Wall clock time and date at job start Sat Mar 6 2021 11:13:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86299 * 109.47130 * 2 1 4 4 C 1.50700 * 109.46597 * 119.99665 * 2 1 3 5 5 C 1.38557 * 120.32226 * 245.00058 * 4 2 1 6 6 N 1.31528 * 120.90382 * 180.02562 * 5 4 2 7 7 C 1.32717 * 121.63949 * 359.97438 * 6 5 4 8 8 C 1.48176 * 119.72075 * 179.97438 * 7 6 5 9 9 O 1.21516 * 119.99753 * 180.02562 * 8 7 6 10 10 N 1.34777 * 119.99896 * 0.02562 * 8 7 6 11 11 C 1.46496 * 119.99614 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.85038 * 336.18946 * 11 10 8 13 13 C 1.53782 * 113.61660 * 107.50270 * 11 10 8 14 14 C 1.53775 * 87.08166 * 89.11066 * 13 11 10 15 15 H 1.09000 * 113.69263 * 270.87145 * 14 13 11 16 16 C 1.50706 * 113.61178 * 139.98282 * 14 13 11 17 17 C 1.38241 * 119.98997 * 322.22486 * 16 14 13 18 18 C 1.38216 * 120.00906 * 179.76362 * 17 16 14 19 19 C 1.38327 * 119.98882 * 0.51538 * 18 17 16 20 20 Br 1.89100 * 120.00806 * 179.76208 * 19 18 17 21 21 C 1.38320 * 119.97955 * 359.74228 * 19 18 17 22 22 C 1.38217 * 119.99204 * 359.97438 * 21 19 18 23 23 C 1.53780 * 87.08305 * 25.43555 * 14 13 11 24 24 C 1.39314 * 120.55623 * 0.27924 * 7 6 5 25 25 C 1.38586 * 119.05758 * 359.47165 * 24 7 6 26 26 H 0.96695 * 114.00428 * 300.00666 * 1 2 3 27 27 H 1.08997 * 109.47289 * 239.99580 * 2 1 3 28 28 H 1.48491 * 109.99953 * 178.67972 * 3 2 1 29 29 H 1.48505 * 109.99657 * 299.99827 * 3 2 1 30 30 H 1.07997 * 119.54882 * 0.02562 * 5 4 2 31 31 H 0.96996 * 119.99887 * 359.97438 * 10 8 7 32 32 H 1.09003 * 113.61455 * 203.66352 * 13 11 10 33 33 H 1.09005 * 113.61106 * 334.55930 * 13 11 10 34 34 H 1.07998 * 119.99587 * 0.02607 * 17 16 14 35 35 H 1.08001 * 120.00302 * 180.23073 * 18 17 16 36 36 H 1.08006 * 120.00190 * 179.97438 * 21 19 18 37 37 H 1.07998 * 119.99443 * 180.02562 * 22 21 19 38 38 H 1.09005 * 113.61106 * 220.01819 * 23 14 13 39 39 H 1.08994 * 113.68951 * 89.12411 * 23 14 13 40 40 H 1.08000 * 120.46591 * 179.70254 * 24 7 6 41 41 H 1.07995 * 120.75735 * 180.24684 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6409 -0.0171 2.1978 6 7 3.0850 -0.6257 3.2759 7 6 2.8734 -1.9197 3.4819 8 6 3.3935 -2.5624 4.7115 9 8 3.2031 -3.7469 4.9050 10 7 4.0777 -1.8333 5.6153 11 6 4.5913 -2.4687 6.8313 12 1 4.0407 -3.3692 7.1033 13 6 6.1179 -2.6541 6.8318 14 6 6.2089 -1.2539 7.4609 15 1 6.2692 -0.4480 6.7294 16 6 7.2548 -1.1439 8.5403 17 6 7.4624 -2.1971 9.4113 18 6 8.4249 -2.0986 10.3983 19 6 9.1733 -0.9417 10.5212 20 35 10.4857 -0.8037 11.8756 21 6 8.9616 0.1139 9.6528 22 6 8.0028 0.0123 8.6624 23 6 4.7887 -1.4904 8.0013 24 6 2.1720 -2.6800 2.5488 25 6 1.6877 -2.0638 1.4058 26 1 -0.3934 0.4418 0.7649 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7703 0.0322 29 1 1.5615 2.4678 -1.2086 30 1 2.8321 1.0374 2.0646 31 1 4.2299 -0.8879 5.4606 32 1 6.4607 -3.4520 7.4906 33 1 6.5509 -2.7130 5.8331 34 1 6.8753 -3.0987 9.3179 35 1 8.5896 -2.9229 11.0764 36 1 9.5454 1.0175 9.7487 37 1 7.8378 0.8363 7.9841 38 1 4.1485 -0.6098 7.9468 39 1 4.7666 -1.9699 8.9798 40 1 2.0048 -3.7339 2.7156 41 1 1.1369 -2.6261 0.6664 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:13 Heat of formation + Delta-G solvation = 29.718435 kcal Electronic energy + Delta-G solvation = -25800.442608 eV Core-core repulsion = 21886.928008 eV Total energy + Delta-G solvation = -3913.514599 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.041 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.04082 -41.39671 -40.16099 -38.86370 -37.98013 -34.89218 -33.82735 -33.10483 -32.81899 -32.09702 -30.37400 -28.02436 -26.85553 -25.97867 -25.10382 -24.19628 -23.75564 -22.50801 -21.99674 -20.24839 -19.36721 -18.71812 -18.04019 -17.76728 -16.96208 -16.79313 -16.53092 -16.40028 -16.33453 -16.06878 -15.98572 -15.35668 -15.21763 -14.86183 -14.61850 -14.46997 -14.43973 -14.39646 -14.23017 -13.66143 -13.61031 -13.50201 -12.95505 -12.69247 -12.49587 -12.21749 -12.10688 -11.97679 -11.45957 -11.41548 -11.31417 -11.21752 -11.13016 -10.74249 -10.69189 -10.38289 -10.11975 -10.05083 -9.53329 -5.22204 -0.63489 -0.00624 0.02001 0.26756 0.67828 1.05499 1.45189 1.57137 1.81577 1.89869 2.50822 2.63467 2.86773 3.21226 3.31490 3.37670 3.51646 3.54351 3.60389 3.67681 3.72724 3.83022 3.86149 3.87009 4.05393 4.07027 4.25048 4.26615 4.34213 4.46919 4.51156 4.59007 4.65188 4.68584 4.79067 4.81249 4.88708 4.90351 4.93767 5.01213 5.17988 5.18511 5.28990 5.42845 5.54504 5.75854 6.25759 6.33861 6.56255 7.07825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.150 4.150 5 C 0.104 3.896 6 N -0.453 5.453 7 C 0.080 3.920 8 C 0.576 3.424 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.117 3.883 12 H 0.108 0.892 13 C -0.143 4.143 14 C -0.077 4.077 15 H 0.102 0.898 16 C -0.055 4.055 17 C -0.112 4.112 18 C -0.087 4.087 19 C -0.095 4.095 20 Br -0.051 7.051 21 C -0.088 4.088 22 C -0.110 4.110 23 C -0.134 4.134 24 C -0.107 4.107 25 C -0.053 4.053 26 H 0.381 0.619 27 H 0.120 0.880 28 H -0.252 1.252 29 H -0.249 1.249 30 H 0.165 0.835 31 H 0.413 0.587 32 H 0.098 0.902 33 H 0.076 0.924 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.080 0.920 39 H 0.100 0.900 40 H 0.153 0.847 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.969 3.516 -0.581 4.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.178 4.178 3 Si 0.587 3.413 4 C -0.152 4.152 5 C -0.055 4.055 6 N -0.164 5.164 7 C -0.058 4.058 8 C 0.361 3.639 9 O -0.401 6.401 10 N -0.345 5.345 11 C 0.012 3.988 12 H 0.126 0.874 13 C -0.182 4.182 14 C -0.095 4.095 15 H 0.120 0.880 16 C -0.055 4.055 17 C -0.130 4.130 18 C -0.107 4.107 19 C -0.174 4.174 20 Br 0.034 6.966 21 C -0.108 4.108 22 C -0.129 4.129 23 C -0.172 4.172 24 C -0.128 4.128 25 C -0.078 4.078 26 H 0.229 0.771 27 H 0.138 0.862 28 H -0.177 1.177 29 H -0.173 1.173 30 H 0.181 0.819 31 H 0.249 0.751 32 H 0.116 0.884 33 H 0.095 0.905 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.099 0.901 39 H 0.119 0.881 40 H 0.171 0.829 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.557 3.439 -0.236 3.492 hybrid contribution -0.451 -0.584 -1.181 1.392 sum -1.008 2.855 -1.416 3.342 Atomic orbital electron populations 1.86545 1.16551 1.81659 1.49342 1.25057 0.85616 1.10448 0.96727 0.94837 0.81246 0.77229 0.88003 1.21665 0.99425 0.95866 0.98251 1.22592 0.94258 0.99723 0.88922 1.67503 1.18087 1.09481 1.21327 1.21139 0.98637 0.90280 0.95727 1.17843 0.77874 0.85938 0.82254 1.90825 1.57931 1.14757 1.76587 1.45484 1.54972 1.13774 1.20245 1.21918 0.94949 0.97554 0.84410 0.87352 1.23578 0.95945 0.96531 1.02139 1.21664 0.93097 0.98927 0.95814 0.88029 1.19838 0.96092 0.93729 0.95859 1.21040 0.98111 0.99046 0.94833 1.21141 0.94834 0.96440 0.98303 1.21856 0.99311 0.98084 0.98174 1.96779 1.52083 1.98567 1.49135 1.21150 0.97851 0.97751 0.94026 1.21095 0.95654 0.97870 0.98273 1.23425 0.95409 1.00002 0.98360 1.22234 0.95284 1.02320 0.92940 1.21570 0.95761 0.93744 0.96769 0.77122 0.86224 1.17704 1.17318 0.81883 0.75085 0.88416 0.90511 0.84929 0.84896 0.84932 0.85080 0.90137 0.88114 0.82927 0.83444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.91 12.84 -35.23 -0.45 0.46 16 2 C -0.07 0.16 2.82 36.01 0.10 0.26 16 3 Si 0.69 -2.07 29.83 -169.99 -5.07 -7.14 16 4 C -0.15 0.24 5.37 -104.36 -0.56 -0.32 16 5 C 0.10 -0.16 9.84 -17.56 -0.17 -0.33 16 6 N -0.45 -0.04 9.54 -9.79 -0.09 -0.13 16 7 C 0.08 0.09 6.75 -83.00 -0.56 -0.47 16 8 C 0.58 1.23 7.81 -12.18 -0.10 1.13 16 9 O -0.53 -2.68 15.92 5.35 0.09 -2.60 16 10 N -0.69 0.25 5.25 -53.85 -0.28 -0.03 16 11 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 12 H 0.11 0.02 7.46 -51.93 -0.39 -0.36 16 13 C -0.14 0.23 7.25 -25.92 -0.19 0.04 16 14 C -0.08 0.18 3.86 -90.96 -0.35 -0.17 16 15 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 16 C -0.05 0.05 5.29 -104.62 -0.55 -0.50 16 17 C -0.11 0.09 8.60 -39.59 -0.34 -0.25 16 18 C -0.09 -0.02 9.79 -39.56 -0.39 -0.40 16 19 C -0.09 -0.10 6.22 -39.52 -0.25 -0.34 16 20 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 21 C -0.09 -0.02 9.79 -39.56 -0.39 -0.41 16 22 C -0.11 0.08 9.71 -39.59 -0.38 -0.31 16 23 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 24 C -0.11 -0.03 9.63 -39.05 -0.38 -0.41 16 25 C -0.05 0.05 9.83 -39.31 -0.39 -0.33 16 26 H 0.38 -2.09 8.70 45.56 0.40 -1.70 16 27 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 0.18 7.11 56.52 0.40 0.58 16 29 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 30 H 0.16 -0.66 4.92 -52.49 -0.26 -0.92 16 31 H 0.41 -0.73 8.03 -40.82 -0.33 -1.05 16 32 H 0.10 -0.21 6.32 -51.93 -0.33 -0.53 16 33 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 34 H 0.13 -0.33 6.67 -52.49 -0.35 -0.68 16 35 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 36 H 0.13 -0.11 8.06 -52.48 -0.42 -0.54 16 37 H 0.13 -0.33 8.05 -52.49 -0.42 -0.75 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.10 -0.29 7.72 -51.93 -0.40 -0.69 16 40 H 0.15 0.00 7.64 -52.49 -0.40 -0.40 16 41 H 0.15 -0.34 8.06 -52.49 -0.42 -0.76 16 LS Contribution 367.51 15.07 5.54 5.54 Total: 0.00 -7.35 367.51 -12.56 -19.91 By element: Atomic # 1 Polarization: -5.95 SS G_CDS: -4.63 Total: -10.57 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -5.37 Total: -3.07 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.38 Total: -0.17 kcal Atomic # 8 Polarization: -1.78 SS G_CDS: -0.37 Total: -2.14 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: -5.07 Total: -7.14 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -7.35 -12.56 -19.91 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.632 kcal (2) G-P(sol) polarization free energy of solvation -7.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.913 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds