Wall clock time and date at job start Sat Mar 6 2021 11:13:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.34851 * 125.90145 * 150.02340 * 4 2 1 6 6 C 1.40941 * 107.46721 * 179.97438 * 5 4 2 7 7 C 1.34839 * 107.47151 * 359.97438 * 6 5 4 8 8 N 1.36570 * 125.89877 * 329.70689 * 4 2 1 9 9 C 1.40203 * 125.67034 * 0.02562 * 8 4 2 10 10 C 1.38827 * 120.06036 * 309.71916 * 9 8 4 11 11 C 1.38126 * 119.92788 * 179.69910 * 10 9 8 12 12 C 1.38277 * 120.06580 * 0.60297 * 11 10 9 13 13 C 1.50706 * 119.93099 * 179.70244 * 12 11 10 14 14 C 1.50703 * 109.46511 * 269.97216 * 13 12 11 15 15 O 1.21275 * 120.00431 * 0.02562 * 14 13 12 16 16 N 1.34774 * 119.99583 * 179.97438 * 14 13 12 17 17 C 1.46500 * 120.00197 * 179.97438 * 16 14 13 18 18 H 1.09009 * 112.84516 * 23.80864 * 17 16 14 19 19 C 1.53781 * 113.61614 * 154.99966 * 17 16 14 20 20 C 1.53784 * 87.07887 * 89.12355 * 19 17 16 21 21 H 1.09001 * 113.61507 * 270.88683 * 20 19 17 22 22 C 1.50698 * 113.61576 * 139.98018 * 20 19 17 23 23 C 1.38238 * 119.99216 * 299.72193 * 22 20 19 24 24 C 1.38219 * 120.01073 * 179.76883 * 23 22 20 25 25 C 1.38329 * 119.98704 * 0.50544 * 24 23 22 26 26 Br 1.89103 * 120.00733 * 179.76787 * 25 24 23 27 27 C 1.38328 * 119.98142 * 359.75161 * 25 24 23 28 28 C 1.38220 * 119.98904 * 359.97438 * 27 25 24 29 29 C 1.53779 * 113.62098 * 252.50326 * 17 16 14 30 30 C 1.38274 * 120.13408 * 359.67537 * 12 11 10 31 31 C 1.38127 * 120.06398 * 0.02562 * 30 12 11 32 32 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 33 33 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 34 34 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 35 35 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 36 36 H 1.07995 * 126.26406 * 359.93622 * 5 4 2 37 37 H 1.08006 * 126.26052 * 179.97438 * 6 5 4 38 38 H 1.08000 * 125.89990 * 179.97438 * 7 6 5 39 39 H 1.07993 * 120.03755 * 359.97438 * 10 9 8 40 40 H 1.08004 * 119.96597 * 180.29910 * 11 10 9 41 41 H 1.08996 * 109.47400 * 29.97249 * 13 12 11 42 42 H 1.09002 * 109.46980 * 149.97862 * 13 12 11 43 43 H 0.97003 * 120.00511 * 0.02562 * 16 14 13 44 44 H 1.09002 * 113.61586 * 203.66351 * 19 17 16 45 45 H 1.08998 * 113.61414 * 334.57561 * 19 17 16 46 46 H 1.08003 * 119.99185 * 0.02562 * 23 22 20 47 47 H 1.07994 * 120.00762 * 180.28005 * 24 23 22 48 48 H 1.07995 * 120.00213 * 180.02562 * 27 25 24 49 49 H 1.08001 * 119.99430 * 180.02562 * 28 27 25 50 50 H 1.09006 * 113.61095 * 25.43067 * 29 17 16 51 51 H 1.08997 * 113.61852 * 156.33043 * 29 17 16 52 52 H 1.07999 * 119.96842 * 180.02562 * 30 12 11 53 53 H 1.07993 * 120.03119 * 179.97438 * 31 30 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 3.0870 -0.4527 -1.8758 6 6 3.1690 -1.3406 -2.9673 7 6 2.0609 -2.1085 -2.9487 8 7 1.2977 -1.7303 -1.8811 9 6 0.0669 -2.2935 -1.5155 10 6 -0.1497 -2.7017 -0.2064 11 6 -1.3655 -3.2505 0.1521 12 6 -2.3619 -3.4049 -0.7941 13 6 -3.6849 -4.0102 -0.4011 14 6 -3.6276 -5.5049 -0.5846 15 8 -2.6125 -6.0272 -0.9938 16 7 -4.7043 -6.2613 -0.2931 17 6 -4.6490 -7.7142 -0.4720 18 1 -3.6326 -8.1066 -0.4371 19 6 -5.6370 -8.4830 0.4212 20 6 -6.6620 -8.3288 -0.7148 21 1 -7.2536 -7.4157 -0.6481 22 6 -7.5040 -9.5583 -0.9391 23 6 -6.9025 -10.7546 -1.2827 24 6 -7.6740 -11.8836 -1.4839 25 6 -9.0492 -11.8138 -1.3516 26 35 -10.1059 -13.3566 -1.6331 27 6 -9.6512 -10.6153 -1.0129 28 6 -8.8783 -9.4882 -0.8064 29 6 -5.4650 -8.2186 -1.6739 30 6 -2.1471 -3.0045 -2.1001 31 6 -0.9355 -2.4493 -2.4632 32 1 -0.3934 0.4416 -0.7651 33 1 1.7924 -0.5138 0.8900 34 1 1.5877 2.4585 -1.2243 35 1 1.5613 2.4680 1.2084 36 1 3.8159 0.2971 -1.6061 37 1 3.9725 -1.3957 -3.6870 38 1 1.8199 -2.8899 -3.6542 39 1 0.6300 -2.5863 0.5318 40 1 -1.5363 -3.5639 1.1715 41 1 -3.8937 -3.7801 0.6437 42 1 -4.4743 -3.5970 -1.0290 43 1 -5.5162 -5.8436 0.0346 44 1 -5.3441 -9.5163 0.6076 45 1 -5.9099 -7.9485 1.3311 46 1 -5.8291 -10.8079 -1.3900 47 1 -7.2037 -12.8192 -1.7479 48 1 -10.7247 -10.5606 -0.9091 49 1 -9.3482 -8.5525 -0.5416 50 1 -5.5991 -7.4706 -2.4554 51 1 -5.1251 -9.1795 -2.0602 52 1 -2.9273 -3.1259 -2.8368 53 1 -0.7682 -2.1372 -3.4834 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13287746.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:24 Heat of formation + Delta-G solvation = 81.473577 kcal Electronic energy + Delta-G solvation = -35935.874201 eV Core-core repulsion = 31173.312595 eV Total energy + Delta-G solvation = -4762.561606 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 467.088 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.70694 -41.64864 -40.67962 -39.73499 -38.73399 -37.85695 -34.86776 -34.66825 -33.06971 -32.16558 -32.06062 -31.73449 -31.04154 -30.32454 -27.92647 -26.70602 -26.07655 -25.77770 -23.99540 -23.98183 -23.44365 -22.38042 -21.66484 -21.35269 -20.65064 -20.12792 -19.32566 -18.42936 -17.73047 -17.59493 -17.20342 -16.98419 -16.64419 -16.36713 -16.21548 -16.10140 -15.85707 -15.81614 -15.30306 -15.24570 -15.10024 -14.78408 -14.65641 -14.51057 -14.48215 -14.33516 -14.28152 -14.14542 -13.94276 -13.55424 -13.45079 -13.29741 -13.19168 -12.98149 -12.89246 -12.59768 -12.41507 -12.40470 -12.11375 -12.04667 -11.94035 -11.86418 -11.42002 -11.29878 -11.22096 -11.04066 -10.91005 -10.30690 -10.08823 -10.01317 -9.98461 -9.52230 -9.15920 -9.04319 -4.89868 -0.01892 0.04092 0.30742 0.34679 0.64173 1.06431 1.40843 1.61317 1.66102 1.83400 1.99516 2.09816 2.14811 2.55065 2.72128 3.23568 3.45669 3.60981 3.64588 3.66419 3.69006 3.75628 3.82230 3.87394 3.93641 3.94910 4.00611 4.13044 4.19767 4.21612 4.31280 4.34464 4.40699 4.47767 4.51849 4.54628 4.62391 4.64545 4.66112 4.70045 4.76757 4.82023 4.87601 4.90649 4.95594 5.01318 5.04311 5.14763 5.18376 5.21030 5.22304 5.24079 5.27640 5.37319 5.49327 5.51571 5.66058 5.78661 5.82708 5.93766 6.19097 6.35497 6.49132 6.55200 7.26933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.059 4.059 3 Si 0.801 3.199 4 C -0.027 4.027 5 C -0.193 4.193 6 C -0.199 4.199 7 C -0.025 4.025 8 N -0.399 5.399 9 C 0.112 3.888 10 C -0.096 4.096 11 C -0.098 4.098 12 C -0.068 4.068 13 C -0.097 4.097 14 C 0.516 3.484 15 O -0.579 6.579 16 N -0.701 5.701 17 C 0.116 3.884 18 H 0.080 0.920 19 C -0.125 4.125 20 C -0.065 4.065 21 H 0.120 0.880 22 C -0.056 4.056 23 C -0.116 4.116 24 C -0.100 4.100 25 C -0.111 4.111 26 Br -0.064 7.064 27 C -0.099 4.099 28 C -0.112 4.112 29 C -0.143 4.143 30 C -0.097 4.097 31 C -0.129 4.129 32 H 0.378 0.622 33 H 0.124 0.876 34 H -0.295 1.295 35 H -0.293 1.293 36 H 0.172 0.828 37 H 0.156 0.844 38 H 0.171 0.829 39 H 0.118 0.882 40 H 0.138 0.862 41 H 0.132 0.868 42 H 0.134 0.866 43 H 0.419 0.581 44 H 0.097 0.903 45 H 0.090 0.910 46 H 0.144 0.856 47 H 0.136 0.864 48 H 0.139 0.861 49 H 0.153 0.847 50 H 0.070 0.930 51 H 0.093 0.907 52 H 0.144 0.856 53 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.602 3.186 2.129 4.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.167 4.167 3 Si 0.705 3.295 4 C -0.136 4.136 5 C -0.217 4.217 6 C -0.223 4.223 7 C -0.153 4.153 8 N -0.072 5.072 9 C 0.022 3.978 10 C -0.115 4.115 11 C -0.117 4.117 12 C -0.069 4.069 13 C -0.136 4.136 14 C 0.304 3.696 15 O -0.458 6.458 16 N -0.353 5.353 17 C 0.010 3.990 18 H 0.098 0.902 19 C -0.163 4.163 20 C -0.083 4.083 21 H 0.138 0.862 22 C -0.057 4.057 23 C -0.134 4.134 24 C -0.120 4.120 25 C -0.190 4.190 26 Br 0.022 6.978 27 C -0.119 4.119 28 C -0.130 4.130 29 C -0.182 4.182 30 C -0.116 4.116 31 C -0.149 4.149 32 H 0.226 0.774 33 H 0.141 0.859 34 H -0.222 1.222 35 H -0.220 1.220 36 H 0.189 0.811 37 H 0.174 0.826 38 H 0.188 0.812 39 H 0.136 0.864 40 H 0.156 0.844 41 H 0.150 0.850 42 H 0.152 0.848 43 H 0.256 0.744 44 H 0.115 0.885 45 H 0.109 0.891 46 H 0.162 0.838 47 H 0.154 0.846 48 H 0.157 0.843 49 H 0.171 0.829 50 H 0.088 0.912 51 H 0.111 0.889 52 H 0.162 0.838 53 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.692 2.600 2.379 4.435 hybrid contribution -1.076 -0.232 -0.677 1.293 sum -3.768 2.368 1.702 4.765 Atomic orbital electron populations 1.86591 1.18099 1.80022 1.49615 1.25046 0.83561 1.11863 0.96255 0.93476 0.90023 0.69897 0.76148 1.21291 0.96822 0.95380 1.00150 1.21064 0.97984 1.04563 0.98083 1.21236 0.99530 0.99653 1.01850 1.22306 0.94147 1.04628 0.94178 1.41583 1.15442 1.27015 1.23153 1.17808 0.85016 1.00224 0.94703 1.20900 0.98284 0.97799 0.94551 1.21045 0.92157 0.98163 1.00321 1.19574 0.95812 0.97968 0.93518 1.20758 0.96244 0.89701 1.06937 1.20991 0.82567 0.90033 0.76016 1.90752 1.32889 1.75401 1.46802 1.45572 1.16170 1.06397 1.67186 1.21788 0.99543 0.80636 0.97067 0.90182 1.23367 0.94049 1.01531 0.97355 1.21653 0.93940 0.95860 0.96879 0.86245 1.20035 0.93905 0.95105 0.96644 1.21242 1.00899 0.91738 0.99559 1.21292 0.91685 1.00114 0.98893 1.21986 0.94950 0.93222 1.08827 1.96755 1.69493 1.35830 1.95753 1.21342 1.01177 0.91302 0.98080 1.21365 0.93214 0.98864 0.99579 1.23553 0.95440 1.02288 0.96906 1.21066 0.96871 0.97530 0.96119 1.21117 0.92802 1.01636 0.99315 0.77405 0.85868 1.22159 1.21994 0.81072 0.82626 0.81220 0.86383 0.84393 0.85028 0.84782 0.74374 0.88497 0.89101 0.83824 0.84602 0.84302 0.82923 0.91158 0.88862 0.83792 0.85138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.89 9.89 -148.98 -1.47 -3.37 16 2 C -0.06 -0.08 2.28 71.23 0.16 0.08 16 3 Si 0.80 -0.74 31.14 68.60 2.14 1.40 16 4 C -0.03 -0.12 6.02 41.04 0.25 0.13 16 5 C -0.19 -0.55 9.43 22.15 0.21 -0.34 16 6 C -0.20 -0.81 10.86 22.15 0.24 -0.57 16 7 C -0.03 -0.14 11.12 83.17 0.92 0.78 16 8 N -0.40 -2.58 2.87 -333.42 -0.96 -3.53 16 9 C 0.11 0.69 4.89 38.08 0.19 0.88 16 10 C -0.10 -0.55 7.68 22.38 0.17 -0.38 16 11 C -0.10 -0.29 9.69 22.25 0.22 -0.07 16 12 C -0.07 -0.05 4.37 -19.84 -0.09 -0.13 16 13 C -0.10 0.62 5.83 29.10 0.17 0.79 16 14 C 0.52 -0.26 7.82 87.66 0.69 0.42 16 15 O -0.58 -6.03 15.63 -3.01 -0.05 -6.07 16 16 N -0.70 4.44 5.26 -440.04 -2.32 2.13 16 17 C 0.12 -0.47 4.32 45.52 0.20 -0.27 16 18 H 0.08 0.14 7.46 -2.38 -0.02 0.12 16 19 C -0.13 0.96 7.29 31.12 0.23 1.19 16 20 C -0.07 0.51 3.86 -11.01 -0.04 0.47 16 21 H 0.12 -1.36 8.10 -2.39 -0.02 -1.38 16 22 C -0.06 0.23 5.29 -19.86 -0.11 0.12 16 23 C -0.12 0.27 8.62 22.27 0.19 0.46 16 24 C -0.10 -0.05 9.79 22.29 0.22 0.17 16 25 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 26 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 27 C -0.10 0.04 9.79 22.29 0.22 0.26 16 28 C -0.11 0.40 9.71 22.27 0.22 0.62 16 29 C -0.14 0.71 7.25 31.12 0.23 0.94 16 30 C -0.10 -0.14 9.69 22.25 0.22 0.07 16 31 C -0.13 -0.51 9.66 22.38 0.22 -0.30 16 32 H 0.38 0.30 8.70 -74.06 -0.64 -0.35 16 33 H 0.12 -0.04 7.96 -2.39 -0.02 -0.06 16 34 H -0.29 -1.49 7.11 99.48 0.71 -0.79 16 35 H -0.29 -1.48 7.11 99.48 0.71 -0.78 16 36 H 0.17 -0.55 6.89 -2.91 -0.02 -0.57 16 37 H 0.16 0.05 8.06 -2.91 -0.02 0.03 16 38 H 0.17 0.46 8.06 -2.91 -0.02 0.44 16 39 H 0.12 0.72 7.67 -2.91 -0.02 0.70 16 40 H 0.14 -0.06 8.06 -2.91 -0.02 -0.08 16 41 H 0.13 -1.47 8.08 -2.39 -0.02 -1.49 16 42 H 0.13 -1.58 8.08 -2.39 -0.02 -1.60 16 43 H 0.42 -5.50 8.70 -92.71 -0.81 -6.30 16 44 H 0.10 -0.66 7.73 -2.39 -0.02 -0.68 16 45 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 46 H 0.14 -0.76 6.64 -2.91 -0.02 -0.78 16 47 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 48 H 0.14 -0.33 8.06 -2.91 -0.02 -0.36 16 49 H 0.15 -1.30 8.06 -2.91 -0.02 -1.32 16 50 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 51 H 0.09 -0.41 6.30 -2.39 -0.02 -0.43 16 52 H 0.14 -0.40 8.06 -2.91 -0.02 -0.43 16 53 H 0.13 0.29 8.06 -2.91 -0.02 0.27 16 Total: 0.00 -23.54 457.26 1.25 -22.29 By element: Atomic # 1 Polarization: -16.70 SS G_CDS: -0.45 Total: -17.15 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: 5.04 Total: 5.21 kcal Atomic # 7 Polarization: 1.87 SS G_CDS: -3.27 Total: -1.41 kcal Atomic # 8 Polarization: -7.92 SS G_CDS: -1.52 Total: -9.44 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: 2.14 Total: 1.40 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -23.54 1.25 -22.29 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13287746.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.763 kcal (2) G-P(sol) polarization free energy of solvation -23.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.246 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.290 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds