Wall clock time and date at job start Sat Mar 6 2021 11:15:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86300 * 109.47207 * 2 1 4 4 C 1.50697 * 109.47295 * 240.00288 * 2 1 3 5 5 C 1.38246 * 119.97772 * 120.02198 * 4 2 1 6 6 C 1.38283 * 120.11526 * 179.97438 * 5 4 2 7 7 C 1.38129 * 120.05552 * 359.68422 * 6 5 4 8 8 C 1.38753 * 119.94157 * 0.58743 * 7 6 5 9 9 O 1.35893 * 120.05357 * 179.69975 * 8 7 6 10 10 C 1.42902 * 117.00251 * 359.73556 * 9 8 7 11 11 C 1.53001 * 109.47352 * 179.97438 * 10 9 8 12 12 C 1.52998 * 109.47276 * 179.97438 * 11 10 9 13 13 C 1.50699 * 109.46968 * 180.02562 * 12 11 10 14 14 O 1.21273 * 120.00190 * 0.02562 * 13 12 11 15 15 N 1.34782 * 119.99586 * 180.02562 * 13 12 11 16 16 C 1.46495 * 119.99734 * 179.97438 * 15 13 12 17 17 H 1.09008 * 112.85102 * 23.80316 * 16 15 13 18 18 C 1.53779 * 113.61551 * 154.99521 * 16 15 13 19 19 C 1.53785 * 87.08082 * 89.19995 * 18 16 15 20 20 H 1.08998 * 113.61819 * 270.80540 * 19 18 16 21 21 C 1.50696 * 113.61677 * 139.97871 * 19 18 16 22 22 C 1.38251 * 119.98958 * 121.52989 * 21 19 18 23 23 C 1.38215 * 120.01007 * 180.02562 * 22 21 19 24 24 C 1.38330 * 119.99171 * 0.02562 * 23 22 21 25 25 Br 1.89100 * 120.00875 * 179.97438 * 24 23 22 26 26 C 1.38320 * 119.97711 * 0.24881 * 24 23 22 27 27 C 1.38218 * 119.99423 * 359.49721 * 26 24 23 28 28 C 1.53785 * 87.16905 * 25.39336 * 19 18 16 29 29 C 1.38171 * 119.97384 * 299.99820 * 4 2 1 30 30 H 0.96705 * 114.00168 * 59.99947 * 1 2 3 31 31 H 1.09001 * 109.47374 * 119.99860 * 2 1 3 32 32 H 1.48503 * 109.99677 * 60.00130 * 3 2 1 33 33 H 1.48497 * 110.00393 * 181.31695 * 3 2 1 34 34 H 1.08002 * 119.93600 * 359.97438 * 5 4 2 35 35 H 1.07999 * 119.96958 * 179.97438 * 6 5 4 36 36 H 1.08000 * 120.02687 * 180.31963 * 7 6 5 37 37 H 1.08996 * 109.47339 * 59.99190 * 10 9 8 38 38 H 1.09003 * 109.46960 * 299.99400 * 10 9 8 39 39 H 1.09004 * 109.46588 * 59.99792 * 11 10 9 40 40 H 1.08994 * 109.47229 * 300.00004 * 11 10 9 41 41 H 1.08996 * 109.47048 * 59.99922 * 12 11 10 42 42 H 1.09005 * 109.46858 * 300.00303 * 12 11 10 43 43 H 0.96997 * 119.99914 * 359.97438 * 15 13 12 44 44 H 1.08995 * 113.61643 * 334.65649 * 18 16 15 45 45 H 1.09004 * 113.69738 * 203.75624 * 18 16 15 46 46 H 1.08004 * 119.98973 * 0.02562 * 22 21 19 47 47 H 1.07998 * 120.00646 * 179.97438 * 23 22 21 48 48 H 1.08005 * 120.00538 * 179.74526 * 26 24 23 49 49 H 1.07996 * 120.00188 * 180.25485 * 27 26 24 50 50 H 1.09003 * 113.61484 * 89.16033 * 28 19 18 51 51 H 1.09003 * 113.60975 * 220.06435 * 28 19 18 52 52 H 1.08004 * 120.02283 * 0.04254 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7265 -0.0381 -2.1399 6 6 3.1894 -0.6873 -3.2697 7 6 2.8637 -2.0116 -3.4889 8 6 2.0611 -2.6869 -2.5806 9 8 1.7342 -3.9880 -2.7972 10 6 2.2469 -4.5969 -3.9840 11 6 1.7772 -6.0513 -4.0549 12 6 2.3257 -6.7031 -5.3258 13 6 1.8625 -8.1354 -5.3959 14 8 1.1623 -8.5900 -4.5162 15 7 2.2264 -8.9111 -6.4362 16 6 1.7767 -10.3037 -6.5041 17 1 0.8662 -10.4828 -5.9320 18 6 1.7258 -10.8656 -7.9346 19 6 3.1890 -11.2943 -7.7341 20 1 3.9112 -10.5300 -8.0210 21 6 3.5067 -12.6476 -8.3159 22 6 4.4953 -12.7730 -9.2742 23 6 4.7867 -14.0139 -9.8086 24 6 4.0887 -15.1305 -9.3848 25 35 4.4866 -16.8284 -10.1160 26 6 3.0959 -15.0037 -8.4301 27 6 2.8087 -13.7632 -7.8924 28 6 2.8929 -11.3266 -6.2254 29 6 1.5972 -2.0332 -1.4486 30 1 -0.3934 0.4417 -0.7651 31 1 1.7923 -0.5138 0.8900 32 1 1.5614 2.4678 1.2086 33 1 3.5345 1.7703 -0.0321 34 1 2.9864 0.9959 -1.9676 35 1 3.8101 -0.1598 -3.9788 36 1 3.2298 -2.5196 -4.3689 37 1 3.3363 -4.5677 -3.9658 38 1 1.8835 -4.0545 -4.8568 39 1 0.6877 -6.0807 -4.0729 40 1 2.1409 -6.5935 -3.1821 41 1 3.4151 -6.6735 -5.3082 42 1 1.9616 -6.1606 -6.1984 43 1 2.7862 -8.5474 -7.1400 44 1 1.5961 -10.1005 -8.7000 45 1 1.0377 -11.7028 -8.0522 46 1 5.0399 -11.9010 -9.6053 47 1 5.5587 -14.1117 -10.5575 48 1 2.5478 -15.8746 -8.1019 49 1 2.0363 -13.6647 -7.1441 50 1 2.5243 -12.2901 -5.8733 51 1 3.7040 -10.9330 -5.6128 52 1 0.9757 -2.5579 -0.7380 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:15:00 Heat of formation + Delta-G solvation = -27.701410 kcal Electronic energy + Delta-G solvation = -32301.269808 eV Core-core repulsion = 27665.396159 eV Total energy + Delta-G solvation = -4635.873649 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.093 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.62722 -41.25470 -40.44724 -39.22097 -38.84677 -37.29159 -34.90549 -34.65560 -33.00328 -32.43665 -32.04721 -31.24120 -30.37853 -28.38287 -26.85052 -26.70479 -25.78813 -24.03034 -23.70315 -23.48061 -22.36727 -21.88378 -21.44992 -20.12309 -19.18909 -18.42330 -17.81140 -17.78507 -17.45387 -17.15706 -16.97753 -16.79917 -16.45531 -16.40015 -16.14465 -16.08031 -15.42612 -15.22889 -15.21080 -14.84635 -14.74290 -14.55250 -14.45151 -14.33073 -14.18095 -14.16089 -13.54706 -13.44994 -13.31289 -13.22013 -13.03738 -12.87317 -12.71963 -12.41440 -12.31098 -12.23703 -12.05023 -11.96870 -11.86571 -11.60786 -11.58338 -11.42010 -11.29501 -11.21936 -10.96621 -10.50321 -10.09148 -10.00985 -9.90309 -9.51822 -9.23449 -4.98664 0.04430 0.22613 0.31178 0.41827 0.64619 1.30189 1.60344 1.65204 1.90586 1.99331 2.38125 2.55383 2.69694 3.45632 3.50418 3.61689 3.65224 3.67773 3.71321 3.82673 3.86168 3.89288 3.94138 3.96249 3.99065 4.12252 4.19594 4.22035 4.26056 4.34983 4.35997 4.40738 4.41759 4.43423 4.53238 4.62322 4.66124 4.69482 4.71049 4.76604 4.87170 4.90554 4.99716 5.00846 5.02415 5.04240 5.14634 5.18250 5.22598 5.24455 5.30089 5.39748 5.46428 5.51831 5.66123 5.75949 5.83078 6.44199 6.54465 6.74756 7.26429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.084 4.084 3 Si 0.793 3.207 4 C -0.084 4.084 5 C -0.161 4.161 6 C -0.072 4.072 7 C -0.205 4.205 8 C 0.117 3.883 9 O -0.340 6.340 10 C 0.058 3.942 11 C -0.103 4.103 12 C -0.127 4.127 13 C 0.510 3.490 14 O -0.589 6.589 15 N -0.700 5.700 16 C 0.113 3.887 17 H 0.080 0.920 18 C -0.124 4.124 19 C -0.065 4.065 20 H 0.120 0.880 21 C -0.057 4.057 22 C -0.111 4.111 23 C -0.099 4.099 24 C -0.110 4.110 25 Br -0.064 7.064 26 C -0.100 4.100 27 C -0.116 4.116 28 C -0.144 4.144 29 C -0.154 4.154 30 H 0.395 0.605 31 H 0.101 0.899 32 H -0.301 1.301 33 H -0.281 1.281 34 H 0.148 0.852 35 H 0.160 0.840 36 H 0.154 0.846 37 H 0.083 0.917 38 H 0.086 0.914 39 H 0.059 0.941 40 H 0.057 0.943 41 H 0.128 0.872 42 H 0.130 0.870 43 H 0.419 0.581 44 H 0.091 0.909 45 H 0.097 0.903 46 H 0.154 0.846 47 H 0.140 0.860 48 H 0.136 0.864 49 H 0.144 0.856 50 H 0.092 0.908 51 H 0.069 0.931 52 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.929 5.759 -8.693 11.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.193 4.193 3 Si 0.698 3.302 4 C -0.085 4.085 5 C -0.178 4.178 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.017 4.017 11 C -0.141 4.141 12 C -0.166 4.166 13 C 0.299 3.701 14 O -0.469 6.469 15 N -0.352 5.352 16 C 0.007 3.993 17 H 0.098 0.902 18 C -0.162 4.162 19 C -0.083 4.083 20 H 0.138 0.862 21 C -0.057 4.057 22 C -0.130 4.130 23 C -0.119 4.119 24 C -0.189 4.189 25 Br 0.022 6.978 26 C -0.120 4.120 27 C -0.135 4.135 28 C -0.183 4.183 29 C -0.173 4.173 30 H 0.245 0.755 31 H 0.119 0.881 32 H -0.229 1.229 33 H -0.208 1.208 34 H 0.165 0.835 35 H 0.177 0.823 36 H 0.172 0.828 37 H 0.101 0.899 38 H 0.104 0.896 39 H 0.078 0.922 40 H 0.076 0.924 41 H 0.146 0.854 42 H 0.148 0.852 43 H 0.257 0.743 44 H 0.110 0.890 45 H 0.115 0.885 46 H 0.171 0.829 47 H 0.157 0.843 48 H 0.154 0.846 49 H 0.161 0.839 50 H 0.111 0.889 51 H 0.088 0.912 52 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 4.025 4.918 -7.290 9.671 hybrid contribution 0.092 -0.898 0.371 0.976 sum 4.116 4.020 -6.919 8.999 Atomic orbital electron populations 1.86470 1.17356 1.82292 1.50448 1.25393 0.85310 1.11745 0.96878 0.93514 0.77752 0.74358 0.84561 1.20208 0.97830 0.93456 0.96997 1.21191 1.00448 1.00755 0.95447 1.21317 0.97333 0.93546 0.96775 1.21608 1.02605 0.96851 1.01327 1.19194 0.95187 0.83562 0.94919 1.86053 1.71675 1.22877 1.44845 1.23002 0.99618 0.93147 0.85891 1.21159 1.01610 0.92986 0.98325 1.21535 1.04661 0.90484 0.99923 1.21206 0.78914 0.89182 0.80814 1.90741 1.39779 1.76223 1.40187 1.45573 1.53362 1.11086 1.25210 1.21843 0.97745 0.81239 0.98472 0.90201 1.23361 0.95780 1.01559 0.95526 1.21654 0.98015 0.93598 0.95031 0.86192 1.20041 0.94853 0.95392 0.95442 1.21370 0.97690 0.97471 0.96468 1.21344 0.99122 0.91619 0.99792 1.21981 1.02527 0.91829 1.02610 1.96755 1.94380 1.22490 1.84212 1.21290 0.96187 0.99187 0.95344 1.21237 1.00518 0.91386 1.00319 1.23583 0.98875 0.99897 0.95897 1.20321 1.04262 0.94960 0.97722 0.75465 0.88116 1.22901 1.20760 0.83485 0.82254 0.82800 0.89909 0.89623 0.92185 0.92373 0.85351 0.85194 0.74285 0.88997 0.88461 0.82866 0.84264 0.84617 0.83873 0.88912 0.91228 0.86794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.63 12.77 -148.98 -1.90 -3.53 16 2 C -0.08 -0.15 2.82 71.24 0.20 0.05 16 3 Si 0.79 -1.56 29.79 68.60 2.04 0.49 16 4 C -0.08 -0.20 5.39 -19.88 -0.11 -0.31 16 5 C -0.16 0.26 8.67 22.28 0.19 0.45 16 6 C -0.07 0.24 10.04 22.25 0.22 0.46 16 7 C -0.21 0.28 9.04 22.37 0.20 0.48 16 8 C 0.12 0.53 6.69 22.50 0.15 0.68 16 9 O -0.34 -1.93 10.14 -92.34 -0.94 -2.87 16 10 C 0.06 -0.18 4.74 71.98 0.34 0.16 16 11 C -0.10 0.09 4.87 30.59 0.15 0.24 16 12 C -0.13 1.03 5.70 29.85 0.17 1.20 16 13 C 0.51 -0.21 7.83 87.66 0.69 0.47 16 14 O -0.59 -6.54 15.58 -3.01 -0.05 -6.59 16 15 N -0.70 4.42 5.26 -439.77 -2.32 2.10 16 16 C 0.11 -0.43 4.33 45.58 0.20 -0.24 16 17 H 0.08 0.16 7.46 -2.38 -0.02 0.14 16 18 C -0.12 0.97 7.29 31.12 0.23 1.19 16 19 C -0.06 0.51 3.86 -11.01 -0.04 0.47 16 20 H 0.12 -1.38 8.09 -2.39 -0.02 -1.40 16 21 C -0.06 0.23 5.29 -19.86 -0.11 0.12 16 22 C -0.11 0.42 9.71 22.27 0.22 0.63 16 23 C -0.10 0.05 9.79 22.29 0.22 0.27 16 24 C -0.11 -0.22 6.22 22.31 0.14 -0.08 16 25 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.89 16 26 C -0.10 -0.05 9.79 22.28 0.22 0.17 16 27 C -0.12 0.26 8.53 22.27 0.19 0.45 16 28 C -0.14 0.67 7.27 31.18 0.23 0.89 16 29 C -0.15 -0.98 9.55 22.37 0.21 -0.76 16 30 H 0.40 -2.21 8.70 -74.05 -0.64 -2.86 16 31 H 0.10 0.38 7.96 -2.39 -0.02 0.36 16 32 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 33 H -0.28 -0.52 7.11 99.48 0.71 0.19 16 34 H 0.15 -0.91 4.87 -2.91 -0.01 -0.92 16 35 H 0.16 -1.49 8.06 -2.91 -0.02 -1.52 16 36 H 0.15 -1.09 6.30 -2.91 -0.02 -1.11 16 37 H 0.08 -0.58 7.65 -2.39 -0.02 -0.60 16 38 H 0.09 -0.64 7.67 -2.39 -0.02 -0.66 16 39 H 0.06 0.23 8.10 -2.38 -0.02 0.21 16 40 H 0.06 0.24 8.10 -2.39 -0.02 0.22 16 41 H 0.13 -1.75 8.14 -2.39 -0.02 -1.77 16 42 H 0.13 -1.80 8.14 -2.38 -0.02 -1.82 16 43 H 0.42 -5.66 8.70 -92.71 -0.81 -6.46 16 44 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 45 H 0.10 -0.67 7.64 -2.39 -0.02 -0.69 16 46 H 0.15 -1.35 8.05 -2.91 -0.02 -1.37 16 47 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 48 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 49 H 0.14 -0.74 6.73 -2.91 -0.02 -0.76 16 50 H 0.09 -0.37 6.40 -2.39 -0.02 -0.39 16 51 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 52 H 0.11 1.03 8.06 -2.91 -0.02 1.01 16 Total: 0.00 -26.80 446.08 -0.38 -27.18 By element: Atomic # 1 Polarization: -22.45 SS G_CDS: -0.45 Total: -22.90 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: 3.91 Total: 7.01 kcal Atomic # 7 Polarization: 4.42 SS G_CDS: -2.32 Total: 2.10 kcal Atomic # 8 Polarization: -10.10 SS G_CDS: -2.88 Total: -12.99 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: 2.04 Total: 0.49 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.89 kcal Total: -26.80 -0.38 -27.18 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.519 kcal (2) G-P(sol) polarization free energy of solvation -26.798 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.182 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds