125 4.125 9 C -0.066 4.066 10 C -0.179 4.179 11 C 0.563 3.437 12 O -0.588 6.588 13 N -0.693 5.693 14 C 0.112 3.888 15 H 0.083 0.917 16 C -0.122 4.122 17 C -0.065 4.065 18 H 0.119 0.881 19 C -0.056 4.056 20 C -0.116 4.116 21 C -0.100 4.100 22 C -0.110 4.110 23 Br -0.064 7.064 24 C -0.099 4.099 25 C -0.111 4.111 26 C -0.144 4.144 27 C -0.022 4.022 28 C -0.128 4.128 29 H 0.384 0.616 30 H 0.100 0.900 31 H -0.311 1.311 32 H -0.259 1.259 33 H 0.209 0.791 34 H 0.439 0.561 35 H 0.162 0.838 36 H 0.162 0.838 37 H 0.416 0.584 38 H 0.092 0.908 39 H 0.101 0.899 40 H 0.144 0.856 41 H 0.136 0.864 42 H 0.140 0.860 43 H 0.154 0.846 44 H 0.097 0.903 45 H 0.067 0.933 46 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.193 3.434 8.760 11.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.171 4.171 3 Si 0.690 3.310 4 C -0.224 4.224 5 C -0.047 4.047 6 N -0.175 5.175 7 C 0.002 3.998 8 C -0.145 4.145 9 C -0.085 4.085 10 C -0.183 4.183 11 C 0.353 3.647 12 O -0.469 6.469 13 N -0.345 5.345 14 C 0.007 3.993 15 H 0.101 0.899 16 C -0.160 4.160 17 C -0.083 4.083 18 H 0.137 0.863 19 C -0.056 4.056 20 C -0.134 4.134 21 C -0.120 4.120 22 C -0.190 4.190 23 Br 0.022 6.978 24 C -0.119 4.119 25 C -0.129 4.129 26 C -0.183 4.183 27 C -0.041 4.041 28 C -0.132 4.132 29 H 0.233 0.767 30 H 0.118 0.882 31 H -0.239 1.239 32 H -0.184 1.184 33 H 0.225 0.775 34 H 0.280 0.720 35 H 0.180 0.820 36 H 0.179 0.821 37 H 0.255 0.745 38 H 0.111 0.889 39 H 0.120 0.880 40 H 0.162 0.838 41 H 0.154 0.846 42 H 0.158 0.842 43 H 0.171 0.829 44 H 0.115 0.885 45 H 0.085 0.915 46 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 6.589 3.396 7.636 10.642 hybrid contribution -1.192 -0.102 0.545 1.314 sum 5.398 3.294 8.182 10.340 Atomic orbital electron populations 1.86600 1.19428 1.80617 1.49915 1.24767 0.82702 1.12428 0.97155 0.94100 0.89623 0.70042 0.77237 1.20762 1.11191 0.91551 0.98924 1.22167 0.98480 0.95711 0.88303 1.41764 1.53770 1.03185 1.18743 1.18645 0.99673 0.87895 0.93606 1.20072 1.04309 0.87954 1.02174 1.20885 0.95831 1.00277 0.91544 1.19570 1.09140 0.92116 0.97520 1.18488 0.77103 0.84036 0.85118 1.90768 1.46844 1.86726 1.22596 1.45399 1.63437 1.04221 1.21463 1.21876 0.96164 0.84982 0.96303 0.89917 1.23373 0.98521 0.95230 0.98890 1.21648 0.96528 0.90279 0.99816 0.86256 1.20009 0.96477 0.95917 0.93234 1.21247 0.98632 0.93738 0.99809 1.21288 0.99130 0.95158 0.96382 1.21983 1.07067 0.91910 0.97994 1.96751 1.89748 1.12635 1.98706 1.21339 0.97250 0.95546 0.97726 1.21360 0.99569 0.93573 0.98432 1.23578 0.96576 0.98457 0.99687 1.20599 0.94383 0.90790 0.98360 1.19176 1.05152 0.93474 0.95421 0.76710 0.88240 1.23949 1.18420 0.77473 0.71996 0.82013 0.82068 0.74537 0.88917 0.88044 0.83809 0.84597 0.84250 0.82860 0.88468 0.91460 0.87568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.74 12.88 -148.98 -1.92 -5.66 16 2 C -0.06 -0.15 3.06 71.24 0.22 0.07 16 3 Si 0.79 -2.54 30.82 68.60 2.11 -0.43 16 4 C -0.22 -0.29 5.58 -18.61 -0.10 -0.39 16 5 C 0.08 -0.45 10.43 82.98 0.87 0.42 16 6 N -0.57 3.83 6.05 -187.49 -1.13 2.69 16 7 C 0.11 -0.09 7.27 39.19 0.28 0.20 16 8 C -0.12 0.55 10.00 22.09 0.22 0.77 16 9 C -0.07 0.20 9.46 22.30 0.21 0.41 16 10 C -0.18 -0.94 5.87 -20.09 -0.12 -1.05 16 11 C 0.56 4.46 7.76 86.73 0.67 5.14 16 12 O -0.59 -10.44 15.93 -3.95 -0.06 -10.50 16 13 N -0.69 0.53 5.21 -443.09 -2.31 -1.78 16 14 C 0.11 -0.09 4.32 45.52 0.20 0.11 16 15 H 0.08 0.39 7.46 -2.39 -0.02 0.37 16 16 C -0.12 0.73 7.29 31.12 0.23 0.96 16 17 C -0.06 0.40 3.86 -11.01 -0.04 0.36 16 18 H 0.12 -1.16 8.10 -2.39 -0.02 -1.18 16 19 C -0.06 0.17 5.29 -19.86 -0.11 0.06 16 20 C -0.12 0.17 8.62 22.27 0.19 0.36 16 21 C -0.10 -0.11 9.79 22.29 0.22 0.11 16 22 C -0.11 -0.28 6.22 22.31 0.14 -0.14 16 23 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.92 16 24 C -0.10 -0.01 9.79 22.29 0.22 0.21 16 25 C -0.11 0.33 9.71 22.27 0.22 0.54 16 26 C -0.14 0.34 7.25 31.12 0.23 0.57 16 27 C -0.02 -0.20 9.64 22.74 0.22 0.02 16 28 C -0.13 -0.67 6.34 -20.21 -0.13 -0.80 16 29 H 0.38 -0.18 8.70 -74.06 -0.64 -0.82 16 30 H 0.10 0.43 7.96 -2.39 -0.02 0.41 16 31 H -0.31 -1.89 7.11 99.48 0.71 -1.18 16 32 H -0.26 0.86 7.00 99.48 0.70 1.55 16 33 H 0.21 -2.60 6.27 -2.91 -0.02 -2.62 16 34 H 0.44 -6.03 8.96 -92.71 -0.83 -6.86 16 35 H 0.16 -1.83 8.06 -2.91 -0.02 -1.86 16 36 H 0.16 -1.75 6.36 -2.91 -0.02 -1.77 16 37 H 0.42 -3.31 6.70 -92.71 -0.62 -3.93 16 38 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 39 H 0.10 -0.59 7.73 -2.39 -0.02 -0.61 16 40 H 0.14 -0.62 6.64 -2.91 -0.02 -0.64 16 41 H 0.14 -0.06 8.06 -2.91 -0.02 -0.08 16 42 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 43 H 0.15 -1.22 8.06 -2.91 -0.02 -1.25 16 44 H 0.10 -0.25 6.30 -2.39 -0.02 -0.26 16 45 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 46 H 0.11 1.53 7.64 -2.91 -0.02 1.51 16 Total: 0.00 -27.86 403.61 -1.16 -29.02 By element: Atomic # 1 Polarization: -19.33 SS G_CDS: -0.99 Total: -20.33 kcal Atomic # 6 Polarization: 4.07 SS G_CDS: 3.83 Total: 7.90 kcal Atomic # 7 Polarization: 4.36 SS G_CDS: -3.44 Total: 0.91 kcal Atomic # 8 Polarization: -14.17 SS G_CDS: -1.98 Total: -16.16 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: 2.11 Total: -0.43 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.92 kcal Total: -27.86 -1.16 -29.02 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.522 kcal (2) G-P(sol) polarization free energy of solvation -27.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.164 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.024 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds