Wall clock time and date at job start Sat Mar 6 2021 11:13:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38359 * 120.34539 * 299.72767 * 4 2 1 6 6 C 1.40031 * 118.28621 * 179.73414 * 5 4 2 7 7 C 1.47835 * 120.55768 * 180.23780 * 6 5 4 8 8 O 1.21551 * 120.00193 * 0.28027 * 7 6 5 9 9 N 1.34780 * 120.00054 * 180.27537 * 7 6 5 10 10 C 1.46499 * 120.00131 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84720 * 25.33304 * 10 9 7 12 12 C 1.53781 * 113.61250 * 156.53059 * 10 9 7 13 13 C 1.53778 * 87.08061 * 89.11581 * 12 10 9 14 14 H 1.09004 * 113.61695 * 270.88273 * 13 12 10 15 15 C 1.50704 * 113.61682 * 140.06535 * 13 12 10 16 16 C 1.38241 * 119.98367 * 299.72292 * 15 13 12 17 17 C 1.38228 * 120.00654 * 179.76221 * 16 15 13 18 18 C 1.38326 * 119.98424 * 0.51350 * 17 16 15 19 19 Br 1.89102 * 120.00415 * 179.76337 * 18 17 16 20 20 C 1.38322 * 119.98402 * 359.74112 * 18 17 16 21 21 C 1.38216 * 119.98807 * 0.02562 * 20 18 17 22 22 C 1.53779 * 113.61350 * 254.13568 * 10 9 7 23 23 C 1.39523 * 118.87788 * 0.51425 * 6 5 4 24 24 N 1.31692 * 120.56866 * 359.74568 * 23 6 5 25 25 C 1.31927 * 121.88200 * 0.02562 * 24 23 6 26 26 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 27 27 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 28 28 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 29 29 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 30 30 H 1.07998 * 120.85798 * 359.97438 * 5 4 2 31 31 H 0.97007 * 119.99520 * 0.02562 * 9 7 6 32 32 H 1.08998 * 113.61331 * 203.66265 * 12 10 9 33 33 H 1.08997 * 113.61226 * 334.56892 * 12 10 9 34 34 H 1.07998 * 119.99835 * 0.02562 * 16 15 13 35 35 H 1.07999 * 120.00659 * 180.27595 * 17 16 15 36 36 H 1.07999 * 120.00340 * 179.97438 * 20 18 17 37 37 H 1.08006 * 119.99001 * 179.97438 * 21 20 18 38 38 H 1.09001 * 113.61559 * 25.43879 * 22 10 9 39 39 H 1.09001 * 113.61392 * 156.33480 * 22 10 9 40 40 H 1.08001 * 119.71053 * 179.72544 * 23 6 5 41 41 H 1.07994 * 119.46313 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6061 -2.0366 -1.4537 6 6 2.0914 -2.6527 -2.6138 7 6 1.7703 -4.0661 -2.9048 8 8 1.0754 -4.7021 -2.1366 9 7 2.2480 -4.6495 -4.0220 10 6 1.9293 -6.0499 -4.3106 11 1 1.0008 -6.3777 -3.8432 12 6 2.0284 -6.4093 -5.8025 13 6 3.5068 -6.7436 -5.5431 14 1 4.1752 -5.8913 -5.6653 15 6 3.9853 -7.9718 -6.2737 16 6 3.3885 -9.1953 -6.0329 17 6 3.8237 -10.3212 -6.7063 18 6 4.8636 -10.2254 -7.6134 19 35 5.4639 -11.7666 -8.5301 20 6 5.4639 -9.0019 -7.8501 21 6 5.0248 -7.8758 -7.1798 22 6 3.1080 -7.0102 -4.0792 23 6 2.8879 -1.9117 -3.4874 24 7 3.1743 -0.6527 -3.2281 25 6 2.7275 -0.0451 -2.1457 26 1 -0.3932 0.4418 0.7651 27 1 1.7924 -0.5139 0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5881 2.4585 1.2242 30 1 0.9905 -2.5815 -0.7533 31 1 2.8028 -4.1419 -4.6349 32 1 1.4281 -7.2744 -6.0841 33 1 1.8835 -5.5578 -6.4673 34 1 2.5793 -9.2707 -5.3216 35 1 3.3544 -11.2762 -6.5215 36 1 6.2761 -8.9268 -8.5580 37 1 5.4938 -6.9205 -7.3643 38 1 3.8340 -6.6434 -3.3536 39 1 2.8023 -8.0392 -3.8904 40 1 3.2730 -2.3747 -4.3839 41 1 2.9862 0.9889 -1.9719 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:31 Heat of formation + Delta-G solvation = 34.561795 kcal Electronic energy + Delta-G solvation = -25833.808645 eV Core-core repulsion = 21920.504069 eV Total energy + Delta-G solvation = -3913.304575 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.041 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.04063 -41.28054 -40.17757 -38.81218 -38.02066 -34.99586 -33.87490 -33.43527 -32.60318 -32.01834 -30.31736 -27.30990 -26.70776 -26.59236 -25.20414 -23.89482 -23.71659 -22.42767 -21.77507 -20.22209 -19.07596 -18.70108 -18.23249 -17.83090 -17.71677 -16.88524 -16.47961 -16.30302 -16.20562 -16.03479 -15.59869 -15.27845 -15.17505 -14.81382 -14.58069 -14.47320 -14.32223 -14.22139 -14.11084 -13.85955 -13.48332 -13.42855 -12.91763 -12.70923 -12.39749 -12.13578 -12.06279 -11.87074 -11.45457 -11.41686 -11.27758 -11.21739 -11.10561 -10.75057 -10.57302 -10.29884 -10.11640 -9.99388 -9.50111 -4.95761 -0.58569 -0.02859 0.06591 0.33521 0.66519 1.21515 1.58608 1.62583 1.88137 1.94903 2.57048 2.59451 3.07105 3.23075 3.43892 3.56201 3.62345 3.65459 3.67945 3.71444 3.77080 3.83855 3.95961 3.96455 4.14030 4.20531 4.22455 4.37145 4.42421 4.48072 4.62187 4.72201 4.78669 4.80385 4.84420 4.89342 4.94319 5.02566 5.05650 5.12929 5.24882 5.25082 5.31137 5.47034 5.64491 5.85309 6.34608 6.51526 6.64123 7.02497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.086 4.086 3 Si 0.770 3.230 4 C -0.138 4.138 5 C -0.003 4.003 6 C -0.198 4.198 7 C 0.569 3.431 8 O -0.573 6.573 9 N -0.691 5.691 10 C 0.113 3.887 11 H 0.087 0.913 12 C -0.124 4.124 13 C -0.067 4.067 14 H 0.120 0.880 15 C -0.056 4.056 16 C -0.115 4.115 17 C -0.100 4.100 18 C -0.110 4.110 19 Br -0.065 7.065 20 C -0.100 4.100 21 C -0.111 4.111 22 C -0.142 4.142 23 C 0.146 3.854 24 N -0.492 5.492 25 C 0.128 3.872 26 H 0.399 0.601 27 H 0.102 0.898 28 H -0.291 1.291 29 H -0.280 1.280 30 H 0.137 0.863 31 H 0.417 0.583 32 H 0.102 0.898 33 H 0.092 0.908 34 H 0.146 0.854 35 H 0.136 0.864 36 H 0.139 0.861 37 H 0.153 0.847 38 H 0.070 0.930 39 H 0.098 0.902 40 H 0.196 0.804 41 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.492 3.652 0.209 5.057 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.195 4.195 3 Si 0.674 3.326 4 C -0.141 4.141 5 C -0.030 4.030 6 C -0.203 4.203 7 C 0.356 3.644 8 O -0.453 6.453 9 N -0.342 5.342 10 C 0.008 3.992 11 H 0.105 0.895 12 C -0.162 4.162 13 C -0.085 4.085 14 H 0.138 0.862 15 C -0.057 4.057 16 C -0.133 4.133 17 C -0.120 4.120 18 C -0.190 4.190 19 Br 0.021 6.979 20 C -0.119 4.119 21 C -0.130 4.130 22 C -0.181 4.181 23 C -0.012 4.012 24 N -0.200 5.200 25 C -0.027 4.027 26 H 0.250 0.750 27 H 0.119 0.881 28 H -0.218 1.218 29 H -0.207 1.207 30 H 0.155 0.845 31 H 0.255 0.745 32 H 0.121 0.879 33 H 0.110 0.890 34 H 0.164 0.836 35 H 0.154 0.846 36 H 0.156 0.844 37 H 0.171 0.829 38 H 0.089 0.911 39 H 0.117 0.883 40 H 0.212 0.788 41 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges 3.638 3.582 -0.748 5.160 hybrid contribution -1.732 -0.451 1.123 2.113 sum 1.906 3.131 0.375 3.685 Atomic orbital electron populations 1.86539 1.18270 1.80898 1.51308 1.25006 0.84371 1.12487 0.97604 0.94195 0.89898 0.71208 0.77321 1.20483 1.00616 0.94468 0.98488 1.21648 0.92766 0.93725 0.94814 1.20996 1.04953 0.95272 0.99073 1.18150 0.78907 0.86015 0.81323 1.90796 1.39740 1.65663 1.49092 1.45431 1.52708 1.12654 1.23445 1.21911 0.98962 0.80507 0.97807 0.89478 1.23381 0.95290 1.03236 0.94263 1.21723 0.96996 0.95570 0.94216 0.86239 1.20011 0.94913 0.94952 0.95780 1.21255 1.00709 0.91537 0.99845 1.21296 0.95325 1.00313 0.95048 1.21983 1.01821 0.92913 1.02242 1.96754 1.89045 1.36046 1.76081 1.21334 0.99699 0.91107 0.99790 1.21364 0.96726 0.98985 0.95927 1.23613 0.97767 1.00463 0.96229 1.23483 0.90731 0.89202 0.97778 1.67815 1.22293 1.10712 1.19142 1.23152 0.91321 1.00349 0.87904 0.74986 0.88055 1.21828 1.20690 0.84513 0.74458 0.87941 0.88958 0.83635 0.84586 0.84363 0.82935 0.91105 0.88319 0.78769 0.80193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.67 12.76 -148.98 -1.90 -2.57 16 2 C -0.09 0.20 2.82 71.24 0.20 0.40 16 3 Si 0.77 -3.71 29.82 68.60 2.05 -1.67 16 4 C -0.14 -0.15 5.42 -19.81 -0.11 -0.25 16 5 C 0.00 -0.01 9.31 22.73 0.21 0.20 16 6 C -0.20 -0.35 5.89 -19.99 -0.12 -0.47 16 7 C 0.57 2.06 7.78 86.78 0.68 2.73 16 8 O -0.57 -7.17 16.04 -3.88 -0.06 -7.23 16 9 N -0.69 2.79 5.22 -442.92 -2.31 0.48 16 10 C 0.11 -0.43 4.30 45.52 0.20 -0.23 16 11 H 0.09 0.09 7.50 -2.39 -0.02 0.07 16 12 C -0.12 0.98 7.29 31.12 0.23 1.21 16 13 C -0.07 0.53 3.87 -10.92 -0.04 0.49 16 14 H 0.12 -1.35 8.09 -2.38 -0.02 -1.37 16 15 C -0.06 0.24 5.29 -19.86 -0.11 0.13 16 16 C -0.11 0.31 8.63 22.27 0.19 0.51 16 17 C -0.10 -0.02 9.79 22.29 0.22 0.20 16 18 C -0.11 -0.21 6.22 22.31 0.14 -0.07 16 19 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 20 C -0.10 0.04 9.79 22.28 0.22 0.26 16 21 C -0.11 0.40 9.71 22.26 0.22 0.62 16 22 C -0.14 0.72 7.27 31.21 0.23 0.94 16 23 C 0.15 -0.34 10.71 85.02 0.91 0.57 16 24 N -0.49 -0.40 10.35 -194.76 -2.01 -2.42 16 25 C 0.13 -0.03 9.84 84.71 0.83 0.80 16 26 H 0.40 -2.79 8.74 -74.05 -0.65 -3.44 16 27 H 0.10 -0.62 7.96 -2.38 -0.02 -0.64 16 28 H -0.29 -0.59 7.11 99.48 0.71 0.11 16 29 H -0.28 0.16 7.11 99.48 0.71 0.87 16 30 H 0.14 0.86 7.74 -2.91 -0.02 0.84 16 31 H 0.42 -4.48 6.77 -92.70 -0.63 -5.11 16 32 H 0.10 -0.78 7.73 -2.39 -0.02 -0.80 16 33 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 34 H 0.15 -0.88 6.65 -2.91 -0.02 -0.90 16 35 H 0.14 -0.18 8.06 -2.91 -0.02 -0.21 16 36 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 37 H 0.15 -1.29 8.05 -2.91 -0.02 -1.31 16 38 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 39 H 0.10 -0.51 6.31 -2.39 -0.02 -0.53 16 40 H 0.20 -2.07 6.42 -2.91 -0.02 -2.09 16 41 H 0.18 -0.91 4.88 -2.91 -0.01 -0.93 16 Total: 0.00 -22.23 365.28 -0.97 -23.20 By element: Atomic # 1 Polarization: -16.80 SS G_CDS: -0.13 Total: -16.93 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: 4.09 Total: 8.03 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -4.33 Total: -1.94 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -1.96 Total: -9.80 kcal Atomic # 14 Polarization: -3.71 SS G_CDS: 2.05 Total: -1.67 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -22.23 -0.97 -23.20 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.763 kcal (2) G-P(sol) polarization free energy of solvation -22.230 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.201 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.562 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds