Wall clock time and date at job start Sat Mar 6 2021 11:13:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86293 * 109.47143 * 2 1 4 4 C 1.50700 * 109.47141 * 239.99954 * 2 1 3 5 5 C 1.33747 * 125.12320 * 299.97510 * 4 2 1 6 6 C 1.37795 * 115.08127 * 179.97438 * 5 4 2 7 7 C 1.34975 * 114.70738 * 0.02562 * 6 5 4 8 8 C 1.47560 * 125.28013 * 180.26508 * 7 6 5 9 9 C 1.39817 * 119.99444 * 359.44259 * 8 7 6 10 10 C 1.36573 * 119.99823 * 179.72296 * 9 8 7 11 11 C 1.39828 * 119.99222 * 0.57753 * 10 9 8 12 12 C 1.47566 * 119.99465 * 179.72303 * 11 10 9 13 13 O 1.21601 * 119.99522 * 179.97438 * 12 11 10 14 14 N 1.34777 * 120.00277 * 359.97222 * 12 11 10 15 15 C 1.46495 * 120.00110 * 180.02562 * 14 12 11 16 16 H 1.08999 * 112.84950 * 25.32904 * 15 14 12 17 17 C 1.53780 * 113.61730 * 156.52942 * 15 14 12 18 18 C 1.53788 * 87.07937 * 89.11502 * 17 15 14 19 19 H 1.08998 * 113.61552 * 270.88468 * 18 17 15 20 20 C 1.50703 * 113.61062 * 140.06774 * 18 17 15 21 21 C 1.38237 * 119.98833 * 299.72246 * 20 18 17 22 22 C 1.38219 * 120.00594 * 179.72699 * 21 20 18 23 23 C 1.38321 * 119.99001 * 0.55143 * 22 21 20 24 24 Br 1.89105 * 120.01264 * 179.70067 * 23 22 21 25 25 C 1.38324 * 119.98069 * 359.72589 * 23 22 21 26 26 C 1.38211 * 119.99060 * 0.02562 * 25 23 22 27 27 C 1.53786 * 113.61428 * 254.13864 * 15 14 12 28 28 C 1.39833 * 120.00399 * 359.69222 * 11 10 9 29 29 C 1.36559 * 119.99334 * 0.02562 * 28 11 10 30 30 S 1.75859 * 125.11793 * 119.97307 * 4 2 1 31 31 H 0.96699 * 114.00086 * 60.00051 * 1 2 3 32 32 H 1.09003 * 109.47195 * 120.00426 * 2 1 3 33 33 H 1.48502 * 110.00272 * 59.99996 * 3 2 1 34 34 H 1.48504 * 110.00184 * 181.31791 * 3 2 1 35 35 H 1.08000 * 122.45148 * 0.02562 * 5 4 2 36 36 H 1.08001 * 122.64406 * 180.02562 * 6 5 4 37 37 H 1.07999 * 120.00143 * 359.97438 * 9 8 7 38 38 H 1.07995 * 119.99897 * 180.27571 * 10 9 8 39 39 H 0.97000 * 119.99735 * 0.02562 * 14 12 11 40 40 H 1.08994 * 113.61865 * 203.66013 * 17 15 14 41 41 H 1.09003 * 113.60934 * 334.57090 * 17 15 14 42 42 H 1.07999 * 119.99719 * 359.97438 * 21 20 18 43 43 H 1.07997 * 120.00381 * 180.29813 * 22 21 20 44 44 H 1.08004 * 120.00656 * 180.02562 * 25 23 22 45 45 H 1.08007 * 119.99876 * 179.97438 * 26 25 23 46 46 H 1.09000 * 113.61353 * 25.43280 * 27 15 14 47 47 H 1.08998 * 113.61637 * 156.33059 * 27 15 14 48 48 H 1.08003 * 120.00045 * 180.02562 * 28 11 10 49 49 H 1.08004 * 119.99491 * 179.97438 * 29 28 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6725 -1.9849 -1.5427 6 6 2.2375 -2.4241 -2.7202 7 6 2.9666 -1.4969 -3.3764 8 6 3.6667 -1.7132 -4.6572 9 6 3.6133 -2.9636 -5.2806 10 6 4.2565 -3.1623 -6.4688 11 6 4.9785 -2.1186 -7.0558 12 6 5.6787 -2.3350 -8.3367 13 8 6.3062 -1.4272 -8.8474 14 7 5.6227 -3.5387 -8.9404 15 6 6.3182 -3.7536 -10.2117 16 1 7.1635 -3.0798 -10.3508 17 6 6.6540 -5.2285 -10.4885 18 6 5.2761 -5.3339 -11.1633 19 1 4.4738 -5.6061 -10.4776 20 6 5.2810 -6.1677 -12.4187 21 6 6.0753 -5.8005 -13.4889 22 6 6.0843 -6.5681 -14.6384 23 6 5.2899 -7.6973 -14.7220 24 35 5.2954 -8.7431 -16.2975 25 6 4.4910 -8.0611 -13.6530 26 6 4.4864 -7.2958 -12.5020 27 6 5.3765 -3.8192 -11.4257 28 6 5.0366 -0.8697 -6.4296 29 6 4.3886 -0.6696 -5.2443 30 16 2.9461 0.0116 -2.4721 31 1 -0.3933 0.4417 -0.7650 32 1 1.7923 -0.5139 0.8900 33 1 1.5615 2.4679 1.2085 34 1 3.5346 1.7703 -0.0321 35 1 1.0646 -2.6226 -0.9181 36 1 2.1073 -3.4308 -3.0890 37 1 3.0600 -3.7712 -4.8244 38 1 4.2116 -4.1268 -6.9525 39 1 5.1218 -4.2627 -8.5331 40 1 7.4885 -5.3647 -11.1763 41 1 6.7453 -5.8324 -9.5856 42 1 6.6918 -4.9161 -13.4254 43 1 6.7085 -6.2839 -15.4726 44 1 3.8708 -8.9429 -13.7177 45 1 3.8623 -7.5795 -11.6674 46 1 4.4371 -3.2861 -11.2790 47 1 5.8624 -3.5707 -12.3692 48 1 5.5940 -0.0635 -6.8832 49 1 4.4337 0.2949 -4.7603 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:40 Heat of formation + Delta-G solvation = 58.263491 kcal Electronic energy + Delta-G solvation = -32780.112011 eV Core-core repulsion = 28198.433575 eV Total energy + Delta-G solvation = -4581.678435 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.034 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -41.77904 -40.88224 -39.91999 -39.13872 -38.63914 -37.35130 -34.92565 -33.55994 -32.92097 -32.17701 -32.01614 -30.61447 -30.13938 -27.36660 -26.69887 -25.91260 -24.69521 -24.01441 -23.80979 -23.38933 -22.40155 -21.80644 -20.24391 -20.19880 -19.17084 -18.67691 -17.93950 -17.62119 -17.13420 -16.63892 -16.53954 -16.23049 -16.21022 -16.14338 -16.03562 -15.92858 -15.54279 -15.11510 -15.07026 -14.79136 -14.54477 -14.45316 -14.41183 -14.33658 -14.15913 -13.88684 -13.60305 -13.53780 -13.43077 -13.24254 -13.09169 -12.89470 -12.58426 -12.39649 -12.28415 -12.06208 -12.04783 -11.85618 -11.56609 -11.41305 -11.28063 -11.20660 -11.13055 -10.80576 -10.53086 -10.17610 -10.13962 -9.99620 -9.54494 -9.50208 -9.02153 -5.16057 -0.88045 0.06398 0.26166 0.33353 0.35384 0.39210 0.66392 0.77100 1.22353 1.52734 1.59372 1.85089 1.96541 2.01761 2.57367 2.83847 3.40171 3.44509 3.45726 3.64999 3.66901 3.69665 3.75527 3.76744 3.83957 3.86106 3.96132 3.96806 4.19848 4.22347 4.32736 4.37021 4.37484 4.42459 4.47526 4.56904 4.62189 4.65270 4.72176 4.78763 4.84969 4.90258 4.93700 5.02476 5.02731 5.05902 5.11524 5.14396 5.24013 5.24771 5.25466 5.30206 5.33550 5.49375 5.49697 5.65208 5.74791 5.85103 6.45312 6.66750 7.13002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.024 4.024 3 Si 0.716 3.284 4 C -0.221 4.221 5 C -0.110 4.110 6 C -0.116 4.116 7 C -0.159 4.159 8 C 0.006 3.994 9 C -0.109 4.109 10 C -0.067 4.067 11 C -0.151 4.151 12 C 0.560 3.440 13 O -0.580 6.580 14 N -0.693 5.693 15 C 0.113 3.887 16 H 0.085 0.915 17 C -0.123 4.123 18 C -0.066 4.066 19 H 0.119 0.881 20 C -0.056 4.056 21 C -0.115 4.115 22 C -0.100 4.100 23 C -0.110 4.110 24 Br -0.064 7.064 25 C -0.099 4.099 26 C -0.111 4.111 27 C -0.143 4.143 28 C -0.064 4.064 29 C -0.129 4.129 30 S 0.120 5.880 31 H 0.397 0.603 32 H 0.123 0.877 33 H -0.269 1.269 34 H -0.268 1.268 35 H 0.154 0.846 36 H 0.167 0.833 37 H 0.161 0.839 38 H 0.164 0.836 39 H 0.416 0.584 40 H 0.101 0.899 41 H 0.092 0.908 42 H 0.145 0.855 43 H 0.136 0.864 44 H 0.139 0.861 45 H 0.153 0.847 46 H 0.068 0.932 47 H 0.097 0.903 48 H 0.128 0.872 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.232 -3.171 1.953 4.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.138 4.138 3 Si 0.620 3.380 4 C -0.339 4.339 5 C -0.140 4.140 6 C -0.146 4.146 7 C -0.276 4.276 8 C 0.004 3.996 9 C -0.128 4.128 10 C -0.085 4.085 11 C -0.154 4.154 12 C 0.349 3.651 13 O -0.461 6.461 14 N -0.345 5.345 15 C 0.008 3.992 16 H 0.103 0.897 17 C -0.161 4.161 18 C -0.084 4.084 19 H 0.137 0.863 20 C -0.056 4.056 21 C -0.134 4.134 22 C -0.120 4.120 23 C -0.190 4.190 24 Br 0.021 6.979 25 C -0.119 4.119 26 C -0.130 4.130 27 C -0.182 4.182 28 C -0.083 4.083 29 C -0.148 4.148 30 S 0.388 5.612 31 H 0.247 0.753 32 H 0.140 0.860 33 H -0.194 1.194 34 H -0.194 1.194 35 H 0.171 0.829 36 H 0.185 0.815 37 H 0.178 0.822 38 H 0.182 0.818 39 H 0.255 0.745 40 H 0.120 0.880 41 H 0.110 0.890 42 H 0.163 0.837 43 H 0.154 0.846 44 H 0.157 0.843 45 H 0.171 0.829 46 H 0.087 0.913 47 H 0.116 0.884 48 H 0.146 0.854 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -1.589 -1.183 1.775 2.660 hybrid contribution -0.545 -1.696 0.617 1.886 sum -2.134 -2.880 2.392 4.309 Atomic orbital electron populations 1.86491 1.16516 1.82046 1.50412 1.24390 0.85298 1.08978 0.95108 0.94194 0.79515 0.76466 0.87875 1.25156 1.06998 0.99380 1.02346 1.20185 1.01234 0.94858 0.97723 1.20633 0.97679 1.01393 0.94940 1.23168 1.06636 0.98146 0.99633 1.18465 0.95142 0.94673 0.91305 1.21202 0.99987 0.96346 0.95282 1.21265 0.93788 0.98643 0.94806 1.20012 1.03176 0.96231 0.95986 1.18472 0.79650 0.82518 0.84500 1.90791 1.44479 1.43728 1.67052 1.45446 1.53105 1.12932 1.23003 1.21882 0.95638 0.98529 0.83179 0.89679 1.23372 0.97064 0.93839 1.01831 1.21710 0.99291 0.93370 0.94041 0.86294 1.20012 0.95112 0.95063 0.95441 1.21252 0.99662 1.00152 0.92322 1.21291 0.97969 0.93346 0.99370 1.21984 1.04166 0.98810 0.94015 1.96755 1.98461 1.69667 1.33019 1.21336 0.97785 1.00463 0.92332 1.21362 0.99288 0.94424 0.97914 1.23615 1.00458 0.95450 0.98663 1.20943 0.96580 0.96604 0.94156 1.21025 0.98370 0.99327 0.96041 1.84207 1.49210 1.13180 1.14626 0.75323 0.86034 1.19443 1.19403 0.82887 0.81547 0.82162 0.81844 0.74515 0.88032 0.88967 0.83694 0.84596 0.84325 0.82900 0.91290 0.88430 0.85371 0.84912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.86 12.86 -148.98 -1.92 -1.05 16 2 C -0.02 0.04 2.96 71.24 0.21 0.25 16 3 Si 0.72 -1.22 30.96 68.60 2.12 0.90 16 4 C -0.22 0.29 5.73 24.67 0.14 0.43 16 5 C -0.11 0.22 10.00 21.14 0.21 0.43 16 6 C -0.12 0.36 9.64 21.41 0.21 0.57 16 7 C -0.16 0.14 6.37 23.98 0.15 0.30 16 8 C 0.01 -0.01 5.88 -20.05 -0.12 -0.12 16 9 C -0.11 0.56 9.48 22.26 0.21 0.78 16 10 C -0.07 0.38 9.48 22.27 0.21 0.59 16 11 C -0.15 -0.11 5.88 -20.05 -0.12 -0.23 16 12 C 0.56 2.07 7.76 86.70 0.67 2.75 16 13 O -0.58 -7.46 15.95 -4.03 -0.06 -7.53 16 14 N -0.69 2.67 5.21 -443.16 -2.31 0.36 16 15 C 0.11 -0.38 4.29 45.52 0.20 -0.19 16 16 H 0.09 0.14 7.50 -2.39 -0.02 0.12 16 17 C -0.12 0.96 7.29 31.12 0.23 1.19 16 18 C -0.07 0.52 3.87 -10.92 -0.04 0.47 16 19 H 0.12 -1.34 8.09 -2.39 -0.02 -1.36 16 20 C -0.06 0.24 5.29 -19.86 -0.11 0.13 16 21 C -0.12 0.31 8.63 22.27 0.19 0.50 16 22 C -0.10 -0.02 9.79 22.29 0.22 0.20 16 23 C -0.11 -0.20 6.22 22.31 0.14 -0.06 16 24 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.89 16 25 C -0.10 0.06 9.79 22.28 0.22 0.28 16 26 C -0.11 0.43 9.71 22.26 0.22 0.64 16 27 C -0.14 0.66 7.27 31.21 0.23 0.88 16 28 C -0.06 -0.19 9.53 22.26 0.21 0.02 16 29 C -0.13 -0.12 9.54 22.26 0.21 0.09 16 30 S 0.12 -0.10 19.46 -56.49 -1.10 -1.19 16 31 H 0.40 -3.61 8.70 -74.06 -0.64 -4.25 16 32 H 0.12 -0.19 7.96 -2.39 -0.02 -0.21 16 33 H -0.27 -1.14 7.11 99.48 0.71 -0.44 16 34 H -0.27 -0.87 7.11 99.48 0.71 -0.16 16 35 H 0.15 -0.58 8.06 -2.91 -0.02 -0.60 16 36 H 0.17 -1.38 6.88 -2.91 -0.02 -1.40 16 37 H 0.16 -1.72 6.74 -2.91 -0.02 -1.74 16 38 H 0.16 -2.20 6.38 -2.91 -0.02 -2.22 16 39 H 0.42 -4.45 6.71 -92.71 -0.62 -5.07 16 40 H 0.10 -0.76 7.73 -2.39 -0.02 -0.78 16 41 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 42 H 0.15 -0.84 6.65 -2.91 -0.02 -0.86 16 43 H 0.14 -0.18 8.06 -2.91 -0.02 -0.21 16 44 H 0.14 -0.36 8.06 -2.91 -0.02 -0.39 16 45 H 0.15 -1.35 8.05 -2.91 -0.02 -1.37 16 46 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 47 H 0.10 -0.46 6.31 -2.39 -0.02 -0.47 16 48 H 0.13 0.61 7.64 -2.91 -0.02 0.59 16 49 H 0.13 -0.08 7.26 -2.91 -0.02 -0.10 16 Total: 0.00 -21.08 439.82 -0.46 -21.53 By element: Atomic # 1 Polarization: -21.84 SS G_CDS: -0.20 Total: -22.04 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 3.69 Total: 9.91 kcal Atomic # 7 Polarization: 2.67 SS G_CDS: -2.31 Total: 0.36 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -1.98 Total: -8.58 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: 2.12 Total: 0.90 kcal Atomic # 16 Polarization: -0.10 SS G_CDS: -1.10 Total: -1.19 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.89 kcal Total: -21.08 -0.46 -21.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.794 kcal (2) G-P(sol) polarization free energy of solvation -21.075 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.531 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds