Wall clock time and date at job start Sat Mar 6 2021 11:14:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.34846 * 125.88594 * 244.68946 * 4 2 1 6 6 C 1.40893 * 107.41607 * 179.89041 * 5 4 2 7 7 C 1.34857 * 107.41316 * 0.37732 * 6 5 4 8 8 C 1.50705 * 125.88796 * 179.80395 * 7 6 5 9 9 C 1.50691 * 109.47264 * 274.96047 * 8 7 6 10 10 O 1.21286 * 120.00020 * 0.02562 * 9 8 7 11 11 N 1.34781 * 120.00119 * 180.02562 * 9 8 7 12 12 C 1.46493 * 120.00016 * 179.97438 * 11 9 8 13 13 H 1.08996 * 112.85378 * 336.19539 * 12 11 9 14 14 C 1.53786 * 113.61528 * 107.49913 * 12 11 9 15 15 C 1.53787 * 87.07988 * 89.11657 * 14 12 11 16 16 H 1.09003 * 113.61346 * 270.88519 * 15 14 12 17 17 C 1.50695 * 113.69121 * 139.99458 * 15 14 12 18 18 C 1.38236 * 119.98991 * 322.18978 * 17 15 14 19 19 C 1.38224 * 120.00913 * 179.73013 * 18 17 15 20 20 C 1.38321 * 119.98773 * 0.53960 * 19 18 17 21 21 Br 1.89101 * 120.00789 * 179.70716 * 20 19 18 22 22 C 1.38319 * 119.98327 * 359.73182 * 20 19 18 23 23 C 1.38224 * 119.98731 * 0.02562 * 22 20 19 24 24 C 1.53778 * 113.61261 * 204.99562 * 12 11 9 25 25 N 1.36337 * 125.89106 * 65.00204 * 4 2 1 26 26 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 27 27 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 28 28 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 29 29 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 30 30 H 1.07997 * 126.29543 * 0.02827 * 5 4 2 31 31 H 1.08000 * 126.29644 * 180.13107 * 6 5 4 32 32 H 1.09002 * 109.46853 * 34.96265 * 8 7 6 33 33 H 1.09006 * 109.46379 * 154.95876 * 8 7 6 34 34 H 0.96997 * 119.99532 * 359.97438 * 11 9 8 35 35 H 1.08994 * 113.61512 * 203.65921 * 14 12 11 36 36 H 1.09001 * 113.61254 * 334.57077 * 14 12 11 37 37 H 1.08002 * 119.99455 * 359.97438 * 18 17 15 38 38 H 1.08002 * 120.00356 * 180.29719 * 19 18 17 39 39 H 1.08001 * 120.00811 * 179.97438 * 22 20 19 40 40 H 1.08005 * 119.99138 * 180.02562 * 23 22 20 41 41 H 1.09000 * 113.61730 * 25.43258 * 24 12 11 42 42 H 1.09008 * 113.61672 * 156.25384 * 24 12 11 43 43 H 0.97004 * 125.63797 * 359.95755 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6350 -0.1499 2.2350 6 6 2.8982 -1.1605 3.1808 7 6 2.3524 -2.3020 2.7141 8 6 2.3924 -3.6443 3.3979 9 6 3.6789 -4.3474 3.0495 10 8 4.4843 -3.8110 2.3183 11 7 3.9346 -5.5723 3.5505 12 6 5.1850 -6.2559 3.2113 13 1 5.6183 -5.9059 2.2744 14 6 6.1905 -6.3135 4.3735 15 6 5.5183 -7.6337 4.7860 16 1 4.6790 -7.5017 5.4689 17 6 6.4895 -8.6886 5.2496 18 6 7.7150 -8.8224 4.6241 19 6 8.6083 -9.7862 5.0526 20 6 8.2714 -10.6242 6.1003 21 35 9.4899 -11.9483 6.6816 22 6 7.0429 -10.4937 6.7222 23 6 6.1522 -9.5263 6.2963 24 6 5.0973 -7.7877 3.3150 25 7 1.7575 -2.0319 1.5175 26 1 -0.3934 0.4418 0.7650 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7702 0.0322 29 1 1.5616 2.4678 -1.2086 30 1 2.9389 0.8842 2.3032 31 1 3.4410 -1.0435 4.1071 32 1 2.3358 -3.5040 4.4774 33 1 1.5472 -4.2469 3.0650 34 1 3.2906 -6.0010 4.1355 35 1 7.2247 -6.4324 4.0506 36 1 6.0627 -5.5124 5.1015 37 1 7.9760 -8.1712 3.8030 38 1 9.5677 -9.8874 4.5670 39 1 6.7792 -11.1480 7.5400 40 1 5.1930 -9.4241 6.7821 41 1 4.0870 -8.1768 3.1885 42 1 5.8318 -8.3097 2.7016 43 1 1.2880 -2.6738 0.9621 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:14:19 Heat of formation + Delta-G solvation = 33.093328 kcal Electronic energy + Delta-G solvation = -26174.077880 eV Core-core repulsion = 22233.398149 eV Total energy + Delta-G solvation = -3940.679732 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.33682 -41.53033 -40.29420 -38.82467 -37.67968 -34.71883 -33.34170 -32.68622 -32.04400 -31.91686 -30.41224 -29.28958 -26.70737 -26.05806 -25.05576 -23.89901 -22.57742 -22.05781 -21.34923 -21.00812 -20.13769 -18.91009 -18.43280 -17.74376 -17.26335 -16.76230 -16.41054 -16.35401 -16.24844 -16.08073 -15.34740 -15.27205 -15.05798 -14.75573 -14.54752 -14.50674 -14.37134 -14.16255 -14.06551 -13.83394 -13.71530 -13.45417 -13.33501 -12.93539 -12.70350 -12.41342 -12.11323 -12.05065 -11.99790 -11.86257 -11.41856 -11.29594 -11.22556 -11.00738 -10.63588 -10.09219 -10.01009 -9.78871 -9.51960 -8.95737 -4.96840 0.04449 0.31133 0.64509 1.11460 1.26532 1.60095 1.69523 1.86774 1.94939 2.28638 2.52072 2.55409 3.45458 3.51606 3.64490 3.66731 3.70834 3.80262 3.82376 3.94014 3.95565 4.04428 4.20132 4.22912 4.34857 4.38231 4.40951 4.49768 4.62418 4.65463 4.70422 4.76390 4.80762 4.85681 4.90397 5.01359 5.04615 5.14871 5.22578 5.24239 5.26521 5.30085 5.51462 5.65895 5.83086 6.00943 6.14347 6.52891 6.67438 6.71319 7.26805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.052 4.052 3 Si 0.809 3.191 4 C -0.023 4.023 5 C -0.201 4.201 6 C -0.200 4.200 7 C 0.032 3.968 8 C -0.066 4.066 9 C 0.513 3.487 10 O -0.579 6.579 11 N -0.699 5.699 12 C 0.115 3.885 13 H 0.078 0.922 14 C -0.143 4.143 15 C -0.064 4.064 16 H 0.121 0.879 17 C -0.057 4.057 18 C -0.116 4.116 19 C -0.100 4.100 20 C -0.110 4.110 21 Br -0.064 7.064 22 C -0.099 4.099 23 C -0.111 4.111 24 C -0.125 4.125 25 N -0.538 5.538 26 H 0.397 0.603 27 H 0.100 0.900 28 H -0.296 1.296 29 H -0.292 1.292 30 H 0.153 0.847 31 H 0.141 0.859 32 H 0.146 0.854 33 H 0.130 0.870 34 H 0.419 0.581 35 H 0.092 0.908 36 H 0.070 0.930 37 H 0.143 0.857 38 H 0.136 0.864 39 H 0.140 0.860 40 H 0.154 0.846 41 H 0.091 0.909 42 H 0.096 0.904 43 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.956 -1.075 4.544 7.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.162 4.162 3 Si 0.714 3.286 4 C -0.136 4.136 5 C -0.226 4.226 6 C -0.224 4.224 7 C -0.082 4.082 8 C -0.106 4.106 9 C 0.300 3.700 10 O -0.458 6.458 11 N -0.352 5.352 12 C 0.009 3.991 13 H 0.096 0.904 14 C -0.182 4.182 15 C -0.082 4.082 16 H 0.139 0.861 17 C -0.057 4.057 18 C -0.135 4.135 19 C -0.120 4.120 20 C -0.189 4.189 21 Br 0.022 6.978 22 C -0.119 4.119 23 C -0.129 4.129 24 C -0.163 4.163 25 N -0.133 5.133 26 H 0.248 0.752 27 H 0.117 0.883 28 H -0.223 1.223 29 H -0.220 1.220 30 H 0.170 0.830 31 H 0.159 0.841 32 H 0.164 0.836 33 H 0.148 0.852 34 H 0.257 0.743 35 H 0.110 0.890 36 H 0.089 0.911 37 H 0.161 0.839 38 H 0.154 0.846 39 H 0.157 0.843 40 H 0.172 0.828 41 H 0.109 0.891 42 H 0.114 0.886 43 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges -4.460 -1.033 3.184 5.576 hybrid contribution -0.027 -1.001 -0.411 1.082 sum -4.487 -2.034 2.773 5.653 Atomic orbital electron populations 1.86441 1.17158 1.82244 1.50708 1.24901 0.85168 1.11207 0.94896 0.93089 0.77274 0.74103 0.84176 1.20976 1.07633 0.84990 1.00042 1.20924 1.05473 1.00436 0.95772 1.20857 1.06634 0.92673 1.02270 1.19946 1.03064 0.96453 0.88723 1.20255 0.95711 0.90700 1.03948 1.21077 0.88572 0.81287 0.79076 1.90763 1.50229 1.66399 1.38383 1.45539 1.21136 1.17493 1.51040 1.21781 0.85569 0.93374 0.98344 0.90407 1.23551 0.99372 0.97172 0.98111 1.21647 0.97290 0.92228 0.97048 0.86114 1.20036 0.94726 0.96128 0.94854 1.21236 0.93513 0.98086 1.00634 1.21286 1.00666 0.94680 0.95379 1.21979 0.96291 0.98962 1.01717 1.96755 1.59594 1.51840 1.89652 1.21346 0.92001 0.98905 0.99631 1.21369 1.00299 0.94482 0.96790 1.23364 1.03765 0.93799 0.95353 1.41892 1.44265 1.09166 1.17974 0.75230 0.88284 1.22315 1.21964 0.82974 0.84084 0.83610 0.85237 0.74287 0.88956 0.91089 0.83921 0.84645 0.84260 0.82832 0.89055 0.88561 0.74440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.34 12.88 -148.98 -1.92 -2.26 16 2 C -0.05 -0.08 3.08 71.24 0.22 0.14 16 3 Si 0.81 -0.14 30.60 68.60 2.10 1.96 16 4 C -0.02 -0.08 6.50 41.08 0.27 0.19 16 5 C -0.20 -0.82 9.37 22.14 0.21 -0.62 16 6 C -0.20 -0.87 10.77 22.14 0.24 -0.63 16 7 C 0.03 0.06 5.66 41.08 0.23 0.29 16 8 C -0.07 0.40 6.24 29.10 0.18 0.58 16 9 C 0.51 0.04 7.82 87.65 0.69 0.72 16 10 O -0.58 -6.77 15.63 -3.05 -0.05 -6.82 16 11 N -0.70 4.33 5.26 -440.05 -2.32 2.01 16 12 C 0.12 -0.43 4.32 45.52 0.20 -0.23 16 13 H 0.08 0.18 7.46 -2.39 -0.02 0.16 16 14 C -0.14 0.66 7.26 31.12 0.23 0.88 16 15 C -0.06 0.50 3.85 -11.01 -0.04 0.46 16 16 H 0.12 -1.39 8.09 -2.39 -0.02 -1.41 16 17 C -0.06 0.22 5.29 -19.87 -0.11 0.12 16 18 C -0.12 0.24 8.60 22.27 0.19 0.44 16 19 C -0.10 -0.06 9.79 22.29 0.22 0.16 16 20 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 21 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 22 C -0.10 0.04 9.79 22.29 0.22 0.26 16 23 C -0.11 0.41 9.71 22.27 0.22 0.62 16 24 C -0.12 0.95 7.29 31.12 0.23 1.18 16 25 N -0.54 -1.16 6.07 -171.11 -1.04 -2.20 16 26 H 0.40 -2.89 8.70 -74.06 -0.64 -3.53 16 27 H 0.10 0.32 7.96 -2.39 -0.02 0.30 16 28 H -0.30 -1.95 7.11 99.48 0.71 -1.24 16 29 H -0.29 -1.69 7.11 99.48 0.71 -0.99 16 30 H 0.15 0.06 6.24 -2.91 -0.02 0.04 16 31 H 0.14 0.31 8.06 -2.91 -0.02 0.28 16 32 H 0.15 -1.69 8.14 -2.39 -0.02 -1.71 16 33 H 0.13 -1.53 8.14 -2.38 -0.02 -1.55 16 34 H 0.42 -5.59 8.70 -92.71 -0.81 -6.39 16 35 H 0.09 -0.36 6.33 -2.39 -0.02 -0.37 16 36 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 37 H 0.14 -0.70 6.68 -2.91 -0.02 -0.72 16 38 H 0.14 -0.12 8.06 -2.91 -0.02 -0.14 16 39 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 40 H 0.15 -1.34 8.05 -2.91 -0.02 -1.36 16 41 H 0.09 -0.89 8.14 -2.39 -0.02 -0.90 16 42 H 0.10 -0.64 7.72 -2.38 -0.02 -0.65 16 43 H 0.42 -0.51 8.96 -92.71 -0.83 -1.34 16 Total: 0.00 -24.32 381.57 -1.56 -25.88 By element: Atomic # 1 Polarization: -20.96 SS G_CDS: -1.17 Total: -22.13 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: 3.52 Total: 4.46 kcal Atomic # 7 Polarization: 3.17 SS G_CDS: -3.35 Total: -0.19 kcal Atomic # 8 Polarization: -7.11 SS G_CDS: -1.97 Total: -9.08 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: 2.10 Total: 1.96 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -24.32 -1.56 -25.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.976 kcal (2) G-P(sol) polarization free energy of solvation -24.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.883 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds