Wall clock time and date at job start Sat Mar 6 2021 11:13:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.36414 * 125.79824 * 2 1 4 4 C 1.47374 * 127.19781 * 359.97438 * 3 2 1 5 5 O 1.21619 * 119.99625 * 0.02562 * 4 3 2 6 6 N 1.34774 * 120.00556 * 179.97438 * 4 3 2 7 7 C 1.46496 * 120.00099 * 180.02562 * 6 4 3 8 8 H 1.08994 * 112.91109 * 23.75176 * 7 6 4 9 9 C 1.53787 * 113.61210 * 155.00440 * 7 6 4 10 10 C 1.53778 * 87.08035 * 89.11438 * 9 7 6 11 11 H 1.08999 * 113.61280 * 270.79710 * 10 9 7 12 12 C 1.50698 * 113.61154 * 139.98353 * 10 9 7 13 13 C 1.38248 * 119.98839 * 299.71850 * 12 10 9 14 14 C 1.38223 * 120.00912 * 179.76668 * 13 12 10 15 15 C 1.38325 * 119.98707 * 0.51431 * 14 13 12 16 16 Br 1.89103 * 120.00824 * 179.76632 * 15 14 13 17 17 C 1.38327 * 119.98213 * 359.74210 * 15 14 13 18 18 C 1.38214 * 119.99125 * 0.02562 * 17 15 14 19 19 C 1.53778 * 87.08449 * 25.43264 * 10 9 7 20 20 C 1.47023 * 105.61079 * 180.25991 * 3 2 1 21 21 C 1.34177 * 105.95607 * 359.56708 * 20 3 2 22 22 C 1.50703 * 125.43746 * 180.14009 * 21 20 3 23 23 O 1.42898 * 109.47408 * 300.31579 * 22 21 20 24 24 Si 1.86301 * 109.46878 * 180.31752 * 22 21 20 25 25 O 1.33651 * 125.80078 * 179.97438 * 2 1 3 26 26 H 1.09004 * 109.46865 * 90.00073 * 1 2 3 27 27 H 1.09001 * 109.46926 * 210.00055 * 1 2 3 28 28 H 1.08999 * 109.46840 * 330.00059 * 1 2 3 29 29 H 0.97002 * 119.99411 * 0.02562 * 6 4 3 30 30 H 1.08998 * 113.61103 * 203.66698 * 9 7 6 31 31 H 1.08997 * 113.61087 * 334.48007 * 9 7 6 32 32 H 1.07997 * 119.99531 * 0.02657 * 13 12 10 33 33 H 1.07997 * 120.00305 * 180.27648 * 14 13 12 34 34 H 1.07995 * 120.00351 * 180.02562 * 17 15 14 35 35 H 1.07994 * 119.99927 * 180.02562 * 18 17 15 36 36 H 1.08993 * 113.61229 * 220.02023 * 19 10 9 37 37 H 1.09000 * 113.61263 * 89.11673 * 19 10 9 38 38 H 1.08006 * 127.02208 * 179.73542 * 20 3 2 39 39 H 1.09000 * 109.46804 * 60.32654 * 22 21 20 40 40 H 0.96700 * 114.00391 * 300.00259 * 23 22 21 41 41 H 1.48495 * 109.99906 * 180.02562 * 24 22 21 42 42 H 1.48498 * 110.00144 * 301.32444 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 -0.0005 5 8 0.6890 2.7892 -0.0006 6 7 2.7930 3.5016 0.0001 7 6 2.3645 4.9025 0.0001 8 1 1.3615 5.0394 0.4040 9 6 3.4053 5.8650 0.5962 10 6 3.9880 5.9877 -0.8216 11 1 4.7517 5.2430 -1.0457 12 6 4.4133 7.3883 -1.1802 13 6 3.4852 8.4128 -1.1833 14 6 3.8758 9.6985 -1.5074 15 6 5.1934 9.9578 -1.8392 16 35 5.7270 11.7153 -2.2892 17 6 6.1206 8.9314 -1.8412 18 6 5.7302 7.6470 -1.5122 19 6 2.5902 5.6157 -1.3435 20 6 3.6849 0.5991 -0.0064 21 6 3.5860 -0.7390 0.0001 22 6 4.7460 -1.7010 0.0001 23 8 5.5423 -1.4870 -1.1670 24 14 4.1028 -3.4494 0.0009 25 8 2.2889 -1.0840 0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 3.7382 3.2834 0.0005 30 1 2.9760 6.7930 0.9737 31 1 4.0811 5.3909 1.3080 32 1 2.4557 8.2095 -0.9282 33 1 3.1516 10.4996 -1.5054 34 1 7.1495 9.1335 -2.0998 35 1 6.4541 6.8456 -1.5133 36 1 2.6090 4.9402 -2.1986 37 1 1.9381 6.4757 -1.4963 38 1 4.5929 1.1840 -0.0122 39 1 5.3538 -1.5372 0.8899 40 1 5.0649 -1.6158 -1.9980 41 1 5.2370 -4.4079 0.0015 42 1 3.2469 -3.6752 1.1933 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:36 Heat of formation + Delta-G solvation = 8.632632 kcal Electronic energy + Delta-G solvation = -26836.550642 eV Core-core repulsion = 22797.091553 eV Total energy + Delta-G solvation = -4039.459089 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.046 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.77168 -41.56353 -40.28117 -38.81227 -37.99342 -34.87264 -34.05321 -33.17802 -32.82175 -32.04006 -30.38834 -29.35447 -26.71357 -26.48070 -25.51584 -24.32347 -23.78993 -22.62385 -22.08816 -20.84541 -20.00563 -18.96321 -18.19075 -17.77686 -17.66462 -17.00663 -16.74403 -16.49700 -16.14041 -15.98929 -15.85099 -15.65482 -15.11099 -15.00370 -14.65454 -14.49542 -14.34066 -14.26346 -14.11966 -13.93343 -13.81057 -13.47695 -13.44231 -12.92705 -12.84874 -12.76591 -12.41119 -12.25388 -12.05959 -11.86769 -11.42345 -11.28943 -11.23066 -11.14889 -10.93852 -10.61651 -10.13531 -10.01042 -9.57627 -9.51119 -5.00535 0.04891 0.22423 0.31796 0.65077 0.82765 1.18225 1.40068 1.76110 1.91449 2.10335 2.22547 2.55979 3.22061 3.43832 3.47566 3.64042 3.66360 3.74807 3.78454 3.82729 3.94779 3.95845 4.11180 4.18975 4.32017 4.35473 4.41086 4.46116 4.60155 4.60795 4.66251 4.70470 4.76775 4.77420 4.87417 4.89364 5.01107 5.04157 5.11646 5.16723 5.22025 5.23261 5.24437 5.50363 5.64406 5.83342 5.89745 6.47056 6.62907 7.15019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.085 3.915 3 C -0.269 4.269 4 C 0.592 3.408 5 O -0.573 6.573 6 N -0.694 5.694 7 C 0.116 3.884 8 H 0.090 0.910 9 C -0.125 4.125 10 C -0.067 4.067 11 H 0.113 0.887 12 C -0.056 4.056 13 C -0.114 4.114 14 C -0.099 4.099 15 C -0.110 4.110 16 Br -0.063 7.063 17 C -0.099 4.099 18 C -0.113 4.113 19 C -0.141 4.141 20 C -0.147 4.147 21 C -0.061 4.061 22 C -0.022 4.022 23 O -0.539 6.539 24 Si 0.773 3.227 25 O -0.172 6.172 26 H 0.102 0.898 27 H 0.096 0.904 28 H 0.096 0.904 29 H 0.413 0.587 30 H 0.103 0.897 31 H 0.086 0.914 32 H 0.147 0.853 33 H 0.138 0.862 34 H 0.139 0.861 35 H 0.150 0.850 36 H 0.068 0.932 37 H 0.100 0.900 38 H 0.178 0.822 39 H 0.139 0.861 40 H 0.400 0.600 41 H -0.280 1.280 42 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.243 -3.014 -1.042 3.423 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.032 3.968 3 C -0.273 4.273 4 C 0.381 3.619 5 O -0.454 6.454 6 N -0.345 5.345 7 C 0.010 3.990 8 H 0.108 0.892 9 C -0.163 4.163 10 C -0.085 4.085 11 H 0.131 0.869 12 C -0.057 4.057 13 C -0.133 4.133 14 C -0.118 4.118 15 C -0.189 4.189 16 Br 0.022 6.978 17 C -0.119 4.119 18 C -0.132 4.132 19 C -0.180 4.180 20 C -0.166 4.166 21 C -0.109 4.109 22 C -0.132 4.132 23 O -0.347 6.347 24 Si 0.678 3.322 25 O -0.069 6.069 26 H 0.120 0.880 27 H 0.115 0.885 28 H 0.114 0.886 29 H 0.250 0.750 30 H 0.122 0.878 31 H 0.105 0.895 32 H 0.165 0.835 33 H 0.156 0.844 34 H 0.156 0.844 35 H 0.168 0.832 36 H 0.087 0.913 37 H 0.119 0.881 38 H 0.195 0.805 39 H 0.156 0.844 40 H 0.251 0.749 41 H -0.206 1.206 42 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 0.971 -3.081 -0.358 3.250 hybrid contribution 0.558 0.478 0.404 0.839 sum 1.530 -2.603 0.046 3.020 Atomic orbital electron populations 1.20713 0.82624 1.05393 1.05385 1.23231 0.94773 0.83022 0.95778 1.21192 0.94243 0.93420 1.18475 1.17346 0.85200 0.84373 0.74987 1.90762 1.17948 1.84494 1.52186 1.45348 1.09947 1.04867 1.74364 1.21870 0.99515 0.79840 0.97730 0.89193 1.23383 0.97328 0.99636 0.95936 1.21634 0.97312 0.92866 0.96695 0.86860 1.20012 0.93326 0.95561 0.96766 1.21256 1.00807 0.91445 0.99773 1.21303 0.94143 0.98336 0.98056 1.21983 0.97105 0.91511 1.08338 1.96754 1.91665 1.16888 1.92482 1.21322 0.99591 0.92286 0.98681 1.21346 0.96400 0.96499 0.98949 1.23560 0.96387 1.00769 0.97236 1.22784 0.96370 0.93614 1.03803 1.22914 0.82848 0.96063 1.09027 1.24408 0.89367 1.06813 0.92651 1.86532 1.38705 1.93320 1.16115 0.93296 0.78969 0.72627 0.87268 1.83676 1.16798 1.35004 1.71458 0.87957 0.88520 0.88586 0.75004 0.87847 0.89530 0.83511 0.84415 0.84362 0.83227 0.91338 0.88132 0.80475 0.84375 0.74924 1.20646 1.22316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 71.24 0.70 0.74 16 2 C 0.09 0.22 7.37 25.26 0.19 0.41 16 3 C -0.27 -0.74 6.31 -18.99 -0.12 -0.86 16 4 C 0.59 2.75 7.81 86.65 0.68 3.43 16 5 O -0.57 -6.34 14.45 -4.09 -0.06 -6.40 16 6 N -0.69 1.20 5.26 -443.34 -2.33 -1.13 16 7 C 0.12 -0.28 4.32 45.52 0.20 -0.09 16 8 H 0.09 0.15 7.46 -2.39 -0.02 0.13 16 9 C -0.12 0.78 7.29 31.12 0.23 1.01 16 10 C -0.07 0.42 3.86 -11.02 -0.04 0.37 16 11 H 0.11 -0.98 8.09 -2.39 -0.02 -1.00 16 12 C -0.06 0.17 5.29 -19.86 -0.11 0.07 16 13 C -0.11 0.25 8.62 22.27 0.19 0.44 16 14 C -0.10 -0.05 9.79 22.29 0.22 0.17 16 15 C -0.11 -0.26 6.22 22.31 0.14 -0.12 16 16 Br -0.06 -0.22 33.70 -20.37 -0.69 -0.91 16 17 C -0.10 -0.03 9.79 22.29 0.22 0.19 16 18 C -0.11 0.28 9.71 22.27 0.22 0.50 16 19 C -0.14 0.55 7.25 31.12 0.23 0.77 16 20 C -0.15 0.19 10.46 23.65 0.25 0.44 16 21 C -0.06 0.06 6.20 24.76 0.15 0.22 16 22 C -0.02 0.09 2.98 71.24 0.21 0.30 16 23 O -0.54 2.48 12.86 -148.98 -1.92 0.56 16 24 Si 0.77 -2.46 32.09 68.60 2.20 -0.26 16 25 O -0.17 -0.23 8.89 4.48 0.04 -0.19 16 26 H 0.10 -0.25 8.14 -2.39 -0.02 -0.27 16 27 H 0.10 -0.37 8.14 -2.39 -0.02 -0.39 16 28 H 0.10 0.29 6.49 -2.39 -0.02 0.27 16 29 H 0.41 -2.76 7.87 -92.71 -0.73 -3.49 16 30 H 0.10 -0.67 7.73 -2.39 -0.02 -0.69 16 31 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 32 H 0.15 -0.83 6.64 -2.91 -0.02 -0.85 16 33 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 34 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 35 H 0.15 -1.03 8.05 -2.91 -0.02 -1.05 16 36 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 37 H 0.10 -0.46 6.30 -2.39 -0.02 -0.48 16 38 H 0.18 -1.11 7.74 -2.91 -0.02 -1.13 16 39 H 0.14 -0.70 7.96 -2.39 -0.02 -0.72 16 40 H 0.40 -4.76 8.70 -74.06 -0.64 -5.41 16 41 H -0.28 -0.66 7.11 99.48 0.71 0.05 16 42 H -0.30 -1.21 7.11 99.48 0.71 -0.50 16 Total: 0.00 -17.65 376.34 0.54 -17.11 By element: Atomic # 1 Polarization: -16.52 SS G_CDS: -0.26 Total: -16.78 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 3.55 Total: 8.00 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -2.33 Total: -1.13 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -1.94 Total: -6.03 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.20 Total: -0.26 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.69 Total: -0.91 kcal Total: -17.65 0.54 -17.11 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.745 kcal (2) G-P(sol) polarization free energy of solvation -17.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.113 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds