Wall clock time and date at job start Sat Mar 6 2021 11:14:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.32691 * 124.68405 * 299.99175 * 4 2 1 6 6 C 1.44504 * 113.10129 * 179.97438 * 5 4 2 7 7 C 1.47043 * 123.49234 * 180.02562 * 6 5 4 8 8 O 1.21660 * 119.99688 * 180.02562 * 7 6 5 9 9 N 1.34773 * 120.00506 * 0.02562 * 7 6 5 10 10 C 1.46495 * 120.00179 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85149 * 23.80291 * 10 9 7 12 12 C 1.53787 * 113.61355 * 154.99868 * 10 9 7 13 13 C 1.53781 * 87.07940 * 89.11374 * 12 10 9 14 14 H 1.09001 * 113.61469 * 270.87952 * 13 12 10 15 15 C 1.50700 * 113.61108 * 140.06500 * 13 12 10 16 16 C 1.38241 * 119.99386 * 299.72784 * 15 13 12 17 17 C 1.38220 * 120.01247 * 179.72815 * 16 15 13 18 18 C 1.38324 * 119.98710 * 0.54158 * 17 16 15 19 19 Br 1.89101 * 120.00893 * 179.70593 * 18 17 16 20 20 C 1.38319 * 119.98016 * 359.73158 * 18 17 16 21 21 C 1.38213 * 119.99473 * 359.97438 * 20 18 17 22 22 C 1.53771 * 87.08243 * 25.43559 * 13 12 10 23 23 C 1.36229 * 113.01449 * 0.02562 * 6 5 4 24 24 Cl 1.73601 * 124.60438 * 180.02562 * 23 6 5 25 25 S 1.70442 * 110.78631 * 359.76226 * 23 6 5 26 26 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 27 27 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 28 28 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 29 29 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 30 30 H 1.07999 * 123.45150 * 0.02562 * 5 4 2 31 31 H 0.97005 * 119.99387 * 359.97438 * 9 7 6 32 32 H 1.08997 * 113.61431 * 203.66652 * 12 10 9 33 33 H 1.08996 * 113.61207 * 334.56506 * 12 10 9 34 34 H 1.07997 * 119.99005 * 359.97438 * 16 15 13 35 35 H 1.07995 * 120.00517 * 180.25174 * 17 16 15 36 36 H 1.08003 * 120.00397 * 179.97438 * 20 18 17 37 37 H 1.07998 * 120.00165 * 180.02562 * 21 20 18 38 38 H 1.09003 * 113.61464 * 220.01852 * 22 13 12 39 39 H 1.08996 * 113.62121 * 89.11086 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.6688 -1.9756 -1.5320 6 6 2.2769 -2.4009 -2.7719 7 6 2.1341 -3.7568 -3.3225 8 8 2.6748 -4.0468 -4.3731 9 7 1.4041 -4.6784 -2.6635 10 6 1.2614 -6.0291 -3.2124 11 1 2.0741 -6.3003 -3.8862 12 6 0.9608 -7.0979 -2.1483 13 6 -0.5291 -6.7910 -2.3741 14 1 -0.9123 -5.9944 -1.7365 15 6 -1.4054 -8.0170 -2.3693 16 6 -1.1955 -9.0201 -3.2972 17 6 -1.9954 -10.1473 -3.2896 18 6 -3.0132 -10.2665 -2.3604 19 35 -4.1132 -11.8047 -2.3548 20 6 -3.2264 -9.2601 -1.4359 21 6 -2.4222 -8.1360 -1.4403 22 6 -0.1371 -6.3174 -3.7836 23 6 2.9963 -1.4154 -3.3778 24 17 3.8493 -1.5981 -4.8788 25 16 2.9392 0.0232 -2.4657 26 1 -0.3934 0.4416 -0.7651 27 1 1.7924 -0.5138 0.8900 28 1 1.5613 2.4680 1.2084 29 1 3.5344 1.7705 -0.0322 30 1 1.0620 -2.6212 -0.9144 31 1 0.9733 -4.4473 -1.8257 32 1 1.2494 -8.1054 -2.4477 33 1 1.3149 -6.8337 -1.1519 34 1 -0.4039 -8.9247 -4.0256 35 1 -1.8288 -10.9327 -4.0119 36 1 -4.0213 -9.3526 -0.7105 37 1 -2.5883 -7.3503 -0.7182 38 1 -0.6693 -5.4229 -4.1074 39 1 -0.1486 -7.1114 -4.5301 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:14:07 Heat of formation + Delta-G solvation = 20.883644 kcal Electronic energy + Delta-G solvation = -26608.298637 eV Core-core repulsion = 22489.179297 eV Total energy + Delta-G solvation = -4119.119340 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.964 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.74741 -40.63519 -39.33412 -38.68227 -37.88120 -37.01325 -34.68402 -33.02438 -32.11128 -31.73149 -30.37791 -27.13764 -26.86381 -26.67099 -25.18942 -23.91365 -22.48987 -22.31817 -20.89885 -20.24851 -19.48926 -18.23986 -18.02448 -17.72182 -17.01124 -16.62997 -16.51686 -16.24333 -16.00413 -15.80705 -15.78787 -15.25500 -14.99151 -14.71236 -14.62431 -14.42152 -14.35320 -14.30916 -14.13731 -13.61471 -13.47670 -13.06802 -12.93309 -12.57240 -12.50280 -12.44967 -12.11634 -12.09306 -12.00524 -11.93453 -11.46422 -11.33732 -11.22484 -10.90544 -10.72056 -10.17528 -10.06865 -9.94938 -9.73574 -9.54107 -5.33165 -0.64406 -0.25248 0.01010 0.25811 0.38706 0.63971 0.67165 1.00187 1.05269 1.41137 1.74171 2.06729 2.21197 2.50047 3.09790 3.30353 3.35024 3.51351 3.56692 3.70630 3.76609 3.81399 3.83088 3.86087 4.02941 4.18347 4.25639 4.30428 4.33187 4.51439 4.58645 4.62127 4.64567 4.73789 4.78122 4.84731 4.88565 4.92764 5.00187 5.17075 5.17718 5.43083 5.54494 5.74889 6.27585 6.38738 7.15605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.649 3.351 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.160 4.160 7 C 0.579 3.421 8 O -0.515 6.515 9 N -0.707 5.707 10 C 0.122 3.878 11 H 0.108 0.892 12 C -0.135 4.135 13 C -0.077 4.077 14 H 0.100 0.900 15 C -0.055 4.055 16 C -0.111 4.111 17 C -0.087 4.087 18 C -0.095 4.095 19 Br -0.051 7.051 20 C -0.088 4.088 21 C -0.110 4.110 22 C -0.143 4.143 23 C -0.114 4.114 24 Cl 0.028 6.972 25 S 0.238 5.762 26 H 0.383 0.617 27 H 0.128 0.872 28 H -0.228 1.228 29 H -0.233 1.233 30 H 0.157 0.843 31 H 0.400 0.600 32 H 0.100 0.900 33 H 0.078 0.922 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.131 0.869 38 H 0.077 0.923 39 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.045 3.836 2.363 4.625 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.548 3.452 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.365 3.635 8 O -0.391 6.391 9 N -0.359 5.359 10 C 0.016 3.984 11 H 0.126 0.874 12 C -0.173 4.173 13 C -0.095 4.095 14 H 0.118 0.882 15 C -0.055 4.055 16 C -0.130 4.130 17 C -0.107 4.107 18 C -0.174 4.174 19 Br 0.035 6.965 20 C -0.108 4.108 21 C -0.129 4.129 22 C -0.182 4.182 23 C -0.261 4.261 24 Cl 0.057 6.943 25 S 0.503 5.497 26 H 0.231 0.769 27 H 0.145 0.855 28 H -0.151 1.151 29 H -0.157 1.157 30 H 0.174 0.826 31 H 0.236 0.764 32 H 0.118 0.882 33 H 0.097 0.903 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.149 0.851 38 H 0.095 0.905 39 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 0.217 4.758 2.243 5.264 hybrid contribution -0.561 -1.711 0.575 1.890 sum -0.344 3.047 2.818 4.164 Atomic orbital electron populations 1.86537 1.16312 1.81639 1.49301 1.24426 0.85376 1.09139 0.94831 0.95058 0.82417 0.77411 0.90329 1.24807 1.07995 0.99280 1.03226 1.20983 0.99318 0.95046 0.94641 1.20200 1.04674 0.95461 0.97563 1.17387 0.78586 0.83465 0.84103 1.90887 1.46513 1.79886 1.21828 1.45478 1.52918 1.11204 1.26318 1.21845 0.98635 0.81345 0.96546 0.87362 1.23436 0.94357 0.99689 0.99821 1.21654 0.93984 0.95094 0.98754 0.88193 1.19834 0.95472 0.95398 0.94842 1.21044 0.99836 0.93081 0.99050 1.21144 0.93771 0.98354 0.97435 1.21857 0.99251 0.95018 1.01285 1.96780 1.65988 1.35111 1.98657 1.21147 0.99482 0.92651 0.97498 1.21089 0.95090 0.97765 0.98978 1.23575 0.96366 1.02256 0.95986 1.25541 1.02849 1.00895 0.96801 1.98446 1.73283 1.97062 1.25533 1.83353 1.46947 1.08359 1.11021 0.76939 0.85487 1.15072 1.15741 0.82577 0.76434 0.88165 0.90325 0.84927 0.84888 0.84930 0.85122 0.90462 0.88491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.36 12.85 -35.23 -0.45 0.91 16 2 C -0.02 0.07 2.95 36.00 0.11 0.17 16 3 Si 0.65 -1.88 30.91 -169.99 -5.25 -7.13 16 4 C -0.24 0.50 5.68 -36.20 -0.21 0.29 16 5 C -0.07 0.12 9.71 -39.00 -0.38 -0.26 16 6 C -0.16 -0.11 5.98 -104.58 -0.63 -0.74 16 7 C 0.58 1.14 7.79 -12.69 -0.10 1.04 16 8 O -0.52 -2.80 14.51 5.22 0.08 -2.72 16 9 N -0.71 0.79 5.24 -54.21 -0.28 0.50 16 10 C 0.12 -0.16 4.33 -67.12 -0.29 -0.45 16 11 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 12 C -0.14 0.37 7.29 -25.92 -0.19 0.18 16 13 C -0.08 0.20 3.85 -90.96 -0.35 -0.15 16 14 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 15 C -0.06 0.06 5.29 -104.62 -0.55 -0.49 16 16 C -0.11 0.09 8.63 -39.59 -0.34 -0.25 16 17 C -0.09 -0.02 9.79 -39.56 -0.39 -0.40 16 18 C -0.09 -0.10 6.22 -39.52 -0.25 -0.34 16 19 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 20 C -0.09 -0.02 9.79 -39.56 -0.39 -0.40 16 21 C -0.11 0.09 9.71 -39.59 -0.38 -0.29 16 22 C -0.14 0.26 7.25 -25.92 -0.19 0.07 16 23 C -0.11 -0.14 6.87 30.01 0.21 0.07 16 24 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 25 S 0.24 -0.34 20.17 -107.50 -2.17 -2.51 16 26 H 0.38 -2.33 8.70 45.56 0.40 -1.94 16 27 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 28 H -0.23 0.02 7.11 56.52 0.40 0.42 16 29 H -0.23 0.19 7.11 56.52 0.40 0.60 16 30 H 0.16 -0.59 7.10 -52.49 -0.37 -0.97 16 31 H 0.40 -1.42 7.24 -40.82 -0.30 -1.71 16 32 H 0.10 -0.28 7.73 -51.93 -0.40 -0.68 16 33 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 34 H 0.13 -0.32 6.65 -52.49 -0.35 -0.67 16 35 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.13 -0.12 8.06 -52.48 -0.42 -0.54 16 37 H 0.13 -0.35 8.05 -52.49 -0.42 -0.77 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.10 -0.20 6.31 -51.93 -0.33 -0.53 16 LS Contribution 377.61 15.07 5.69 5.69 Total: 0.00 -7.00 377.61 -14.29 -21.29 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -3.88 Total: -10.38 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -4.31 Total: -1.95 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.28 Total: 0.50 kcal Atomic # 8 Polarization: -1.44 SS G_CDS: -0.38 Total: -1.81 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.25 Total: -7.13 kcal Atomic # 16 Polarization: -0.34 SS G_CDS: -2.17 Total: -2.51 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -7.00 -14.29 -21.29 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.175 kcal (2) G-P(sol) polarization free energy of solvation -7.000 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.291 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.884 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds