Wall clock time and date at job start Sat Mar 6 2021 11:14:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37873 * 126.45380 * 2 1 4 4 C 1.46681 * 126.23758 * 359.96205 * 3 2 1 5 5 O 1.21698 * 119.99865 * 0.32314 * 4 3 2 6 6 N 1.34776 * 119.99956 * 180.33017 * 4 3 2 7 7 C 1.46501 * 119.99727 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.84900 * 25.33230 * 7 6 4 9 9 C 1.53780 * 113.61563 * 156.52630 * 7 6 4 10 10 C 1.53789 * 87.07883 * 89.11560 * 9 7 6 11 11 H 1.08996 * 113.61646 * 270.80307 * 10 9 7 12 12 C 1.50697 * 113.61149 * 139.98280 * 10 9 7 13 13 C 1.38241 * 119.99059 * 299.72384 * 12 10 9 14 14 C 1.38220 * 120.01035 * 179.76718 * 13 12 10 15 15 C 1.38325 * 119.98713 * 0.51542 * 14 13 12 16 16 Br 1.89106 * 120.00850 * 179.76897 * 15 14 13 17 17 C 1.38320 * 119.98131 * 359.73664 * 15 14 13 18 18 C 1.38212 * 119.99014 * 0.02562 * 17 15 14 19 19 C 1.53777 * 113.61741 * 254.13774 * 7 6 4 20 20 N 1.37656 * 107.53267 * 180.25736 * 3 2 1 21 21 C 1.35538 * 108.64156 * 359.73512 * 20 3 2 22 22 C 1.50694 * 125.56560 * 180.02562 * 21 20 3 23 23 O 1.42901 * 109.46976 * 65.00355 * 22 21 20 24 24 Si 1.86294 * 109.47254 * 185.00124 * 22 21 20 25 25 C 1.35459 * 108.87083 * 359.97438 * 21 20 3 26 26 H 1.09003 * 109.46924 * 270.21774 * 1 2 3 27 27 H 1.09003 * 109.47294 * 30.21228 * 1 2 3 28 28 H 1.08996 * 109.47194 * 150.21798 * 1 2 3 29 29 H 0.96990 * 119.99923 * 359.97438 * 6 4 3 30 30 H 1.08995 * 113.61604 * 203.66524 * 9 7 6 31 31 H 1.09002 * 113.61421 * 334.49316 * 9 7 6 32 32 H 1.08004 * 119.99826 * 0.02562 * 13 12 10 33 33 H 1.08001 * 120.00465 * 180.23481 * 14 13 12 34 34 H 1.08001 * 120.00632 * 179.97438 * 17 15 14 35 35 H 1.08001 * 119.99826 * 179.97438 * 18 17 15 36 36 H 1.09002 * 113.61440 * 25.42895 * 19 7 6 37 37 H 1.08994 * 113.61968 * 156.33345 * 19 7 6 38 38 H 0.96994 * 125.68303 * 179.73418 * 20 3 2 39 39 H 1.08998 * 109.47232 * 305.00421 * 22 21 20 40 40 H 0.96695 * 114.00637 * 179.97438 * 23 22 21 41 41 H 1.48498 * 110.00457 * 300.00178 * 24 22 21 42 42 H 1.48500 * 110.00186 * 61.32241 * 24 22 21 43 43 H 1.08002 * 126.06353 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1090 0.0000 4 6 1.8898 2.5093 -0.0008 5 8 0.7026 2.7767 0.0044 6 7 2.8037 3.5000 -0.0074 7 6 2.3677 4.8986 -0.0088 8 1 1.3771 5.0336 0.4253 9 6 3.4209 5.8726 0.5453 10 6 3.9595 5.9835 -0.8910 11 1 4.7200 5.2404 -1.1307 12 6 4.3659 7.3823 -1.2769 13 6 3.4326 8.4020 -1.2621 14 6 3.8061 9.6862 -1.6114 15 6 5.1115 9.9488 -1.9860 16 35 5.6216 11.7042 -2.4703 17 6 6.0438 8.9272 -2.0057 18 6 5.6706 7.6444 -1.6516 19 6 2.5458 5.5981 -1.3666 20 7 3.6284 0.6626 -0.0059 21 6 3.6218 -0.6928 -0.0036 22 6 4.8433 -1.5752 -0.0077 23 8 5.5685 -1.3906 1.2097 24 14 4.3214 -3.3575 -0.1554 25 6 2.3379 -1.1246 0.0043 26 1 -0.3633 0.0039 1.0277 27 1 -0.3634 0.8881 -0.5171 28 1 -0.3633 -0.8919 -0.5104 29 1 3.7499 3.2868 -0.0113 30 1 2.9983 6.8024 0.9261 31 1 4.1208 5.4096 1.2408 32 1 2.4124 8.1961 -0.9736 33 1 3.0777 10.4835 -1.5961 34 1 7.0630 9.1317 -2.2985 35 1 6.3983 6.8465 -1.6673 36 1 2.5406 4.9132 -2.2146 37 1 1.8844 6.4529 -1.5076 38 1 4.4190 1.2244 -0.0109 39 1 5.4791 -1.3116 -0.8529 40 1 6.3689 -1.9290 1.2763 41 1 3.4540 -3.7294 0.9911 42 1 3.5939 -3.5695 -1.4324 43 1 2.0137 -2.1548 0.0075 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:14:14 Heat of formation + Delta-G solvation = 32.787725 kcal Electronic energy + Delta-G solvation = -26769.606923 eV Core-core repulsion = 22828.913940 eV Total energy + Delta-G solvation = -3940.692983 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.74667 -41.51240 -40.21479 -38.83104 -37.64704 -35.04145 -33.68229 -33.08792 -32.07821 -31.78532 -30.35121 -28.36216 -27.20231 -26.76966 -25.69491 -23.96662 -23.02992 -22.33128 -21.69666 -20.64811 -20.11127 -19.56641 -18.46561 -18.06115 -17.12779 -16.89956 -16.54252 -16.51141 -16.14928 -15.79252 -15.39509 -15.32568 -15.15401 -14.93158 -14.76776 -14.51068 -14.48006 -14.28598 -13.93684 -13.73385 -13.52997 -13.48441 -13.38819 -13.14664 -12.93743 -12.56745 -12.44458 -12.11228 -12.02783 -11.91254 -11.46727 -11.31201 -11.27885 -11.22787 -10.45482 -10.30036 -10.03793 -10.00495 -9.54485 -9.32157 -4.94505 0.02236 0.16765 0.29458 0.63223 1.18757 1.33593 1.73891 1.83872 2.02062 2.10010 2.12287 2.53159 3.29297 3.37247 3.59633 3.60590 3.71466 3.78860 3.82262 3.89862 3.92178 3.92560 4.06847 4.13966 4.32788 4.37378 4.38372 4.50325 4.56175 4.62005 4.67493 4.72679 4.73976 4.78011 4.83013 4.95536 4.98782 5.01073 5.05073 5.16544 5.20771 5.20969 5.39206 5.48796 5.59075 5.66321 5.80792 6.20426 6.38603 6.85102 6.98094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.087 4.087 3 C -0.065 4.065 4 C 0.593 3.407 5 O -0.558 6.558 6 N -0.699 5.699 7 C 0.115 3.885 8 H 0.090 0.910 9 C -0.123 4.123 10 C -0.066 4.066 11 H 0.115 0.885 12 C -0.057 4.057 13 C -0.115 4.115 14 C -0.099 4.099 15 C -0.110 4.110 16 Br -0.063 7.063 17 C -0.099 4.099 18 C -0.112 4.112 19 C -0.142 4.142 20 N -0.506 5.506 21 C 0.073 3.927 22 C -0.060 4.060 23 O -0.564 6.564 24 Si 0.808 3.192 25 C -0.233 4.233 26 H 0.068 0.932 27 H 0.069 0.931 28 H 0.074 0.926 29 H 0.409 0.591 30 H 0.104 0.896 31 H 0.088 0.912 32 H 0.146 0.854 33 H 0.137 0.863 34 H 0.139 0.861 35 H 0.152 0.848 36 H 0.067 0.933 37 H 0.101 0.899 38 H 0.432 0.568 39 H 0.108 0.892 40 H 0.410 0.590 41 H -0.301 1.301 42 H -0.291 1.291 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.145 -3.983 -0.332 9.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.096 4.096 3 C -0.179 4.179 4 C 0.382 3.618 5 O -0.436 6.436 6 N -0.350 5.350 7 C 0.010 3.990 8 H 0.108 0.892 9 C -0.161 4.161 10 C -0.084 4.084 11 H 0.133 0.867 12 C -0.057 4.057 13 C -0.133 4.133 14 C -0.119 4.119 15 C -0.189 4.189 16 Br 0.023 6.977 17 C -0.118 4.118 18 C -0.131 4.131 19 C -0.180 4.180 20 N -0.104 5.104 21 C -0.046 4.046 22 C -0.170 4.170 23 O -0.375 6.375 24 Si 0.713 3.287 25 C -0.257 4.257 26 H 0.086 0.914 27 H 0.087 0.913 28 H 0.092 0.908 29 H 0.246 0.754 30 H 0.123 0.877 31 H 0.107 0.893 32 H 0.164 0.836 33 H 0.155 0.845 34 H 0.157 0.843 35 H 0.169 0.831 36 H 0.086 0.914 37 H 0.119 0.881 38 H 0.273 0.727 39 H 0.126 0.874 40 H 0.262 0.738 41 H -0.229 1.229 42 H -0.218 1.218 43 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 6.500 -3.080 -0.467 7.208 hybrid contribution 0.216 0.546 -0.041 0.589 sum 6.717 -2.534 -0.508 7.197 Atomic orbital electron populations 1.20340 0.88982 1.02961 1.02397 1.20135 0.96499 0.91124 1.01842 1.20129 0.84327 0.93206 1.20203 1.17047 0.85666 0.83360 0.75750 1.90823 1.17532 1.83590 1.51693 1.45393 1.09476 1.05235 1.74863 1.21907 0.99623 0.79517 0.97981 0.89216 1.23379 0.97321 0.99498 0.95906 1.21686 0.97234 0.92966 0.96502 0.86686 1.19990 0.93399 0.95492 0.96862 1.21254 1.00742 0.91538 0.99800 1.21301 0.94342 0.98298 0.97932 1.21989 0.97295 0.91632 1.07991 1.96758 1.92281 1.17066 1.91644 1.21329 0.99512 0.92320 0.98687 1.21345 0.96492 0.96508 0.98744 1.23615 0.96577 1.00784 0.97059 1.41763 1.06953 1.06351 1.55333 1.20405 0.95748 0.83262 1.05187 1.24592 0.92413 1.08758 0.91199 1.86431 1.43571 1.70561 1.36959 0.94291 0.84185 0.74120 0.76150 1.20631 0.92100 0.98705 1.14239 0.91383 0.91260 0.90759 0.75435 0.87725 0.89293 0.83614 0.84471 0.84273 0.83076 0.91418 0.88089 0.72726 0.87402 0.73751 1.22856 1.21797 0.84193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.74 9.82 71.24 0.70 -0.04 16 2 C -0.09 -0.79 6.21 -19.56 -0.12 -0.91 16 3 C -0.07 -0.39 7.06 40.35 0.28 -0.11 16 4 C 0.59 3.83 7.79 86.45 0.67 4.50 16 5 O -0.56 -7.78 14.43 -4.34 -0.06 -7.85 16 6 N -0.70 1.26 5.26 -444.00 -2.34 -1.08 16 7 C 0.11 -0.27 4.29 45.52 0.20 -0.07 16 8 H 0.09 0.19 7.50 -2.39 -0.02 0.18 16 9 C -0.12 0.84 7.29 31.12 0.23 1.06 16 10 C -0.07 0.45 3.87 -10.92 -0.04 0.41 16 11 H 0.12 -1.14 8.09 -2.39 -0.02 -1.16 16 12 C -0.06 0.21 5.29 -19.86 -0.11 0.10 16 13 C -0.11 0.27 8.62 22.27 0.19 0.46 16 14 C -0.10 -0.04 9.79 22.29 0.22 0.18 16 15 C -0.11 -0.22 6.22 22.31 0.14 -0.08 16 16 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.89 16 17 C -0.10 0.03 9.79 22.28 0.22 0.25 16 18 C -0.11 0.36 9.71 22.26 0.22 0.58 16 19 C -0.14 0.54 7.27 31.21 0.23 0.77 16 20 N -0.51 0.00 5.99 -171.92 -1.03 -1.03 16 21 C 0.07 0.17 6.50 41.34 0.27 0.44 16 22 C -0.06 0.31 3.07 71.23 0.22 0.53 16 23 O -0.56 3.12 12.86 -148.98 -1.92 1.20 16 24 Si 0.81 -3.91 30.56 68.60 2.10 -1.81 16 25 C -0.23 -1.61 9.27 22.01 0.20 -1.41 16 26 H 0.07 0.55 8.14 -2.39 -0.02 0.53 16 27 H 0.07 0.76 6.50 -2.39 -0.02 0.75 16 28 H 0.07 0.39 8.14 -2.39 -0.02 0.37 16 29 H 0.41 -3.30 7.83 -92.72 -0.73 -4.03 16 30 H 0.10 -0.71 7.73 -2.39 -0.02 -0.73 16 31 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 32 H 0.15 -0.81 6.64 -2.91 -0.02 -0.83 16 33 H 0.14 -0.17 8.06 -2.91 -0.02 -0.20 16 34 H 0.14 -0.32 8.06 -2.91 -0.02 -0.35 16 35 H 0.15 -1.21 8.05 -2.91 -0.02 -1.23 16 36 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 37 H 0.10 -0.44 6.30 -2.39 -0.02 -0.45 16 38 H 0.43 -3.09 8.19 -92.71 -0.76 -3.85 16 39 H 0.11 -1.18 7.96 -2.39 -0.02 -1.19 16 40 H 0.41 -6.61 8.74 -74.06 -0.65 -7.26 16 41 H -0.30 -1.20 7.11 99.48 0.71 -0.50 16 42 H -0.29 -0.45 7.11 99.48 0.71 0.26 16 43 H 0.14 0.87 6.19 -2.91 -0.02 0.85 16 Total: 0.00 -23.30 377.28 -1.23 -24.54 By element: Atomic # 1 Polarization: -18.72 SS G_CDS: -1.01 Total: -19.73 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: 3.71 Total: 6.65 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -3.37 Total: -2.11 kcal Atomic # 8 Polarization: -4.67 SS G_CDS: -1.98 Total: -6.64 kcal Atomic # 14 Polarization: -3.91 SS G_CDS: 2.10 Total: -1.81 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.89 kcal Total: -23.30 -1.23 -24.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.323 kcal (2) G-P(sol) polarization free energy of solvation -23.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.536 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds