Wall clock time and date at job start Sat Mar 6 2021 11:15:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.39154 * 120.07345 * 180.02562 * 3 2 1 5 5 O 1.35987 * 120.07525 * 359.97438 * 4 3 2 6 6 C 1.42904 * 117.00217 * 180.02562 * 5 4 3 7 7 C 1.50700 * 109.47145 * 180.02562 * 6 5 4 8 8 O 1.21284 * 120.00164 * 359.97438 * 7 6 5 9 9 N 1.34771 * 119.99795 * 180.02562 * 7 6 5 10 10 C 1.46503 * 119.99936 * 179.97438 * 9 7 6 11 11 H 1.09001 * 112.85228 * 25.32820 * 10 9 7 12 12 C 1.53781 * 113.61452 * 156.52424 * 10 9 7 13 13 C 1.53786 * 87.07929 * 89.11831 * 12 10 9 14 14 H 1.09007 * 113.61023 * 270.88329 * 13 12 10 15 15 C 1.50698 * 113.61515 * 140.06734 * 13 12 10 16 16 C 1.38242 * 119.98776 * 299.72131 * 15 13 12 17 17 C 1.38219 * 120.00869 * 179.76759 * 16 15 13 18 18 C 1.38322 * 119.99074 * 0.50640 * 17 16 15 19 19 Br 1.89099 * 120.01180 * 179.76313 * 18 17 16 20 20 C 1.38327 * 119.97655 * 359.74945 * 18 17 16 21 21 C 1.38212 * 119.99263 * 359.97438 * 20 18 17 22 22 C 1.53782 * 113.61511 * 254.13357 * 10 9 7 23 23 C 1.38562 * 119.85273 * 179.97438 * 4 3 2 24 24 C 1.38253 * 120.00018 * 359.97438 * 23 4 3 25 25 N 1.48001 * 119.92440 * 180.02562 * 24 23 4 26 26 O 1.21793 * 120.00501 * 0.02562 * 25 24 23 27 27 O 1.21799 * 119.99706 * 179.97438 * 25 24 23 28 28 C 1.38254 * 120.14464 * 359.97438 * 24 23 4 29 29 C 1.50700 * 119.92591 * 179.97438 * 28 24 23 30 30 O 1.42892 * 109.47095 * 74.99893 * 29 28 24 31 31 Si 1.86302 * 109.47104 * 195.00084 * 29 28 24 32 32 C 1.38244 * 120.14707 * 359.74633 * 28 24 23 33 33 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 34 34 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 35 35 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 36 36 H 1.08996 * 109.47217 * 300.00125 * 6 5 4 37 37 H 1.09004 * 109.46575 * 60.00471 * 6 5 4 38 38 H 0.97002 * 120.00012 * 359.97438 * 9 7 6 39 39 H 1.09004 * 113.61451 * 203.66359 * 12 10 9 40 40 H 1.08997 * 113.61712 * 334.48461 * 12 10 9 41 41 H 1.07998 * 119.99515 * 0.02562 * 16 15 13 42 42 H 1.08002 * 120.00693 * 180.23296 * 17 16 15 43 43 H 1.08006 * 120.00263 * 179.97438 * 20 18 17 44 44 H 1.08001 * 119.99920 * 180.02562 * 21 20 18 45 45 H 1.09002 * 113.61417 * 25.42938 * 22 10 9 46 46 H 1.08993 * 113.61327 * 156.33642 * 22 10 9 47 47 H 1.07996 * 120.00374 * 180.02562 * 23 4 3 48 48 H 1.09000 * 109.47125 * 315.00000 * 29 28 24 49 49 H 0.96705 * 114.00348 * 59.99895 * 30 29 28 50 50 H 1.48504 * 109.99830 * 58.68039 * 31 29 28 51 51 H 1.48496 * 109.99569 * 179.97438 * 31 29 28 52 52 H 1.08001 * 120.00049 * 180.27280 * 32 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1796 0.1476 -0.0005 6 6 5.6004 0.3005 -0.0005 7 6 6.2519 -1.0584 -0.0012 8 8 5.5670 -2.0593 -0.0011 9 7 7.5957 -1.1614 -0.0008 10 6 8.2290 -2.4825 -0.0008 11 1 7.5935 -3.2566 -0.4309 12 6 9.6609 -2.4791 -0.5617 13 6 10.1376 -2.1918 0.8719 14 1 10.1882 -1.1293 1.1106 15 6 11.3909 -2.9372 1.2522 16 6 11.4038 -4.3195 1.2384 17 6 12.5545 -5.0035 1.5825 18 6 13.6901 -4.3050 1.9507 19 35 15.2627 -5.2404 2.4280 20 6 13.6752 -2.9219 1.9694 21 6 12.5258 -2.2386 1.6198 22 6 8.8423 -2.8717 1.3547 23 6 4.0604 2.5231 -0.0011 24 6 3.3031 3.6798 -0.0016 25 7 3.9717 5.0001 -0.0028 26 8 5.1878 5.0670 -0.0037 27 8 3.3058 6.0199 -0.0037 28 6 1.9225 3.6057 -0.0021 29 6 1.1018 4.8696 -0.0021 30 8 1.1353 5.4593 -1.3033 31 14 -0.6595 4.4663 0.4517 32 6 1.2933 2.3747 -0.0074 33 1 -0.3634 -1.0277 -0.0005 34 1 -0.3633 0.5139 -0.8900 35 1 -0.3633 0.5139 0.8900 36 1 5.9067 0.8503 -0.8905 37 1 5.9066 0.8502 0.8895 38 1 8.1435 -0.3609 -0.0004 39 1 9.9829 -3.4482 -0.9428 40 1 9.8548 -1.6643 -1.2592 41 1 10.5158 -4.8649 0.9548 42 1 12.5656 -6.0834 1.5680 43 1 14.5616 -2.3761 2.2573 44 1 12.5141 -1.1588 1.6339 45 1 8.3761 -2.3727 2.2042 46 1 8.9408 -3.9478 1.4964 47 1 5.1387 2.5838 -0.0019 48 1 1.5131 5.5699 0.7249 49 1 0.7837 4.8907 -2.0020 50 1 -0.7048 3.8233 1.7896 51 1 -1.4791 5.7046 0.4559 52 1 0.2147 2.3196 -0.0123 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:15:29 Heat of formation + Delta-G solvation = -34.740724 kcal Electronic energy + Delta-G solvation = -40791.436709 eV Core-core repulsion = 35161.096804 eV Total energy + Delta-G solvation = -5630.339905 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 493.071 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -43.39895 -42.13021 -41.61973 -40.63755 -39.71545 -39.22512 -38.70579 -37.72635 -37.12367 -34.83794 -33.12920 -32.66914 -32.49742 -32.04248 -30.60741 -29.61787 -28.72857 -27.90915 -26.71229 -26.05795 -25.60293 -24.05443 -23.78498 -23.21811 -22.46919 -21.97766 -20.78376 -20.19417 -19.83734 -19.50607 -18.81173 -18.67452 -18.34025 -18.07089 -17.74062 -17.54438 -17.36134 -16.90830 -16.84548 -16.47921 -16.36180 -16.14779 -16.07881 -15.67688 -15.66588 -15.18083 -15.11658 -14.85753 -14.62570 -14.50099 -14.38730 -14.26710 -13.96108 -13.88921 -13.49356 -13.47332 -13.42806 -13.02059 -12.92293 -12.66806 -12.49760 -12.43094 -12.41130 -12.32643 -12.26968 -12.21273 -12.06640 -11.86889 -11.77843 -11.42784 -11.29292 -11.22852 -11.09695 -10.53116 -10.45465 -10.19642 -10.01251 -9.51590 -9.48641 -5.13389 -1.36231 -0.43036 0.04964 0.16569 0.30943 0.31843 0.65139 1.13128 1.22989 1.37336 1.57510 1.89917 1.90477 1.94204 2.32804 2.55945 2.98388 3.17779 3.27520 3.43469 3.45680 3.50995 3.56444 3.64574 3.68638 3.82641 3.88228 3.92769 3.94394 3.94790 3.98694 4.06238 4.11902 4.20137 4.22999 4.35459 4.39897 4.41256 4.42199 4.55374 4.62070 4.70869 4.73765 4.77658 4.82702 4.83391 4.88566 5.01441 5.04286 5.12297 5.23376 5.23719 5.25466 5.44947 5.58572 5.64255 5.83759 6.06565 6.38402 6.46934 6.71964 7.07430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.005 4.005 2 O -0.307 6.307 3 C 0.171 3.829 4 C 0.101 3.899 5 O -0.290 6.290 6 C 0.026 3.974 7 C 0.519 3.481 8 O -0.565 6.565 9 N -0.692 5.692 10 C 0.117 3.883 11 H 0.086 0.914 12 C -0.123 4.123 13 C -0.067 4.067 14 H 0.119 0.881 15 C -0.056 4.056 16 C -0.115 4.115 17 C -0.100 4.100 18 C -0.111 4.111 19 Br -0.064 7.064 20 C -0.100 4.100 21 C -0.112 4.112 22 C -0.144 4.144 23 C -0.110 4.110 24 C -0.046 4.046 25 N 0.036 4.964 26 O -0.185 6.185 27 O -0.167 6.167 28 C -0.040 4.040 29 C -0.091 4.091 30 O -0.536 6.536 31 Si 0.786 3.214 32 C -0.163 4.163 33 H 0.121 0.879 34 H 0.094 0.906 35 H 0.079 0.921 36 H 0.130 0.870 37 H 0.128 0.872 38 H 0.422 0.578 39 H 0.101 0.899 40 H 0.093 0.907 41 H 0.146 0.854 42 H 0.137 0.863 43 H 0.138 0.862 44 H 0.152 0.848 45 H 0.069 0.931 46 H 0.097 0.903 47 H 0.184 0.816 48 H 0.114 0.886 49 H 0.393 0.607 50 H -0.272 1.272 51 H -0.291 1.291 52 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.670 -2.330 -2.366 4.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.219 6.219 3 C 0.122 3.878 4 C 0.054 3.946 5 O -0.203 6.203 6 C -0.051 4.051 7 C 0.305 3.695 8 O -0.442 6.442 9 N -0.346 5.346 10 C 0.011 3.989 11 H 0.104 0.896 12 C -0.161 4.161 13 C -0.085 4.085 14 H 0.137 0.863 15 C -0.057 4.057 16 C -0.133 4.133 17 C -0.120 4.120 18 C -0.190 4.190 19 Br 0.021 6.979 20 C -0.120 4.120 21 C -0.131 4.131 22 C -0.182 4.182 23 C -0.129 4.129 24 C -0.131 4.131 25 N 0.549 4.451 26 O -0.396 6.396 27 O -0.380 6.380 28 C -0.042 4.042 29 C -0.199 4.199 30 O -0.343 6.343 31 Si 0.689 3.311 32 C -0.181 4.181 33 H 0.139 0.861 34 H 0.112 0.888 35 H 0.098 0.902 36 H 0.147 0.853 37 H 0.145 0.855 38 H 0.260 0.740 39 H 0.119 0.881 40 H 0.111 0.889 41 H 0.164 0.836 42 H 0.154 0.846 43 H 0.156 0.844 44 H 0.170 0.830 45 H 0.088 0.912 46 H 0.115 0.885 47 H 0.201 0.799 48 H 0.132 0.868 49 H 0.242 0.758 50 H -0.198 1.198 51 H -0.218 1.218 52 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -4.222 -3.814 -1.307 5.838 hybrid contribution 1.149 1.274 0.348 1.750 sum -3.073 -2.540 -0.959 4.101 Atomic orbital electron populations 1.23821 0.74686 1.07099 1.04204 1.86333 1.24860 1.24501 1.86175 1.18682 0.89180 0.86383 0.93543 1.17953 0.88810 0.85102 1.02784 1.86300 1.18470 1.26789 1.88722 1.22918 0.78822 0.96064 1.07332 1.20292 0.83020 0.90383 0.75774 1.90788 1.63905 1.39789 1.49736 1.45347 1.05051 1.09786 1.74421 1.21857 0.94232 0.85065 0.97728 0.89594 1.23369 0.92260 1.04528 0.95911 1.21729 0.89918 1.00247 0.96648 0.86270 1.20024 0.95384 0.93575 0.96699 1.21255 0.98016 0.94255 0.99811 1.21299 0.91775 1.00861 0.98040 1.21987 0.93374 0.95487 1.08151 1.96756 1.33255 1.76047 1.91837 1.21336 0.99903 0.91997 0.98749 1.21359 0.91664 1.01338 0.98696 1.23618 0.95279 1.02036 0.97293 1.20906 1.03019 0.88118 1.00874 1.20564 0.92766 0.81928 1.17829 1.43717 1.00819 1.03444 0.97146 1.94497 0.96527 1.94121 1.54497 1.94580 1.64416 1.25423 1.53625 1.20224 0.91080 0.97654 0.95266 1.25760 1.10586 0.92771 0.90804 1.86669 1.87114 1.44585 1.15931 0.94404 0.71780 0.82149 0.82809 1.21083 1.01770 0.88095 1.07198 0.86057 0.88790 0.90198 0.85282 0.85470 0.74020 0.88085 0.88853 0.83601 0.84556 0.84414 0.83014 0.91175 0.88487 0.79897 0.86836 0.75798 1.19790 1.21797 0.78986 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.05 9.81 113.37 1.11 1.16 16 2 O -0.31 0.34 10.28 -79.59 -0.82 -0.48 16 3 C 0.17 -0.32 6.70 22.57 0.15 -0.17 16 4 C 0.10 -0.04 6.70 22.57 0.15 0.11 16 5 O -0.29 -0.60 9.45 -66.99 -0.63 -1.23 16 6 C 0.03 -0.15 5.22 71.24 0.37 0.22 16 7 C 0.52 -0.22 7.91 87.66 0.69 0.47 16 8 O -0.56 -6.20 16.12 15.99 0.26 -5.94 16 9 N -0.69 5.02 5.26 -440.03 -2.32 2.71 16 10 C 0.12 -0.63 4.29 45.52 0.20 -0.43 16 11 H 0.09 -0.02 7.50 -2.39 -0.02 -0.04 16 12 C -0.12 1.11 7.29 31.12 0.23 1.34 16 13 C -0.07 0.58 3.87 -10.92 -0.04 0.54 16 14 H 0.12 -1.43 8.09 -2.38 -0.02 -1.44 16 15 C -0.06 0.26 5.29 -19.86 -0.11 0.15 16 16 C -0.11 0.35 8.63 22.27 0.19 0.54 16 17 C -0.10 0.00 9.79 22.29 0.22 0.22 16 18 C -0.11 -0.20 6.22 22.31 0.14 -0.07 16 19 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.90 16 20 C -0.10 0.04 9.79 22.28 0.22 0.26 16 21 C -0.11 0.42 9.71 22.26 0.22 0.64 16 22 C -0.14 0.85 7.27 31.21 0.23 1.08 16 23 C -0.11 0.17 8.54 22.35 0.19 0.36 16 24 C -0.05 -0.12 6.85 36.39 0.25 0.13 16 25 N 0.04 0.32 4.45 -46.46 -0.21 0.11 16 26 O -0.19 -1.83 18.44 18.90 0.35 -1.48 16 27 O -0.17 -2.06 14.62 25.11 0.37 -1.70 16 28 C -0.04 0.05 5.26 -19.86 -0.10 -0.06 16 29 C -0.09 0.04 1.74 71.24 0.12 0.16 16 30 O -0.54 -0.38 11.79 -129.60 -1.53 -1.90 16 31 Si 0.79 -4.49 29.91 68.60 2.05 -2.43 16 32 C -0.16 0.96 7.64 22.35 0.17 1.13 16 33 H 0.12 -1.47 8.14 -2.39 -0.02 -1.49 16 34 H 0.09 -1.49 7.65 -2.39 -0.02 -1.50 16 35 H 0.08 -1.09 7.68 -2.38 -0.02 -1.10 16 36 H 0.13 -1.53 7.66 -2.39 -0.02 -1.55 16 37 H 0.13 -1.48 7.67 -2.38 -0.02 -1.50 16 38 H 0.42 -6.07 8.70 -92.71 -0.81 -6.88 16 39 H 0.10 -0.85 7.73 -2.39 -0.02 -0.87 16 40 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 41 H 0.15 -0.94 6.65 -2.91 -0.02 -0.96 16 42 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 43 H 0.14 -0.31 8.06 -2.91 -0.02 -0.33 16 44 H 0.15 -1.28 8.05 -2.91 -0.02 -1.30 16 45 H 0.07 -0.29 8.14 -2.39 -0.02 -0.30 16 46 H 0.10 -0.55 6.31 -2.39 -0.02 -0.57 16 47 H 0.18 -1.15 5.85 -2.91 -0.02 -1.16 16 48 H 0.11 0.51 6.07 -2.39 -0.01 0.49 16 49 H 0.39 -3.66 8.70 -74.05 -0.64 -4.30 16 50 H -0.27 0.63 7.11 99.48 0.71 1.34 16 51 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 52 H 0.19 -2.53 3.37 -2.91 -0.01 -2.54 16 Total: 0.00 -33.82 455.00 1.06 -32.76 By element: Atomic # 1 Polarization: -26.93 SS G_CDS: -0.37 Total: -27.31 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: 4.60 Total: 7.78 kcal Atomic # 7 Polarization: 5.34 SS G_CDS: -2.52 Total: 2.82 kcal Atomic # 8 Polarization: -10.72 SS G_CDS: -2.01 Total: -12.73 kcal Atomic # 14 Polarization: -4.49 SS G_CDS: 2.05 Total: -2.43 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.90 kcal Total: -33.82 1.06 -32.76 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.980 kcal (2) G-P(sol) polarization free energy of solvation -33.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.802 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.760 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds