Wall clock time and date at job start Sat Mar 6 2021 11:15:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47509 * 2 1 4 4 C 1.50702 * 109.47007 * 239.99614 * 2 1 3 5 5 C 1.38273 * 119.94059 * 119.73091 * 4 2 1 6 6 C 1.38148 * 120.05257 * 179.72295 * 5 4 2 7 7 C 1.38728 * 119.94478 * 0.57359 * 6 5 4 8 8 O 1.35894 * 120.05711 * 179.68257 * 7 6 5 9 9 C 1.42904 * 116.99852 * 0.02562 * 8 7 6 10 10 C 1.50702 * 109.47002 * 180.02562 * 9 8 7 11 11 C 1.36415 * 125.80010 * 89.72465 * 10 9 8 12 12 C 1.47373 * 127.19128 * 359.97438 * 11 10 9 13 13 O 1.21609 * 120.00545 * 0.02562 * 12 11 10 14 14 N 1.34781 * 119.99861 * 180.02562 * 12 11 10 15 15 C 1.46494 * 120.00134 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.85061 * 23.80400 * 15 14 12 17 17 C 1.53778 * 113.61667 * 154.99558 * 15 14 12 18 18 C 1.53784 * 87.08127 * 89.11731 * 17 15 14 19 19 H 1.08995 * 113.61384 * 270.88709 * 18 17 15 20 20 C 1.50702 * 113.61595 * 139.98023 * 18 17 15 21 21 C 1.38234 * 119.98874 * 299.72514 * 20 18 17 22 22 C 1.38222 * 120.00936 * 179.76708 * 21 20 18 23 23 C 1.38324 * 119.98488 * 0.50849 * 22 21 20 24 24 Br 1.89103 * 120.00748 * 179.76643 * 23 22 21 25 25 C 1.38322 * 119.98629 * 359.74954 * 23 22 21 26 26 C 1.38220 * 119.98628 * 359.97438 * 25 23 22 27 27 C 1.53781 * 87.08030 * 25.43430 * 18 17 15 28 28 C 1.47022 * 105.61245 * 179.86812 * 11 10 9 29 29 C 1.34176 * 105.95583 * 0.38968 * 28 11 10 30 30 O 1.33659 * 125.79917 * 270.02426 * 10 9 8 31 31 C 1.38729 * 119.88797 * 359.69691 * 7 6 5 32 32 C 1.38143 * 119.94821 * 0.02562 * 31 7 6 33 33 H 0.96700 * 113.99509 * 59.99951 * 1 2 3 34 34 H 1.09004 * 109.46926 * 120.00048 * 2 1 3 35 35 H 1.48498 * 109.99634 * 298.68172 * 3 2 1 36 36 H 1.48502 * 109.99691 * 59.99915 * 3 2 1 37 37 H 1.07998 * 119.96907 * 359.97438 * 5 4 2 38 38 H 1.07995 * 120.02276 * 180.24633 * 6 5 4 39 39 H 1.08993 * 109.47571 * 300.00351 * 9 8 7 40 40 H 1.09006 * 109.46443 * 60.00777 * 9 8 7 41 41 H 0.97004 * 119.99643 * 359.97438 * 14 12 11 42 42 H 1.09007 * 113.61677 * 203.66314 * 17 15 14 43 43 H 1.09003 * 113.61855 * 334.48611 * 17 15 14 44 44 H 1.07999 * 119.99765 * 0.02562 * 21 20 18 45 45 H 1.08005 * 120.00744 * 180.28150 * 22 21 20 46 46 H 1.07997 * 120.01400 * 180.02562 * 25 23 22 47 47 H 1.07997 * 119.99577 * 179.97438 * 26 25 23 48 48 H 1.08994 * 113.61670 * 220.02508 * 27 18 17 49 49 H 1.08996 * 113.61848 * 89.11454 * 27 18 17 50 50 H 1.08000 * 127.02206 * 180.17974 * 28 11 10 51 51 H 1.08001 * 125.43597 * 179.72703 * 29 28 11 52 52 H 1.08003 * 120.03122 * 180.02562 * 31 7 6 53 53 H 1.07997 * 119.97777 * 180.02562 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7216 -0.0358 -2.1427 6 6 3.1881 -0.6865 -3.2685 7 6 2.8532 -2.0145 -3.4894 8 8 3.3055 -2.6549 -4.5994 9 6 4.1222 -1.8998 -5.4966 10 6 4.5257 -2.7682 -6.6602 11 6 3.8334 -2.9114 -7.8268 12 6 2.5636 -2.2602 -8.1949 13 8 2.0223 -1.4992 -7.4160 14 7 2.0021 -2.5081 -9.3948 15 6 0.7402 -1.8604 -9.7610 16 1 0.5663 -0.9332 -9.2150 17 6 0.5327 -1.7294 -11.2790 18 6 -0.1317 -3.1153 -11.2285 19 1 0.5688 -3.9403 -11.3573 20 6 -1.3473 -3.2346 -12.1114 21 6 -2.4360 -2.4087 -11.9034 22 6 -3.5492 -2.5144 -12.7159 23 6 -3.5777 -3.4542 -13.7305 24 35 -5.1030 -3.6039 -14.8383 25 6 -2.4902 -4.2841 -13.9349 26 6 -1.3752 -4.1737 -13.1255 27 6 -0.4657 -2.8147 -9.7578 28 6 4.6200 -3.8493 -8.6412 29 6 5.6857 -4.1805 -7.8963 30 8 5.6200 -3.5332 -6.7224 31 6 2.0555 -2.6875 -2.5755 32 6 1.5963 -2.0342 -1.4483 33 1 -0.3932 0.4417 -0.7651 34 1 1.7923 -0.5139 0.8900 35 1 1.5880 2.4585 -1.2242 36 1 1.5616 2.4678 1.2085 37 1 2.9777 0.9995 -1.9728 38 1 3.8085 -0.1602 -3.9787 39 1 3.5611 -1.0401 -5.8627 40 1 5.0142 -1.5554 -4.9732 41 1 2.4341 -3.1149 -10.0163 42 1 -0.1507 -0.9275 -11.5588 43 1 1.4629 -1.7101 -11.8469 44 1 -2.4152 -1.6778 -11.1086 45 1 -4.3980 -1.8660 -12.5562 46 1 -2.5118 -5.0176 -14.7272 47 1 -0.5261 -4.8219 -13.2847 48 1 -0.3415 -3.6730 -9.0976 49 1 -1.4219 -2.3096 -9.6216 50 1 4.3860 -4.2023 -9.6347 51 1 6.4707 -4.8600 -8.1936 52 1 1.7937 -3.7216 -2.7450 53 1 0.9757 -2.5578 -0.7363 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4549634.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:15:22 Heat of formation + Delta-G solvation = 8.697962 kcal Electronic energy + Delta-G solvation = -38589.874566 eV Core-core repulsion = 33407.756318 eV Total energy + Delta-G solvation = -5182.118248 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 484.076 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -43.71457 -41.59101 -41.30360 -40.31598 -39.28409 -38.81511 -37.31658 -34.92407 -33.99101 -33.02111 -32.74391 -32.04904 -31.98558 -31.40337 -30.37100 -27.99559 -26.73066 -26.34453 -26.01524 -24.64047 -23.87468 -23.76771 -22.66178 -22.37864 -22.08506 -21.06185 -20.07225 -19.51514 -19.22621 -18.40968 -18.04887 -17.40918 -17.22074 -17.11392 -16.96179 -16.74402 -16.51463 -16.31243 -16.16942 -16.10962 -15.88325 -15.75608 -15.50348 -15.14127 -14.92651 -14.69046 -14.57985 -14.50622 -14.40267 -14.29957 -14.19962 -13.82821 -13.59515 -13.51542 -13.49933 -13.45941 -13.12807 -12.90013 -12.42473 -12.32036 -12.13268 -12.11959 -12.06641 -11.87642 -11.65408 -11.43676 -11.29914 -11.24997 -11.17756 -10.96521 -10.60851 -10.17657 -10.06052 -10.02123 -9.82391 -9.52474 -9.25327 -4.92885 -0.04406 0.04180 0.25719 0.28660 0.30911 0.64278 1.03889 1.32198 1.51609 1.60361 1.95526 2.01997 2.10171 2.46421 2.55094 2.63054 3.34740 3.42144 3.42351 3.57418 3.63077 3.66929 3.68827 3.73153 3.78621 3.81397 3.90376 3.93663 3.94021 3.94585 4.11095 4.17942 4.28460 4.34452 4.40064 4.41427 4.46398 4.53564 4.55103 4.66147 4.68134 4.69978 4.75271 4.81091 4.84490 4.87775 4.94676 4.99497 5.02960 5.11677 5.13573 5.22280 5.22801 5.24388 5.27790 5.46121 5.47376 5.62421 5.67852 5.82517 5.89277 6.25120 6.43105 6.48106 7.09798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.078 4.078 3 Si 0.765 3.235 4 C -0.158 4.158 5 C -0.076 4.076 6 C -0.205 4.205 7 C 0.125 3.875 8 O -0.322 6.322 9 C 0.134 3.866 10 C 0.041 3.959 11 C -0.224 4.224 12 C 0.586 3.414 13 O -0.571 6.571 14 N -0.689 5.689 15 C 0.116 3.884 16 H 0.088 0.912 17 C -0.122 4.122 18 C -0.066 4.066 19 H 0.117 0.883 20 C -0.056 4.056 21 C -0.115 4.115 22 C -0.100 4.100 23 C -0.110 4.110 24 Br -0.063 7.063 25 C -0.099 4.099 26 C -0.112 4.112 27 C -0.144 4.144 28 C -0.196 4.196 29 C -0.012 4.012 30 O -0.177 6.177 31 C -0.163 4.163 32 C -0.058 4.058 33 H 0.385 0.615 34 H 0.126 0.874 35 H -0.285 1.285 36 H -0.302 1.302 37 H 0.150 0.850 38 H 0.148 0.852 39 H 0.107 0.893 40 H 0.102 0.898 41 H 0.416 0.584 42 H 0.102 0.898 43 H 0.091 0.909 44 H 0.145 0.855 45 H 0.137 0.863 46 H 0.139 0.861 47 H 0.152 0.848 48 H 0.065 0.935 49 H 0.098 0.902 50 H 0.193 0.807 51 H 0.252 0.748 52 H 0.132 0.868 53 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.526 -1.472 -4.297 8.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.186 4.186 3 Si 0.671 3.329 4 C -0.159 4.159 5 C -0.093 4.093 6 C -0.224 4.224 7 C 0.080 3.920 8 O -0.237 6.237 9 C 0.060 3.940 10 C -0.012 4.012 11 C -0.229 4.229 12 C 0.375 3.625 13 O -0.452 6.452 14 N -0.340 5.340 15 C 0.010 3.990 16 H 0.106 0.894 17 C -0.160 4.160 18 C -0.084 4.084 19 H 0.135 0.865 20 C -0.057 4.057 21 C -0.134 4.134 22 C -0.119 4.119 23 C -0.189 4.189 24 Br 0.022 6.978 25 C -0.119 4.119 26 C -0.130 4.130 27 C -0.183 4.183 28 C -0.215 4.215 29 C -0.078 4.078 30 O -0.073 6.073 31 C -0.181 4.181 32 C -0.076 4.076 33 H 0.234 0.766 34 H 0.144 0.856 35 H -0.212 1.212 36 H -0.230 1.230 37 H 0.167 0.833 38 H 0.166 0.834 39 H 0.124 0.876 40 H 0.120 0.880 41 H 0.254 0.746 42 H 0.121 0.879 43 H 0.110 0.890 44 H 0.163 0.837 45 H 0.155 0.845 46 H 0.157 0.843 47 H 0.170 0.830 48 H 0.084 0.916 49 H 0.116 0.884 50 H 0.210 0.790 51 H 0.268 0.732 52 H 0.150 0.850 53 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 6.629 -0.705 -3.492 7.525 hybrid contribution -1.035 -0.426 -0.848 1.404 sum 5.594 -1.131 -4.340 7.170 Atomic orbital electron populations 1.86559 1.18724 1.80352 1.50128 1.25179 0.83260 1.11682 0.98522 0.94162 0.90338 0.72092 0.76294 1.20283 1.01946 0.95328 0.98296 1.21020 0.95628 1.00006 0.92672 1.21412 1.06077 0.93725 1.01143 1.19171 0.94613 0.91885 0.86324 1.86048 1.65291 1.40659 1.31690 1.21155 0.95457 0.91235 0.86154 1.22056 0.87078 0.95932 0.96150 1.21362 0.98358 1.05888 0.97270 1.17427 0.83186 0.80127 0.81769 1.90779 1.64576 1.38403 1.51421 1.45305 1.23871 1.47934 1.16938 1.21872 0.83307 0.96529 0.97267 0.89408 1.23371 1.02140 0.96878 0.93610 1.21644 0.94517 0.99168 0.93044 0.86509 1.20005 0.95369 0.94755 0.95539 1.21243 0.92489 1.00029 0.99616 1.21294 0.99596 0.97152 0.93889 1.21983 0.94550 1.02693 0.99708 1.96755 1.37100 1.98028 1.65932 1.21336 0.92258 0.98226 1.00057 1.21356 0.98316 0.98673 0.94666 1.23572 0.98825 0.99923 0.95956 1.23254 0.95231 1.00217 1.02769 1.24919 1.02136 0.98513 0.82201 1.83800 1.38904 1.46762 1.37790 1.20620 1.01198 1.01415 0.94900 1.20936 0.96965 0.93884 0.95775 0.76589 0.85611 1.21181 1.23014 0.83334 0.83411 0.87569 0.87960 0.74649 0.87940 0.89019 0.83720 0.84546 0.84284 0.82986 0.91638 0.88391 0.78985 0.73229 0.84961 0.84301 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.34 12.77 -148.98 -1.90 -4.24 16 2 C -0.08 -0.07 2.82 71.24 0.20 0.13 16 3 Si 0.77 -0.61 29.78 68.60 2.04 1.43 16 4 C -0.16 -0.39 5.39 -19.85 -0.11 -0.49 16 5 C -0.08 -0.10 8.66 22.26 0.19 0.09 16 6 C -0.21 -0.65 9.04 22.37 0.20 -0.45 16 7 C 0.12 0.88 6.69 22.50 0.15 1.03 16 8 O -0.32 -2.80 10.12 -92.36 -0.93 -3.73 16 9 C 0.13 0.55 4.73 71.24 0.34 0.88 16 10 C 0.04 0.17 7.00 25.26 0.18 0.34 16 11 C -0.22 -0.53 6.31 -18.99 -0.12 -0.65 16 12 C 0.59 2.75 7.81 86.65 0.68 3.43 16 13 O -0.57 -6.90 14.45 -4.06 -0.06 -6.96 16 14 N -0.69 1.78 5.26 -443.36 -2.33 -0.55 16 15 C 0.12 -0.31 4.32 45.52 0.20 -0.12 16 16 H 0.09 0.16 7.46 -2.39 -0.02 0.14 16 17 C -0.12 0.88 7.29 31.12 0.23 1.11 16 18 C -0.07 0.45 3.86 -11.01 -0.04 0.41 16 19 H 0.12 -1.16 8.10 -2.39 -0.02 -1.18 16 20 C -0.06 0.20 5.29 -19.86 -0.11 0.09 16 21 C -0.12 0.24 8.62 22.26 0.19 0.43 16 22 C -0.10 -0.06 9.79 22.29 0.22 0.16 16 23 C -0.11 -0.24 6.22 22.31 0.14 -0.10 16 24 Br -0.06 -0.22 33.70 -20.37 -0.69 -0.91 16 25 C -0.10 0.01 9.79 22.29 0.22 0.23 16 26 C -0.11 0.35 9.71 22.27 0.22 0.57 16 27 C -0.14 0.50 7.25 31.12 0.23 0.73 16 28 C -0.20 1.01 10.60 23.65 0.25 1.26 16 29 C -0.01 0.07 12.03 66.89 0.80 0.87 16 30 O -0.18 -0.27 10.52 4.41 0.05 -0.22 16 31 C -0.16 -1.02 9.99 22.36 0.22 -0.80 16 32 C -0.06 -0.24 9.60 22.25 0.21 -0.03 16 33 H 0.39 -0.30 8.70 -74.06 -0.64 -0.95 16 34 H 0.13 -0.13 7.96 -2.38 -0.02 -0.15 16 35 H -0.29 -0.94 7.10 99.48 0.71 -0.23 16 36 H -0.30 -2.03 7.11 99.48 0.71 -1.32 16 37 H 0.15 -0.50 4.87 -2.91 -0.01 -0.51 16 38 H 0.15 -0.14 6.30 -2.91 -0.02 -0.16 16 39 H 0.11 0.56 6.02 -2.39 -0.01 0.54 16 40 H 0.10 -0.09 7.66 -2.38 -0.02 -0.11 16 41 H 0.42 -3.63 7.87 -92.71 -0.73 -4.36 16 42 H 0.10 -0.73 7.73 -2.38 -0.02 -0.74 16 43 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 44 H 0.15 -0.76 6.64 -2.91 -0.02 -0.78 16 45 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 46 H 0.14 -0.30 8.06 -2.91 -0.02 -0.33 16 47 H 0.15 -1.21 8.06 -2.91 -0.02 -1.24 16 48 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 49 H 0.10 -0.36 6.30 -2.39 -0.02 -0.38 16 50 H 0.19 -2.43 7.74 -2.91 -0.02 -2.45 16 51 H 0.25 -3.65 8.06 -2.91 -0.02 -3.68 16 52 H 0.13 0.68 8.06 -2.91 -0.02 0.66 16 53 H 0.14 0.31 8.06 -2.91 -0.02 0.29 16 Total: 0.00 -24.59 461.62 0.53 -24.06 By element: Atomic # 1 Polarization: -17.67 SS G_CDS: -0.34 Total: -18.00 kcal Atomic # 6 Polarization: 4.43 SS G_CDS: 4.69 Total: 9.12 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -2.33 Total: -0.55 kcal Atomic # 8 Polarization: -12.30 SS G_CDS: -2.85 Total: -15.15 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: 2.04 Total: 1.43 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.69 Total: -0.91 kcal Total: -24.59 0.53 -24.06 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4549634.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.759 kcal (2) G-P(sol) polarization free energy of solvation -24.589 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.528 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.061 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds