Wall clock time and date at job start Sat Mar 6 2021 11:13:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35989 * 117.00593 * 2 1 4 4 C 1.38560 * 120.06184 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01613 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.25593 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73602 * 120.01189 * 180.25798 * 10 9 5 12 12 C 1.38624 * 119.97880 * 0.51481 * 10 9 5 13 13 O 1.36022 * 120.07722 * 179.72569 * 12 10 9 14 14 C 1.42900 * 116.99852 * 270.02047 * 13 12 10 15 15 C 1.53006 * 109.47157 * 270.00202 * 14 13 12 16 16 C 1.50699 * 109.47273 * 150.00005 * 14 13 12 17 17 O 1.21279 * 120.00121 * 4.99748 * 16 14 13 18 18 N 1.34782 * 119.99722 * 185.00172 * 16 14 13 19 19 C 1.46503 * 119.99286 * 180.02562 * 18 16 14 20 20 H 1.08998 * 112.85145 * 336.19080 * 19 18 16 21 21 C 1.53779 * 113.61342 * 107.50279 * 19 18 16 22 22 C 1.53783 * 87.08171 * 89.11362 * 21 19 18 23 23 H 1.09008 * 113.68482 * 270.86674 * 22 21 19 24 24 C 1.50702 * 113.61605 * 139.98111 * 22 21 19 25 25 C 1.38242 * 119.98879 * 322.22622 * 24 22 21 26 26 C 1.38218 * 120.00885 * 179.76934 * 25 24 22 27 27 C 1.38327 * 119.98833 * 0.50424 * 26 25 24 28 28 Br 1.89105 * 120.00967 * 179.76824 * 27 26 25 29 29 C 1.38322 * 119.98066 * 359.74696 * 27 26 25 30 30 C 1.38218 * 119.99286 * 359.97438 * 29 27 26 31 31 C 1.53777 * 87.08467 * 25.43065 * 22 21 19 32 32 H 1.08997 * 109.47068 * 59.99262 * 1 2 3 33 33 H 1.08995 * 109.47544 * 179.97438 * 1 2 3 34 34 H 1.09004 * 109.47169 * 299.99817 * 1 2 3 35 35 H 1.07991 * 119.99260 * 359.97438 * 4 3 2 36 36 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 37 37 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 38 38 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 39 39 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 40 40 H 1.07994 * 119.93816 * 179.72644 * 9 5 4 41 41 H 1.09001 * 109.47216 * 29.99930 * 14 13 12 42 42 H 1.09001 * 109.46835 * 299.99962 * 15 14 13 43 43 H 1.09000 * 109.47113 * 59.99413 * 15 14 13 44 44 H 1.08997 * 109.47304 * 179.97438 * 15 14 13 45 45 H 0.96990 * 120.00333 * 359.97438 * 18 16 14 46 46 H 1.09008 * 113.61144 * 203.65648 * 21 19 18 47 47 H 1.08993 * 113.62005 * 334.56208 * 21 19 18 48 48 H 1.07998 * 119.99451 * 0.02562 * 25 24 22 49 49 H 1.08001 * 120.00820 * 180.27395 * 26 25 24 50 50 H 1.08005 * 120.00732 * 179.97438 * 29 27 26 51 51 H 1.08000 * 120.00195 * 180.02562 * 30 29 27 52 52 H 1.08991 * 113.61619 * 220.02547 * 31 22 21 53 53 H 1.08999 * 113.68823 * 89.12399 * 31 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0011 6 6 1.1007 4.8696 0.0011 7 8 0.2767 4.9020 -1.1660 8 14 2.2349 6.3475 0.0011 9 6 3.3021 3.6810 -0.0043 10 6 4.0606 2.5236 0.0006 11 17 5.7939 2.6212 0.0006 12 6 3.4359 1.2861 0.0000 13 8 4.1795 0.1471 -0.0008 14 6 4.5342 -0.3951 -1.2745 15 6 3.4529 -1.3772 -1.7298 16 6 5.8531 -1.1158 -1.1641 17 8 6.3881 -1.2392 -0.0827 18 7 6.4381 -1.6233 -2.2672 19 6 7.7200 -2.3244 -2.1596 20 1 8.2902 -2.0311 -1.2782 21 6 7.6067 -3.8469 -2.3440 22 6 7.8070 -3.6005 -3.8487 23 1 6.8777 -3.4279 -4.3916 24 6 8.6930 -4.6214 -4.5149 25 6 9.7953 -5.1209 -3.8467 26 6 10.6054 -6.0608 -4.4555 27 6 10.3191 -6.4938 -5.7377 28 35 11.4309 -7.7748 -6.5737 29 6 9.2191 -5.9899 -6.4079 30 6 8.4061 -5.0543 -5.7961 31 6 8.5423 -2.3073 -3.4591 32 1 -0.3633 0.5139 -0.8899 33 1 -0.3634 -1.0276 -0.0005 34 1 -0.3634 0.5138 0.8900 35 1 0.2147 2.3192 0.0005 36 1 0.4715 4.8939 0.8908 37 1 0.7709 4.8830 -1.9970 38 1 1.4370 7.6000 0.0004 39 1 3.1195 6.3089 1.1931 40 1 3.7896 4.6446 -0.0083 41 1 4.6211 0.4122 -2.0017 42 1 3.3659 -2.1846 -1.0026 43 1 2.4989 -0.8559 -1.8096 44 1 3.7232 -1.7905 -2.7015 45 1 6.0102 -1.5250 -3.1320 46 1 8.4208 -4.4045 -1.8808 47 1 6.6235 -4.2451 -2.0938 48 1 10.0210 -4.7798 -2.8471 49 1 11.4641 -6.4543 -3.9317 50 1 8.9953 -6.3273 -7.4092 51 1 7.5470 -4.6610 -6.3192 52 1 8.3141 -1.4626 -4.1090 53 1 9.6121 -2.4426 -3.3005 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:13:59 Heat of formation + Delta-G solvation = -49.202855 kcal Electronic energy + Delta-G solvation = -39425.155339 eV Core-core repulsion = 34109.867333 eV Total energy + Delta-G solvation = -5315.288006 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 496.053 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.02795 -41.57184 -40.56804 -39.38464 -39.18046 -38.56887 -37.76345 -36.87768 -34.91112 -33.42482 -32.61718 -32.02300 -31.39692 -31.34014 -30.24936 -28.54070 -26.74426 -26.68979 -26.25303 -25.13271 -23.87672 -23.60830 -22.87878 -22.38860 -21.75620 -20.20262 -19.67167 -18.80113 -18.54735 -18.31825 -17.90546 -17.51718 -17.17087 -16.87600 -16.52179 -16.39020 -16.20986 -16.11059 -16.00702 -15.91108 -15.69063 -15.61367 -15.21119 -14.86507 -14.75710 -14.55359 -14.46842 -14.28923 -14.25373 -13.99658 -13.71379 -13.48215 -13.42754 -13.31798 -13.19084 -12.90903 -12.90112 -12.70741 -12.55676 -12.43831 -12.39204 -12.14352 -12.04335 -11.91273 -11.84268 -11.83157 -11.40570 -11.35335 -11.27910 -11.20626 -10.74517 -10.54205 -10.13306 -9.99387 -9.85662 -9.49947 -9.40682 -5.02729 -0.34134 -0.02315 0.06584 0.33467 0.66386 0.85782 1.24706 1.47721 1.60592 1.64638 1.94460 2.16268 2.23103 2.57580 2.68768 3.34360 3.45994 3.55061 3.56323 3.66335 3.70830 3.76407 3.82270 3.84318 3.85102 3.95972 3.96346 3.99789 4.03831 4.05340 4.21554 4.31845 4.36628 4.37173 4.42733 4.44353 4.59870 4.63897 4.70672 4.72404 4.73173 4.75972 4.78820 4.84273 4.86297 4.90876 5.03398 5.06182 5.08678 5.14720 5.19112 5.24141 5.24844 5.25731 5.49876 5.65768 5.85266 5.92776 6.32720 6.49758 6.74403 7.16382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.164 4.164 5 C -0.063 4.063 6 C -0.063 4.063 7 O -0.546 6.546 8 Si 0.761 3.239 9 C -0.135 4.135 10 C -0.023 4.023 11 Cl -0.049 7.049 12 C 0.054 3.946 13 O -0.310 6.310 14 C 0.074 3.926 15 C -0.161 4.161 16 C 0.519 3.481 17 O -0.562 6.562 18 N -0.694 5.694 19 C 0.115 3.885 20 H 0.082 0.918 21 C -0.143 4.143 22 C -0.064 4.064 23 H 0.121 0.879 24 C -0.056 4.056 25 C -0.116 4.116 26 C -0.100 4.100 27 C -0.110 4.110 28 Br -0.064 7.064 29 C -0.099 4.099 30 C -0.111 4.111 31 C -0.123 4.123 32 H 0.075 0.925 33 H 0.118 0.882 34 H 0.063 0.937 35 H 0.160 0.840 36 H 0.121 0.879 37 H 0.398 0.602 38 H -0.291 1.291 39 H -0.288 1.288 40 H 0.156 0.844 41 H 0.107 0.893 42 H 0.055 0.945 43 H 0.081 0.919 44 H 0.101 0.899 45 H 0.418 0.582 46 H 0.095 0.905 47 H 0.070 0.930 48 H 0.144 0.856 49 H 0.136 0.864 50 H 0.139 0.861 51 H 0.154 0.846 52 H 0.092 0.908 53 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.314 2.543 -7.601 9.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.174 4.174 7 O -0.354 6.354 8 Si 0.667 3.333 9 C -0.154 4.154 10 C -0.050 4.050 11 Cl -0.020 7.020 12 C 0.008 3.992 13 O -0.226 6.226 14 C 0.015 3.985 15 C -0.218 4.218 16 C 0.305 3.695 17 O -0.439 6.439 18 N -0.347 5.347 19 C 0.010 3.990 20 H 0.100 0.900 21 C -0.182 4.182 22 C -0.083 4.083 23 H 0.139 0.861 24 C -0.056 4.056 25 C -0.134 4.134 26 C -0.120 4.120 27 C -0.190 4.190 28 Br 0.021 6.979 29 C -0.119 4.119 30 C -0.129 4.129 31 C -0.161 4.161 32 H 0.094 0.906 33 H 0.136 0.864 34 H 0.081 0.919 35 H 0.178 0.822 36 H 0.138 0.862 37 H 0.248 0.752 38 H -0.218 1.218 39 H -0.215 1.215 40 H 0.173 0.827 41 H 0.124 0.876 42 H 0.074 0.926 43 H 0.100 0.900 44 H 0.120 0.880 45 H 0.256 0.744 46 H 0.114 0.886 47 H 0.089 0.911 48 H 0.162 0.838 49 H 0.153 0.847 50 H 0.157 0.843 51 H 0.172 0.828 52 H 0.111 0.889 53 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -4.425 2.405 -6.135 7.937 hybrid contribution -0.449 -0.207 0.437 0.660 sum -4.874 2.197 -5.698 7.813 Atomic orbital electron populations 1.23453 0.76046 1.05889 1.02687 1.86213 1.23432 1.25177 1.87720 1.19217 0.90453 0.86125 0.96195 1.21294 1.01676 0.90097 1.05169 1.20203 0.92581 0.96094 0.97541 1.25055 0.99541 1.00684 0.92086 1.86493 1.36081 1.96738 1.16116 0.93808 0.78256 0.74089 0.87157 1.20894 0.93020 0.97190 1.04254 1.21086 0.85961 0.93651 1.04335 1.98415 1.08510 1.98462 1.96600 1.17783 0.87331 0.85384 1.08662 1.86256 1.69901 1.38130 1.28281 1.22343 0.92747 0.97603 0.85802 1.22243 0.98202 0.98868 1.02489 1.20580 0.86084 0.78524 0.84287 1.90741 1.65342 1.58757 1.29055 1.45405 1.22475 1.56862 1.10004 1.21852 0.84675 0.92634 0.99879 0.90015 1.23564 1.03265 0.95832 0.95503 1.21657 0.98429 0.93278 0.94894 0.86126 1.20020 0.95094 0.96418 0.94093 1.21243 0.94619 0.96657 1.00897 1.21286 1.00316 0.97232 0.93167 1.21981 0.98812 1.00710 0.97463 1.96753 1.65930 1.54795 1.80422 1.21339 0.93222 0.96781 1.00550 1.21363 1.00114 0.96630 0.94807 1.23374 1.00006 0.97592 0.95138 0.90645 0.86380 0.91873 0.82206 0.86213 0.75150 1.21849 1.21536 0.82729 0.87564 0.92555 0.90034 0.88039 0.74411 0.88619 0.91134 0.83824 0.84653 0.84291 0.82847 0.88946 0.88187 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.31 -0.32 8.19 -79.56 -0.65 -0.97 16 3 C 0.13 0.24 6.54 22.56 0.15 0.39 16 4 C -0.16 0.31 8.60 22.36 0.19 0.50 16 5 C -0.06 0.16 5.39 -19.86 -0.11 0.05 16 6 C -0.06 0.28 2.82 71.24 0.20 0.48 16 7 O -0.55 2.74 12.76 -148.98 -1.90 0.84 16 8 Si 0.76 -3.06 29.78 68.60 2.04 -1.01 16 9 C -0.14 0.10 8.45 22.30 0.19 0.29 16 10 C -0.02 -0.09 6.33 22.40 0.14 0.06 16 11 Cl -0.05 -0.28 28.50 -2.72 -0.08 -0.36 16 12 C 0.05 0.29 5.56 22.58 0.13 0.41 16 13 O -0.31 -2.74 8.48 -67.41 -0.57 -3.31 16 14 C 0.07 0.12 3.19 29.85 0.10 0.21 16 15 C -0.16 0.48 9.05 71.98 0.65 1.13 16 16 C 0.52 2.53 7.18 87.66 0.63 3.16 16 17 O -0.56 -8.82 16.11 15.96 0.26 -8.56 16 18 N -0.69 2.31 5.22 -440.02 -2.30 0.01 16 19 C 0.12 -0.29 4.32 45.52 0.20 -0.10 16 20 H 0.08 0.26 7.46 -2.39 -0.02 0.24 16 21 C -0.14 0.58 7.25 31.12 0.23 0.80 16 22 C -0.06 0.48 3.86 -11.01 -0.04 0.44 16 23 H 0.12 -1.35 8.09 -2.38 -0.02 -1.37 16 24 C -0.06 0.22 5.29 -19.86 -0.11 0.11 16 25 C -0.12 0.25 8.60 22.27 0.19 0.44 16 26 C -0.10 -0.06 9.79 22.29 0.22 0.16 16 27 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 28 Br -0.06 -0.22 33.70 -20.37 -0.69 -0.91 16 29 C -0.10 0.04 9.79 22.28 0.22 0.26 16 30 C -0.11 0.41 9.71 22.27 0.22 0.62 16 31 C -0.12 0.88 7.29 31.12 0.23 1.11 16 32 H 0.08 -0.71 7.66 -2.39 -0.02 -0.73 16 33 H 0.12 -1.06 8.14 -2.39 -0.02 -1.08 16 34 H 0.06 -0.44 7.66 -2.38 -0.02 -0.46 16 35 H 0.16 -0.84 6.30 -2.92 -0.02 -0.86 16 36 H 0.12 -0.48 7.96 -2.39 -0.02 -0.50 16 37 H 0.40 -5.17 8.70 -74.05 -0.64 -5.81 16 38 H -0.29 -0.87 7.11 99.48 0.71 -0.17 16 39 H -0.29 -0.56 7.11 99.48 0.71 0.14 16 40 H 0.16 -0.61 4.86 -2.91 -0.01 -0.62 16 41 H 0.11 -0.31 7.91 -2.39 -0.02 -0.33 16 42 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 43 H 0.08 -0.25 6.28 -2.39 -0.01 -0.26 16 44 H 0.10 -0.97 7.92 -2.39 -0.02 -0.99 16 45 H 0.42 -4.40 8.48 -92.72 -0.79 -5.19 16 46 H 0.10 -0.36 6.32 -2.38 -0.02 -0.38 16 47 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 48 H 0.14 -0.73 6.67 -2.91 -0.02 -0.75 16 49 H 0.14 -0.11 8.06 -2.91 -0.02 -0.14 16 50 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 51 H 0.15 -1.33 8.05 -2.91 -0.02 -1.36 16 52 H 0.09 -0.86 8.14 -2.39 -0.02 -0.87 16 53 H 0.10 -0.66 7.72 -2.39 -0.02 -0.68 16 Total: 0.00 -26.02 468.76 0.58 -25.44 By element: Atomic # 1 Polarization: -22.24 SS G_CDS: -0.40 Total: -22.64 kcal Atomic # 6 Polarization: 6.61 SS G_CDS: 4.86 Total: 11.47 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -2.30 Total: 0.01 kcal Atomic # 8 Polarization: -9.14 SS G_CDS: -2.87 Total: -12.00 kcal Atomic # 14 Polarization: -3.06 SS G_CDS: 2.04 Total: -1.01 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -0.08 Total: -0.36 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.69 Total: -0.91 kcal Total: -26.02 0.58 -25.44 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.761 kcal (2) G-P(sol) polarization free energy of solvation -26.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.203 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds