Wall clock time and date at job start Sat Mar 6 2021 11:14:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46857 * 2 1 4 4 C 1.50695 * 109.46872 * 240.00298 * 2 1 3 5 5 C 1.30888 * 118.38253 * 120.15845 * 4 2 1 6 6 N 1.38929 * 121.78417 * 180.55779 * 5 4 2 7 7 C 1.47022 * 118.88258 * 346.51954 * 6 5 4 8 8 C 1.53542 * 107.65933 * 43.66709 * 7 6 5 9 9 C 1.50215 * 118.54821 * 299.99522 * 4 2 1 10 10 C 1.50700 * 109.32677 * 39.66831 * 9 4 2 11 11 O 1.21279 * 120.00113 * 120.34886 * 10 9 4 12 12 N 1.34784 * 119.99961 * 300.34654 * 10 9 4 13 13 C 1.46494 * 119.99635 * 180.02562 * 12 10 9 14 14 H 1.08999 * 112.85608 * 25.33506 * 13 12 10 15 15 C 1.53785 * 113.61419 * 156.53238 * 13 12 10 16 16 C 1.53777 * 87.08273 * 89.11122 * 15 13 12 17 17 H 1.09000 * 113.62060 * 270.88659 * 16 15 13 18 18 C 1.50700 * 113.61179 * 140.06265 * 16 15 13 19 19 C 1.38239 * 119.99624 * 299.73154 * 18 16 15 20 20 C 1.38219 * 120.01109 * 179.72505 * 19 18 16 21 21 C 1.38317 * 119.98974 * 0.54646 * 20 19 18 22 22 Br 1.89100 * 120.00967 * 179.70411 * 21 20 19 23 23 C 1.38332 * 119.98125 * 359.72989 * 21 20 19 24 24 C 1.38215 * 119.98795 * 359.97438 * 23 21 20 25 25 C 1.53784 * 113.61384 * 254.13439 * 13 12 10 26 26 H 0.96699 * 113.99936 * 299.99737 * 1 2 3 27 27 H 1.09003 * 109.47074 * 120.00021 * 2 1 3 28 28 H 1.48500 * 110.00005 * 300.00317 * 3 2 1 29 29 H 1.48498 * 110.00063 * 61.32073 * 3 2 1 30 30 H 1.07999 * 119.13789 * 0.39639 * 5 4 2 31 31 H 0.96995 * 120.55534 * 166.49786 * 6 5 4 32 32 H 1.09002 * 109.82726 * 284.12373 * 7 6 5 33 33 H 1.09009 * 109.87488 * 163.23330 * 7 6 5 34 34 H 1.09010 * 109.62383 * 179.32621 * 8 7 6 35 35 H 1.08996 * 109.62586 * 58.76971 * 8 7 6 36 36 H 1.08996 * 109.32736 * 280.01652 * 9 4 2 37 37 H 0.96995 * 120.00015 * 359.72695 * 12 10 9 38 38 H 1.08998 * 113.61514 * 203.66201 * 15 13 12 39 39 H 1.09006 * 113.60982 * 334.48103 * 15 13 12 40 40 H 1.07998 * 119.99055 * 359.97438 * 19 18 16 41 41 H 1.08003 * 120.00332 * 180.24680 * 20 19 18 42 42 H 1.07998 * 120.00141 * 180.02562 * 23 21 20 43 43 H 1.07998 * 119.99521 * 180.02562 * 24 23 21 44 44 H 1.09002 * 113.61479 * 25.43627 * 25 13 12 45 45 H 1.09002 * 113.61836 * 156.33796 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.6841 -0.0449 -2.0693 6 7 3.1760 -0.6266 -3.2311 7 6 3.0998 -2.0872 -3.3813 8 6 1.7084 -2.5321 -2.9085 9 6 1.5486 -2.1483 -1.4357 10 6 0.1132 -2.3465 -1.0215 11 8 -0.7003 -2.7478 -1.8264 12 7 -0.2664 -2.0777 0.2435 13 6 -1.6616 -2.2708 0.6462 14 1 -2.1800 -3.0100 0.0356 15 6 -1.8423 -2.4850 2.1583 16 6 -1.9627 -0.9569 2.2808 17 1 -1.0069 -0.4539 2.4280 18 6 -3.0158 -0.5111 3.2622 19 6 -4.3370 -0.8685 3.0681 20 6 -5.3024 -0.4646 3.9711 21 6 -4.9480 0.3068 5.0631 22 35 -6.2695 0.8668 6.2943 23 6 -3.6267 0.6691 5.2540 24 6 -2.6611 0.2596 4.3538 25 6 -2.4412 -0.9563 0.8165 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5613 2.4679 -1.2085 29 1 1.5878 2.4585 1.2242 30 1 2.9276 0.9850 -1.8542 31 1 3.5628 -0.0783 -3.9315 32 1 3.8673 -2.5622 -2.7701 33 1 3.2394 -2.3599 -4.4274 34 1 1.6128 -3.6125 -3.0177 35 1 0.9429 -2.0324 -3.5021 36 1 2.1910 -2.7832 -0.8257 37 1 0.3851 -1.7605 0.8883 38 1 -2.7575 -3.0173 2.4176 39 1 -0.9601 -2.8956 2.6496 40 1 -4.6143 -1.4668 2.2128 41 1 -6.3339 -0.7473 3.8214 42 1 -3.3496 1.2711 6.1067 43 1 -1.6295 0.5420 4.5029 44 1 -2.0419 -0.1320 0.2255 45 1 -3.5199 -1.0713 0.7097 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:14:28 Heat of formation + Delta-G solvation = 46.912633 kcal Electronic energy + Delta-G solvation = -29127.031032 eV Core-core repulsion = 25159.639072 eV Total energy + Delta-G solvation = -3967.391960 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.073 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.90418 -40.81656 -39.43049 -38.63497 -37.62900 -34.47521 -33.54186 -32.82665 -32.69990 -32.04896 -30.32261 -27.41561 -26.70673 -26.16958 -25.27134 -23.87835 -23.09692 -22.41399 -21.85141 -20.09052 -19.26719 -18.74064 -18.45053 -18.17161 -17.58276 -16.79737 -16.63963 -16.33995 -16.11649 -15.74396 -15.34908 -15.26907 -15.10050 -14.76558 -14.58300 -14.49397 -14.43233 -14.22963 -13.88955 -13.61478 -13.42022 -13.33676 -13.15691 -13.00518 -12.76732 -12.40631 -12.29635 -11.97953 -11.86817 -11.82597 -11.67049 -11.38109 -11.30377 -11.20417 -11.16621 -10.68572 -10.44556 -10.03223 -9.55048 -9.42673 -8.37819 -4.85370 0.03922 0.30386 0.63576 1.26723 1.47267 1.63909 1.89600 2.05722 2.38467 2.55005 2.69834 3.45806 3.51413 3.66223 3.71568 3.80094 3.83215 3.89425 3.93374 4.01965 4.07671 4.20087 4.27372 4.29893 4.34445 4.41219 4.43093 4.57330 4.67848 4.69866 4.72966 4.80407 4.84208 4.86528 4.92323 4.97260 5.05757 5.16637 5.19402 5.23962 5.26006 5.27723 5.33181 5.50170 5.56619 5.79927 5.83209 6.36941 6.60252 6.77888 6.98219 7.50022 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.065 4.065 3 Si 0.732 3.268 4 C -0.251 4.251 5 C 0.154 3.846 6 N -0.748 5.748 7 C 0.123 3.877 8 C -0.120 4.120 9 C -0.038 4.038 10 C 0.532 3.468 11 O -0.604 6.604 12 N -0.662 5.662 13 C 0.119 3.881 14 H 0.071 0.929 15 C -0.123 4.123 16 C -0.063 4.063 17 H 0.119 0.881 18 C -0.054 4.054 19 C -0.116 4.116 20 C -0.100 4.100 21 C -0.110 4.110 22 Br -0.064 7.064 23 C -0.099 4.099 24 C -0.112 4.112 25 C -0.144 4.144 26 H 0.372 0.628 27 H 0.100 0.900 28 H -0.315 1.315 29 H -0.293 1.293 30 H 0.144 0.856 31 H 0.412 0.588 32 H 0.079 0.921 33 H 0.094 0.906 34 H 0.076 0.924 35 H 0.044 0.956 36 H 0.116 0.884 37 H 0.412 0.588 38 H 0.096 0.904 39 H 0.089 0.911 40 H 0.142 0.858 41 H 0.135 0.865 42 H 0.139 0.861 43 H 0.154 0.846 44 H 0.079 0.921 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.037 -0.064 1.997 9.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.176 4.176 3 Si 0.640 3.360 4 C -0.261 4.261 5 C 0.032 3.968 6 N -0.379 5.379 7 C -0.001 4.001 8 C -0.159 4.159 9 C -0.059 4.059 10 C 0.321 3.679 11 O -0.486 6.486 12 N -0.315 5.315 13 C 0.013 3.987 14 H 0.089 0.911 15 C -0.161 4.161 16 C -0.081 4.081 17 H 0.137 0.863 18 C -0.055 4.055 19 C -0.134 4.134 20 C -0.120 4.120 21 C -0.190 4.190 22 Br 0.022 6.978 23 C -0.119 4.119 24 C -0.130 4.130 25 C -0.182 4.182 26 H 0.224 0.776 27 H 0.118 0.882 28 H -0.244 1.244 29 H -0.220 1.220 30 H 0.161 0.839 31 H 0.248 0.752 32 H 0.097 0.903 33 H 0.113 0.887 34 H 0.095 0.905 35 H 0.063 0.937 36 H 0.134 0.866 37 H 0.252 0.748 38 H 0.114 0.886 39 H 0.108 0.892 40 H 0.159 0.841 41 H 0.153 0.847 42 H 0.157 0.843 43 H 0.172 0.828 44 H 0.097 0.903 45 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 7.871 0.247 1.390 7.997 hybrid contribution -1.194 0.424 0.141 1.275 sum 6.677 0.671 1.531 6.883 Atomic orbital electron populations 1.87213 1.18552 1.77829 1.51224 1.24627 0.84262 1.09548 0.99150 0.94824 0.91586 0.73983 0.75589 1.19558 1.09017 0.95662 1.01880 1.20465 0.93146 0.96598 0.86632 1.44648 1.67440 1.07112 1.18657 1.21689 0.95321 0.80470 1.02623 1.21666 0.97992 1.01576 0.94668 1.19722 0.92300 0.95822 0.98030 1.20701 0.90648 0.74710 0.81887 1.90654 1.55763 1.49317 1.52853 1.45576 1.09550 1.65077 1.11296 1.21672 0.83431 0.97584 0.96023 0.91120 1.23347 1.03963 0.95115 0.93703 1.21689 0.97388 0.96798 0.92274 0.86348 1.20021 0.94319 0.95800 0.95339 1.21231 0.92471 1.00371 0.99349 1.21279 1.00961 0.96667 0.93082 1.21973 0.94101 1.05145 0.97736 1.96752 1.52829 1.89871 1.58388 1.21340 0.90939 0.99315 1.00276 1.21362 1.00415 0.97609 0.93648 1.23699 1.00509 0.98701 0.95301 0.77592 0.88220 1.24408 1.22042 0.83945 0.75212 0.90299 0.88735 0.90514 0.93716 0.86624 0.74798 0.88591 0.89195 0.84058 0.84701 0.84277 0.82824 0.90308 0.89572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.19 6.12 -148.98 -0.91 0.28 16 2 C -0.07 0.37 1.82 71.23 0.13 0.50 16 3 Si 0.73 -3.20 29.66 68.60 2.03 -1.17 16 4 C -0.25 0.49 5.28 -16.53 -0.09 0.40 16 5 C 0.15 -0.46 9.61 83.64 0.80 0.35 16 6 N -0.75 3.20 5.83 -346.07 -2.02 1.18 16 7 C 0.12 -0.55 7.16 86.46 0.62 0.07 16 8 C -0.12 -0.23 4.91 30.79 0.15 -0.08 16 9 C -0.04 -0.01 2.75 -12.43 -0.03 -0.05 16 10 C 0.53 3.27 6.30 87.66 0.55 3.82 16 11 O -0.60 -9.96 15.42 -3.03 -0.05 -10.01 16 12 N -0.66 0.67 2.89 -440.03 -1.27 -0.60 16 13 C 0.12 -0.05 4.29 45.52 0.20 0.15 16 14 H 0.07 0.42 7.50 -2.39 -0.02 0.40 16 15 C -0.12 0.71 7.29 31.12 0.23 0.93 16 16 C -0.06 0.42 3.55 -10.92 -0.04 0.38 16 17 H 0.12 -1.32 6.89 -2.39 -0.02 -1.33 16 18 C -0.05 0.17 5.29 -19.86 -0.11 0.07 16 19 C -0.12 0.12 8.63 22.27 0.19 0.31 16 20 C -0.10 -0.15 9.79 22.28 0.22 0.07 16 21 C -0.11 -0.31 6.22 22.31 0.14 -0.17 16 22 Br -0.06 -0.25 33.70 -20.37 -0.69 -0.94 16 23 C -0.10 -0.02 9.79 22.29 0.22 0.20 16 24 C -0.11 0.35 9.71 22.27 0.22 0.56 16 25 C -0.14 0.30 6.60 31.21 0.21 0.50 16 26 H 0.37 -2.69 5.75 -74.06 -0.43 -3.11 16 27 H 0.10 -1.22 7.07 -2.39 -0.02 -1.24 16 28 H -0.32 -1.62 7.11 99.48 0.71 -0.92 16 29 H -0.29 -0.12 7.11 99.48 0.71 0.59 16 30 H 0.14 -0.85 4.34 -2.91 -0.01 -0.86 16 31 H 0.41 -3.19 8.96 -92.71 -0.83 -4.02 16 32 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 33 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 34 H 0.08 0.16 8.14 -2.38 -0.02 0.14 16 35 H 0.04 0.41 7.76 -2.39 -0.02 0.39 16 36 H 0.12 -0.50 8.14 -2.39 -0.02 -0.52 16 37 H 0.41 -2.84 5.78 -92.71 -0.54 -3.38 16 38 H 0.10 -0.48 7.73 -2.39 -0.02 -0.50 16 39 H 0.09 -0.71 8.14 -2.38 -0.02 -0.72 16 40 H 0.14 -0.48 6.65 -2.91 -0.02 -0.50 16 41 H 0.14 0.01 8.06 -2.91 -0.02 -0.01 16 42 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 43 H 0.15 -1.28 8.05 -2.91 -0.02 -1.30 16 44 H 0.08 0.03 5.52 -2.39 -0.01 0.02 16 45 H 0.09 -0.11 6.31 -2.39 -0.02 -0.12 16 Total: 0.00 -21.79 361.98 0.01 -21.78 By element: Atomic # 1 Polarization: -17.84 SS G_CDS: -0.69 Total: -18.53 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 3.60 Total: 8.02 kcal Atomic # 7 Polarization: 3.87 SS G_CDS: -3.29 Total: 0.58 kcal Atomic # 8 Polarization: -8.78 SS G_CDS: -0.96 Total: -9.73 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.03 Total: -1.17 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -0.69 Total: -0.94 kcal Total: -21.79 0.01 -21.78 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.691 kcal (2) G-P(sol) polarization free energy of solvation -21.786 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.779 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds