Wall clock time and date at job start Sat Mar 6 2021 11:13:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38359 * 120.34539 * 299.72767 * 4 2 1 6 6 C 1.40031 * 118.28621 * 179.73414 * 5 4 2 7 7 C 1.47835 * 120.55768 * 180.23780 * 6 5 4 8 8 O 1.21551 * 120.00193 * 0.28027 * 7 6 5 9 9 N 1.34780 * 120.00054 * 180.27537 * 7 6 5 10 10 C 1.46499 * 120.00131 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84720 * 25.33304 * 10 9 7 12 12 C 1.53781 * 113.61250 * 156.53059 * 10 9 7 13 13 C 1.53778 * 87.08061 * 89.11581 * 12 10 9 14 14 H 1.09004 * 113.61695 * 270.88273 * 13 12 10 15 15 C 1.50704 * 113.61682 * 140.06535 * 13 12 10 16 16 C 1.38241 * 119.98367 * 299.72292 * 15 13 12 17 17 C 1.38228 * 120.00654 * 179.76221 * 16 15 13 18 18 C 1.38326 * 119.98424 * 0.51350 * 17 16 15 19 19 Br 1.89102 * 120.00415 * 179.76337 * 18 17 16 20 20 C 1.38322 * 119.98402 * 359.74112 * 18 17 16 21 21 C 1.38216 * 119.98807 * 0.02562 * 20 18 17 22 22 C 1.53779 * 113.61350 * 254.13568 * 10 9 7 23 23 C 1.39523 * 118.87788 * 0.51425 * 6 5 4 24 24 N 1.31692 * 120.56866 * 359.74568 * 23 6 5 25 25 C 1.31927 * 121.88200 * 0.02562 * 24 23 6 26 26 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 27 27 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 28 28 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 29 29 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 30 30 H 1.07998 * 120.85798 * 359.97438 * 5 4 2 31 31 H 0.97007 * 119.99520 * 0.02562 * 9 7 6 32 32 H 1.08998 * 113.61331 * 203.66265 * 12 10 9 33 33 H 1.08997 * 113.61226 * 334.56892 * 12 10 9 34 34 H 1.07998 * 119.99835 * 0.02562 * 16 15 13 35 35 H 1.07999 * 120.00659 * 180.27595 * 17 16 15 36 36 H 1.07999 * 120.00340 * 179.97438 * 20 18 17 37 37 H 1.08006 * 119.99001 * 179.97438 * 21 20 18 38 38 H 1.09001 * 113.61559 * 25.43879 * 22 10 9 39 39 H 1.09001 * 113.61392 * 156.33480 * 22 10 9 40 40 H 1.08001 * 119.71053 * 179.72544 * 23 6 5 41 41 H 1.07994 * 119.46313 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6061 -2.0366 -1.4537 6 6 2.0914 -2.6527 -2.6138 7 6 1.7703 -4.0661 -2.9048 8 8 1.0754 -4.7021 -2.1366 9 7 2.2480 -4.6495 -4.0220 10 6 1.9293 -6.0499 -4.3106 11 1 1.0008 -6.3777 -3.8432 12 6 2.0284 -6.4093 -5.8025 13 6 3.5068 -6.7436 -5.5431 14 1 4.1752 -5.8913 -5.6653 15 6 3.9853 -7.9718 -6.2737 16 6 3.3885 -9.1953 -6.0329 17 6 3.8237 -10.3212 -6.7063 18 6 4.8636 -10.2254 -7.6134 19 35 5.4639 -11.7666 -8.5301 20 6 5.4639 -9.0019 -7.8501 21 6 5.0248 -7.8758 -7.1798 22 6 3.1080 -7.0102 -4.0792 23 6 2.8879 -1.9117 -3.4874 24 7 3.1743 -0.6527 -3.2281 25 6 2.7275 -0.0451 -2.1457 26 1 -0.3932 0.4418 0.7651 27 1 1.7924 -0.5139 0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5881 2.4585 1.2242 30 1 0.9905 -2.5815 -0.7533 31 1 2.8028 -4.1419 -4.6349 32 1 1.4281 -7.2744 -6.0841 33 1 1.8835 -5.5578 -6.4673 34 1 2.5793 -9.2707 -5.3216 35 1 3.3544 -11.2762 -6.5215 36 1 6.2761 -8.9268 -8.5580 37 1 5.4938 -6.9205 -7.3643 38 1 3.8340 -6.6434 -3.3536 39 1 2.8023 -8.0392 -3.8904 40 1 3.2730 -2.3747 -4.3839 41 1 2.9862 0.9889 -1.9719 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:32 Heat of formation + Delta-G solvation = 32.609413 kcal Electronic energy + Delta-G solvation = -25833.893306 eV Core-core repulsion = 21920.504069 eV Total energy + Delta-G solvation = -3913.389237 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.041 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -42.06153 -41.37846 -40.17437 -38.84968 -38.07081 -34.97880 -33.87089 -33.46289 -32.64246 -32.11429 -30.35865 -27.37467 -26.90589 -26.64397 -25.27266 -23.97511 -23.75147 -22.52017 -21.77382 -20.34503 -19.09634 -18.76244 -18.29869 -17.89450 -17.76483 -16.97561 -16.52708 -16.30680 -16.25846 -16.08496 -15.66220 -15.33141 -15.22904 -14.87270 -14.63418 -14.54300 -14.39245 -14.24097 -14.15062 -13.93106 -13.65268 -13.54034 -12.99834 -12.74121 -12.52212 -12.14887 -12.13797 -12.01377 -11.49069 -11.37782 -11.36318 -11.23234 -11.07626 -10.77679 -10.56284 -10.33298 -10.18543 -10.08045 -9.55807 -5.12196 -0.58665 -0.01877 -0.00398 0.24520 0.66224 1.07683 1.45279 1.68068 1.80023 1.86922 2.48206 2.57493 2.96150 3.12965 3.26201 3.47626 3.48536 3.50857 3.60086 3.64953 3.69059 3.74198 3.78784 3.84760 4.00223 4.04893 4.15811 4.24107 4.31026 4.36486 4.46943 4.55525 4.62675 4.66828 4.74101 4.81888 4.84513 4.89432 4.91286 4.96708 5.15118 5.16441 5.27495 5.37709 5.50523 5.73494 6.25927 6.27552 6.61476 7.02222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.073 4.073 3 Si 0.682 3.318 4 C -0.132 4.132 5 C 0.013 3.987 6 C -0.189 4.189 7 C 0.569 3.431 8 O -0.526 6.526 9 N -0.708 5.708 10 C 0.120 3.880 11 H 0.108 0.892 12 C -0.135 4.135 13 C -0.077 4.077 14 H 0.101 0.899 15 C -0.056 4.056 16 C -0.111 4.111 17 C -0.087 4.087 18 C -0.094 4.094 19 Br -0.051 7.051 20 C -0.088 4.088 21 C -0.110 4.110 22 C -0.143 4.143 23 C 0.139 3.861 24 N -0.476 5.476 25 C 0.132 3.868 26 H 0.384 0.616 27 H 0.084 0.916 28 H -0.250 1.250 29 H -0.254 1.254 30 H 0.151 0.849 31 H 0.401 0.599 32 H 0.101 0.899 33 H 0.080 0.920 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.077 0.923 39 H 0.098 0.902 40 H 0.161 0.839 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.583 2.549 0.778 3.711 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.183 4.183 3 Si 0.581 3.419 4 C -0.134 4.134 5 C -0.013 4.013 6 C -0.195 4.195 7 C 0.356 3.644 8 O -0.402 6.402 9 N -0.360 5.360 10 C 0.014 3.986 11 H 0.126 0.874 12 C -0.172 4.172 13 C -0.095 4.095 14 H 0.119 0.881 15 C -0.056 4.056 16 C -0.130 4.130 17 C -0.107 4.107 18 C -0.174 4.174 19 Br 0.035 6.965 20 C -0.108 4.108 21 C -0.129 4.129 22 C -0.182 4.182 23 C -0.020 4.020 24 N -0.184 5.184 25 C -0.024 4.024 26 H 0.233 0.767 27 H 0.102 0.898 28 H -0.174 1.174 29 H -0.179 1.179 30 H 0.169 0.831 31 H 0.237 0.763 32 H 0.119 0.881 33 H 0.098 0.902 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.096 0.904 39 H 0.116 0.884 40 H 0.178 0.822 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.700 2.493 -0.160 3.679 hybrid contribution -1.402 -0.124 0.929 1.686 sum 1.298 2.369 0.769 2.809 Atomic orbital electron populations 1.86584 1.17305 1.80281 1.50062 1.24702 0.84918 1.11209 0.97482 0.95170 0.91399 0.74121 0.81162 1.20310 1.00501 0.94811 0.97745 1.21604 0.92274 0.93040 0.94376 1.20986 1.04213 0.95516 0.98748 1.17988 0.79432 0.85847 0.81143 1.90821 1.37381 1.64621 1.47342 1.45557 1.53593 1.12550 1.24316 1.21882 0.99509 0.80592 0.96571 0.87389 1.23429 0.95486 1.02790 0.95542 1.21712 0.96669 0.95673 0.95459 0.88107 1.19819 0.95213 0.94592 0.95990 1.21044 1.00435 0.91623 0.99905 1.21148 0.95185 0.99604 0.94781 1.21864 1.00999 0.92970 1.01551 1.96783 1.88874 1.35121 1.75735 1.21152 0.99344 0.90996 0.99279 1.21088 0.96866 0.98480 0.96443 1.23625 0.98309 1.00596 0.95650 1.23014 0.91897 0.89751 0.97324 1.67742 1.21747 1.10112 1.18774 1.22833 0.91782 0.99594 0.88225 0.76696 0.89809 1.17417 1.17900 0.83094 0.76311 0.88064 0.90183 0.84936 0.84886 0.84911 0.85083 0.90411 0.88414 0.82164 0.81945 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 37. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.14 12.76 -35.23 -0.45 -0.59 16 2 C -0.07 0.09 2.82 36.01 0.10 0.19 16 3 Si 0.68 -1.55 29.82 -169.99 -5.07 -6.61 16 4 C -0.13 -0.05 5.42 -104.53 -0.57 -0.61 16 5 C 0.01 0.02 9.31 -38.86 -0.36 -0.34 16 6 C -0.19 -0.14 5.89 -104.82 -0.62 -0.75 16 7 C 0.57 0.84 7.78 -12.33 -0.10 0.75 16 8 O -0.53 -2.78 16.04 5.32 0.09 -2.69 16 9 N -0.71 1.21 5.22 -53.96 -0.28 0.92 16 10 C 0.12 -0.21 4.30 -67.12 -0.29 -0.50 16 11 H 0.11 0.00 7.50 -51.93 -0.39 -0.39 16 12 C -0.13 0.43 7.29 -25.92 -0.19 0.24 16 13 C -0.08 0.24 3.87 -90.82 -0.35 -0.12 16 14 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 15 C -0.06 0.08 5.29 -104.62 -0.55 -0.47 16 16 C -0.11 0.13 8.63 -39.58 -0.34 -0.22 16 17 C -0.09 0.00 9.79 -39.55 -0.39 -0.38 16 18 C -0.09 -0.08 6.22 -39.52 -0.25 -0.32 16 19 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.36 16 20 C -0.09 0.00 9.79 -39.56 -0.39 -0.38 16 21 C -0.11 0.12 9.71 -39.59 -0.38 -0.26 16 22 C -0.14 0.32 7.27 -25.78 -0.19 0.13 16 23 C 0.14 -0.09 10.71 -17.13 -0.18 -0.27 16 24 N -0.48 -0.41 10.35 -12.91 -0.13 -0.55 16 25 C 0.13 0.01 9.84 -17.47 -0.17 -0.16 16 26 H 0.38 -1.44 8.74 45.56 0.40 -1.04 16 27 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 29 H -0.25 0.05 7.11 56.52 0.40 0.46 16 30 H 0.15 0.29 7.74 -52.49 -0.41 -0.12 16 31 H 0.40 -1.76 6.77 -40.82 -0.28 -2.04 16 32 H 0.10 -0.33 7.73 -51.93 -0.40 -0.73 16 33 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 34 H 0.13 -0.37 6.65 -52.49 -0.35 -0.72 16 35 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 36 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 37 H 0.13 -0.39 8.05 -52.48 -0.42 -0.82 16 38 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.10 -0.24 6.31 -51.93 -0.33 -0.57 16 40 H 0.16 -0.66 6.42 -52.49 -0.34 -1.00 16 41 H 0.16 -0.36 4.88 -52.49 -0.26 -0.61 16 LS Contribution 365.28 15.07 5.50 5.50 Total: 0.00 -8.76 365.28 -12.34 -21.10 By element: Atomic # 1 Polarization: -6.76 SS G_CDS: -4.49 Total: -11.25 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -5.21 Total: -3.48 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.42 Total: 0.38 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.36 Total: -3.28 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.07 Total: -6.61 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.76 -12.34 -21.10 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.710 kcal (2) G-P(sol) polarization free energy of solvation -8.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.946 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.101 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds