Wall clock time and date at job start Sat Mar 6 2021 11:14:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46857 * 2 1 4 4 C 1.50695 * 109.46872 * 240.00298 * 2 1 3 5 5 C 1.30888 * 118.38253 * 120.15845 * 4 2 1 6 6 N 1.38929 * 121.78417 * 180.55779 * 5 4 2 7 7 C 1.47022 * 118.88258 * 346.51954 * 6 5 4 8 8 C 1.53542 * 107.65933 * 43.66709 * 7 6 5 9 9 C 1.50215 * 118.54821 * 299.99522 * 4 2 1 10 10 C 1.50700 * 109.32677 * 39.66831 * 9 4 2 11 11 O 1.21279 * 120.00113 * 120.34886 * 10 9 4 12 12 N 1.34784 * 119.99961 * 300.34654 * 10 9 4 13 13 C 1.46494 * 119.99635 * 180.02562 * 12 10 9 14 14 H 1.08999 * 112.85608 * 25.33506 * 13 12 10 15 15 C 1.53785 * 113.61419 * 156.53238 * 13 12 10 16 16 C 1.53777 * 87.08273 * 89.11122 * 15 13 12 17 17 H 1.09000 * 113.62060 * 270.88659 * 16 15 13 18 18 C 1.50700 * 113.61179 * 140.06265 * 16 15 13 19 19 C 1.38239 * 119.99624 * 299.73154 * 18 16 15 20 20 C 1.38219 * 120.01109 * 179.72505 * 19 18 16 21 21 C 1.38317 * 119.98974 * 0.54646 * 20 19 18 22 22 Br 1.89100 * 120.00967 * 179.70411 * 21 20 19 23 23 C 1.38332 * 119.98125 * 359.72989 * 21 20 19 24 24 C 1.38215 * 119.98795 * 359.97438 * 23 21 20 25 25 C 1.53784 * 113.61384 * 254.13439 * 13 12 10 26 26 H 0.96699 * 113.99936 * 299.99737 * 1 2 3 27 27 H 1.09003 * 109.47074 * 120.00021 * 2 1 3 28 28 H 1.48500 * 110.00005 * 300.00317 * 3 2 1 29 29 H 1.48498 * 110.00063 * 61.32073 * 3 2 1 30 30 H 1.07999 * 119.13789 * 0.39639 * 5 4 2 31 31 H 0.96995 * 120.55534 * 166.49786 * 6 5 4 32 32 H 1.09002 * 109.82726 * 284.12373 * 7 6 5 33 33 H 1.09009 * 109.87488 * 163.23330 * 7 6 5 34 34 H 1.09010 * 109.62383 * 179.32621 * 8 7 6 35 35 H 1.08996 * 109.62586 * 58.76971 * 8 7 6 36 36 H 1.08996 * 109.32736 * 280.01652 * 9 4 2 37 37 H 0.96995 * 120.00015 * 359.72695 * 12 10 9 38 38 H 1.08998 * 113.61514 * 203.66201 * 15 13 12 39 39 H 1.09006 * 113.60982 * 334.48103 * 15 13 12 40 40 H 1.07998 * 119.99055 * 359.97438 * 19 18 16 41 41 H 1.08003 * 120.00332 * 180.24680 * 20 19 18 42 42 H 1.07998 * 120.00141 * 180.02562 * 23 21 20 43 43 H 1.07998 * 119.99521 * 180.02562 * 24 23 21 44 44 H 1.09002 * 113.61479 * 25.43627 * 25 13 12 45 45 H 1.09002 * 113.61836 * 156.33796 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.6841 -0.0449 -2.0693 6 7 3.1760 -0.6266 -3.2311 7 6 3.0998 -2.0872 -3.3813 8 6 1.7084 -2.5321 -2.9085 9 6 1.5486 -2.1483 -1.4357 10 6 0.1132 -2.3465 -1.0215 11 8 -0.7003 -2.7478 -1.8264 12 7 -0.2664 -2.0777 0.2435 13 6 -1.6616 -2.2708 0.6462 14 1 -2.1800 -3.0100 0.0356 15 6 -1.8423 -2.4850 2.1583 16 6 -1.9627 -0.9569 2.2808 17 1 -1.0069 -0.4539 2.4280 18 6 -3.0158 -0.5111 3.2622 19 6 -4.3370 -0.8685 3.0681 20 6 -5.3024 -0.4646 3.9711 21 6 -4.9480 0.3068 5.0631 22 35 -6.2695 0.8668 6.2943 23 6 -3.6267 0.6691 5.2540 24 6 -2.6611 0.2596 4.3538 25 6 -2.4412 -0.9563 0.8165 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5613 2.4679 -1.2085 29 1 1.5878 2.4585 1.2242 30 1 2.9276 0.9850 -1.8542 31 1 3.5628 -0.0783 -3.9315 32 1 3.8673 -2.5622 -2.7701 33 1 3.2394 -2.3599 -4.4274 34 1 1.6128 -3.6125 -3.0177 35 1 0.9429 -2.0324 -3.5021 36 1 2.1910 -2.7832 -0.8257 37 1 0.3851 -1.7605 0.8883 38 1 -2.7575 -3.0173 2.4176 39 1 -0.9601 -2.8956 2.6496 40 1 -4.6143 -1.4668 2.2128 41 1 -6.3339 -0.7473 3.8214 42 1 -3.3496 1.2711 6.1067 43 1 -1.6295 0.5420 4.5029 44 1 -2.0419 -0.1320 0.2255 45 1 -3.5199 -1.0713 0.7097 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:14:29 Heat of formation + Delta-G solvation = 42.665102 kcal Electronic energy + Delta-G solvation = -29127.215219 eV Core-core repulsion = 25159.639072 eV Total energy + Delta-G solvation = -3967.576147 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.073 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.90977 -40.85588 -39.48574 -38.54160 -37.72747 -34.39789 -33.58510 -32.88709 -32.71803 -32.09875 -30.31641 -27.49041 -26.80374 -26.26022 -25.34631 -23.93280 -23.17442 -22.45019 -21.78254 -20.13594 -19.33973 -18.83844 -18.54155 -18.20178 -17.56132 -16.84223 -16.70406 -16.34472 -16.17869 -15.70507 -15.40224 -15.29707 -15.14264 -14.86387 -14.65418 -14.54025 -14.46308 -14.25409 -13.93857 -13.62902 -13.50436 -13.31525 -13.21775 -13.04353 -12.77240 -12.46792 -12.32614 -11.98775 -11.94170 -11.80547 -11.70031 -11.41177 -11.30364 -11.23741 -11.21991 -10.61259 -10.42911 -10.07552 -9.55703 -9.39884 -8.50734 -4.99069 0.01531 0.25852 0.67165 1.15805 1.34792 1.54729 1.92560 2.06007 2.38261 2.50766 2.52998 3.30639 3.41690 3.55675 3.66462 3.69964 3.75386 3.78357 3.86110 3.93375 4.01737 4.04679 4.14172 4.23848 4.26176 4.34261 4.37599 4.40662 4.57299 4.59823 4.63050 4.69679 4.72096 4.79258 4.85298 4.88356 4.95081 5.12560 5.14046 5.18438 5.20164 5.21300 5.34487 5.40295 5.49463 5.74877 5.82209 6.23962 6.37844 6.76252 6.79657 7.58723 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.062 4.062 3 Si 0.655 3.345 4 C -0.236 4.236 5 C 0.158 3.842 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.120 4.120 9 C -0.040 4.040 10 C 0.541 3.459 11 O -0.549 6.549 12 N -0.680 5.680 13 C 0.127 3.873 14 H 0.100 0.900 15 C -0.135 4.135 16 C -0.078 4.078 17 H 0.094 0.906 18 C -0.054 4.054 19 C -0.110 4.110 20 C -0.087 4.087 21 C -0.095 4.095 22 Br -0.051 7.051 23 C -0.088 4.088 24 C -0.112 4.112 25 C -0.145 4.145 26 H 0.363 0.637 27 H 0.065 0.935 28 H -0.258 1.258 29 H -0.264 1.264 30 H 0.133 0.867 31 H 0.404 0.596 32 H 0.063 0.937 33 H 0.083 0.917 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.094 0.906 37 H 0.398 0.602 38 H 0.097 0.903 39 H 0.075 0.925 40 H 0.133 0.867 41 H 0.133 0.867 42 H 0.132 0.868 43 H 0.130 0.870 44 H 0.088 0.912 45 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.901 -0.048 0.910 6.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.173 4.173 3 Si 0.557 3.443 4 C -0.247 4.247 5 C 0.036 3.964 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.159 4.159 9 C -0.061 4.061 10 C 0.328 3.672 11 O -0.427 6.427 12 N -0.333 5.333 13 C 0.021 3.979 14 H 0.118 0.882 15 C -0.174 4.174 16 C -0.097 4.097 17 H 0.113 0.887 18 C -0.055 4.055 19 C -0.129 4.129 20 C -0.107 4.107 21 C -0.174 4.174 22 Br 0.034 6.966 23 C -0.108 4.108 24 C -0.131 4.131 25 C -0.183 4.183 26 H 0.213 0.787 27 H 0.083 0.917 28 H -0.183 1.183 29 H -0.190 1.190 30 H 0.150 0.850 31 H 0.238 0.762 32 H 0.082 0.918 33 H 0.101 0.899 34 H 0.099 0.901 35 H 0.098 0.902 36 H 0.112 0.888 37 H 0.236 0.764 38 H 0.115 0.885 39 H 0.094 0.906 40 H 0.151 0.849 41 H 0.151 0.849 42 H 0.150 0.850 43 H 0.148 0.852 44 H 0.106 0.894 45 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 5.702 0.261 0.257 5.713 hybrid contribution -0.476 0.380 0.549 0.820 sum 5.225 0.641 0.806 5.326 Atomic orbital electron populations 1.87223 1.17653 1.77585 1.50331 1.24500 0.84927 1.09610 0.98278 0.95577 0.92833 0.75638 0.80229 1.19462 1.08380 0.95970 1.00840 1.20234 0.93304 0.96160 0.86691 1.44561 1.67714 1.06868 1.18577 1.21664 0.96735 0.80477 1.01651 1.21718 0.97450 1.02132 0.94574 1.19690 0.93642 0.94651 0.98105 1.20183 0.89956 0.75458 0.81638 1.90681 1.54157 1.46625 1.51232 1.45709 1.09287 1.66409 1.11917 1.21666 0.83510 0.97729 0.95040 0.88231 1.23421 1.03376 0.94851 0.95703 1.21712 0.96940 0.96912 0.94089 0.88741 1.19859 0.94300 0.96158 0.95152 1.21052 0.92155 1.00385 0.99319 1.21149 1.00428 0.96297 0.92820 1.21851 0.93834 1.04263 0.97498 1.96778 1.52152 1.89718 1.57915 1.21140 0.91060 0.99009 0.99584 1.21075 0.99477 0.98327 0.94255 1.23753 1.00822 0.99610 0.94150 0.78711 0.91716 1.18334 1.18968 0.85038 0.76152 0.91840 0.89887 0.90145 0.90181 0.88824 0.76420 0.88501 0.90585 0.84908 0.84912 0.84978 0.85242 0.89350 0.89154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.37 6.12 -35.23 -0.22 0.16 16 2 C -0.06 0.13 1.82 36.00 0.07 0.19 16 3 Si 0.66 -1.20 29.66 -169.99 -5.04 -6.24 16 4 C -0.24 0.13 5.28 -101.27 -0.54 -0.40 16 5 C 0.16 -0.18 9.61 -16.02 -0.15 -0.34 16 6 N -0.75 1.39 5.83 -60.74 -0.35 1.04 16 7 C 0.12 -0.23 7.16 -3.48 -0.02 -0.26 16 8 C -0.12 -0.06 4.91 -26.43 -0.13 -0.19 16 9 C -0.04 -0.01 2.75 -93.14 -0.26 -0.27 16 10 C 0.54 1.46 6.30 -10.98 -0.07 1.39 16 11 O -0.55 -3.86 15.42 5.56 0.09 -3.78 16 12 N -0.68 0.20 2.89 -53.02 -0.15 0.05 16 13 C 0.13 -0.04 4.29 -67.12 -0.29 -0.33 16 14 H 0.10 0.19 7.50 -51.93 -0.39 -0.20 16 15 C -0.14 0.30 7.29 -25.92 -0.19 0.12 16 16 C -0.08 0.20 3.55 -90.82 -0.32 -0.12 16 17 H 0.09 -0.37 6.89 -51.93 -0.36 -0.73 16 18 C -0.05 0.05 5.29 -104.62 -0.55 -0.50 16 19 C -0.11 0.05 8.63 -39.59 -0.34 -0.29 16 20 C -0.09 -0.05 9.79 -39.56 -0.39 -0.43 16 21 C -0.10 -0.12 6.22 -39.52 -0.25 -0.36 16 22 Br -0.05 -0.08 33.70 -68.01 -2.29 -2.38 16 23 C -0.09 -0.03 9.79 -39.56 -0.39 -0.42 16 24 C -0.11 0.08 9.71 -39.59 -0.38 -0.30 16 25 C -0.15 0.15 6.60 -25.77 -0.17 -0.02 16 26 H 0.36 -1.03 5.75 45.56 0.26 -0.77 16 27 H 0.07 -0.28 7.07 -51.93 -0.37 -0.65 16 28 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 29 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 30 H 0.13 -0.35 4.34 -52.49 -0.23 -0.58 16 31 H 0.40 -1.45 8.96 -40.82 -0.37 -1.82 16 32 H 0.06 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 34 H 0.08 0.03 8.14 -51.92 -0.42 -0.39 16 35 H 0.08 0.27 7.76 -51.93 -0.40 -0.14 16 36 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.40 -0.97 5.78 -40.82 -0.24 -1.21 16 38 H 0.10 -0.21 7.73 -51.93 -0.40 -0.61 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 40 H 0.13 -0.24 6.65 -52.49 -0.35 -0.59 16 41 H 0.13 -0.06 8.06 -52.48 -0.42 -0.49 16 42 H 0.13 -0.09 8.06 -52.49 -0.42 -0.52 16 43 H 0.13 -0.35 8.05 -52.49 -0.42 -0.77 16 44 H 0.09 0.01 5.52 -51.93 -0.29 -0.28 16 45 H 0.09 -0.09 6.31 -51.93 -0.33 -0.42 16 LS Contribution 361.98 15.07 5.45 5.45 Total: 0.00 -7.77 361.98 -12.92 -20.69 By element: Atomic # 1 Polarization: -6.42 SS G_CDS: -6.03 Total: -12.45 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -4.37 Total: -2.54 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -0.51 Total: 1.09 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.13 Total: -3.62 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.04 Total: -6.24 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.29 Total: -2.38 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -7.77 -12.92 -20.69 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.358 kcal (2) G-P(sol) polarization free energy of solvation -7.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.693 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds