Wall clock time and date at job start Sat Mar 6 2021 11:15:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.38267 * 119.94219 * 119.72516 * 4 2 1 6 6 C 1.38146 * 120.05554 * 179.72698 * 5 4 2 7 7 C 1.38733 * 119.94011 * 0.54742 * 6 5 4 8 8 O 1.35899 * 120.05436 * 179.75096 * 7 6 5 9 9 C 1.42894 * 117.00420 * 359.97438 * 8 7 6 10 10 F 1.39903 * 109.46940 * 300.00555 * 9 8 7 11 11 F 1.39901 * 109.47150 * 60.00076 * 9 8 7 12 12 C 1.50698 * 109.47718 * 180.02562 * 9 8 7 13 13 O 1.21281 * 120.00042 * 0.02562 * 12 9 8 14 14 N 1.34770 * 120.00182 * 179.97438 * 12 9 8 15 15 C 1.46507 * 120.00343 * 180.02562 * 14 12 9 16 16 H 1.09003 * 112.84326 * 23.80441 * 15 14 12 17 17 C 1.53778 * 113.61792 * 154.99837 * 15 14 12 18 18 C 1.53784 * 87.07964 * 89.11892 * 17 15 14 19 19 H 1.09004 * 113.61148 * 270.88349 * 18 17 15 20 20 C 1.50695 * 113.61234 * 140.06663 * 18 17 15 21 21 C 1.38247 * 119.98879 * 299.72075 * 20 18 17 22 22 C 1.38221 * 120.00499 * 179.72752 * 21 20 18 23 23 C 1.38319 * 119.99258 * 0.55287 * 22 21 20 24 24 Br 1.89098 * 120.01163 * 179.70348 * 23 22 21 25 25 C 1.38329 * 119.98152 * 359.72697 * 23 22 21 26 26 C 1.38215 * 119.98849 * 359.97438 * 25 23 22 27 27 C 1.53776 * 113.61416 * 252.50256 * 15 14 12 28 28 C 1.38731 * 119.88948 * 359.72638 * 7 6 5 29 29 C 1.38139 * 119.94606 * 0.02562 * 28 7 6 30 30 H 0.96698 * 113.99898 * 59.99565 * 1 2 3 31 31 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 32 32 H 1.48504 * 110.00019 * 298.68426 * 3 2 1 33 33 H 1.48503 * 110.00152 * 60.00114 * 3 2 1 34 34 H 1.07995 * 119.97264 * 359.97438 * 5 4 2 35 35 H 1.07994 * 120.03112 * 180.27943 * 6 5 4 36 36 H 0.97004 * 120.00148 * 0.02562 * 14 12 9 37 37 H 1.08996 * 113.61448 * 203.66304 * 17 15 14 38 38 H 1.08999 * 113.61465 * 334.48486 * 17 15 14 39 39 H 1.07992 * 119.99321 * 359.97438 * 21 20 18 40 40 H 1.07997 * 120.00173 * 180.25465 * 22 21 20 41 41 H 1.08003 * 120.00511 * 179.97438 * 25 23 22 42 42 H 1.07996 * 119.99639 * 179.97438 * 26 25 23 43 43 H 1.08999 * 113.61820 * 25.42743 * 27 15 14 44 44 H 1.09002 * 113.61341 * 156.33431 * 27 15 14 45 45 H 1.08007 * 120.02679 * 179.97438 * 28 7 6 46 46 H 1.07999 * 119.97308 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7214 -0.0357 -2.1427 6 6 3.1878 -0.6862 -3.2686 7 6 2.8533 -2.0144 -3.4893 8 8 3.3067 -2.6552 -4.5987 9 6 4.1230 -1.9001 -5.4960 10 9 3.4019 -0.7976 -5.9669 11 9 5.2672 -1.4564 -4.8243 12 6 4.5279 -2.7688 -6.6589 13 8 4.1537 -3.9212 -6.7142 14 7 5.3049 -2.2650 -7.6381 15 6 5.6980 -3.1094 -8.7689 16 1 5.0110 -3.9389 -8.9367 17 6 6.0292 -2.3163 -10.0441 18 6 7.4759 -2.2422 -9.5278 19 1 7.6694 -1.3768 -8.8940 20 6 8.5120 -2.4202 -10.6075 21 6 8.5502 -3.5906 -11.3423 22 6 9.4968 -3.7520 -12.3365 23 6 10.4131 -2.7470 -12.5885 24 35 11.7137 -2.9707 -13.9428 25 6 10.3782 -1.5784 -11.8491 26 6 9.4274 -1.4153 -10.8593 27 6 7.1773 -3.5286 -8.7397 28 6 2.0557 -2.6875 -2.5753 29 6 1.5961 -2.0340 -1.4484 30 1 -0.3933 0.4418 -0.7650 31 1 1.7923 -0.5139 0.8900 32 1 1.5879 2.4586 -1.2242 33 1 1.5616 2.4679 1.2085 34 1 2.9775 0.9997 -1.9729 35 1 3.8086 -0.1601 -3.9786 36 1 5.6038 -1.3432 -7.5942 37 1 5.9218 -2.8975 -10.9600 38 1 5.5328 -1.3474 -10.0970 39 1 7.8378 -4.3772 -11.1421 40 1 9.5240 -4.6647 -12.9132 41 1 11.0938 -0.7936 -12.0453 42 1 9.4003 -0.5032 -10.2817 43 1 7.6089 -3.5376 -7.7389 44 1 7.3836 -4.4411 -9.2991 45 1 1.7936 -3.7215 -2.7451 46 1 0.9748 -2.5574 -0.7368 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:15:39 Heat of formation + Delta-G solvation = -101.458004 kcal Electronic energy + Delta-G solvation = -35172.790501 eV Core-core repulsion = 29905.885813 eV Total energy + Delta-G solvation = -5266.904688 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.042 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -50.89950 -48.86751 -41.83199 -41.36775 -40.60841 -39.40429 -38.89873 -37.37542 -35.12011 -33.11948 -32.45210 -32.04607 -32.01507 -30.50109 -29.03197 -26.74982 -26.50165 -25.77287 -24.53532 -23.88111 -22.95951 -22.50425 -22.36043 -20.65737 -20.44197 -19.70343 -19.69179 -18.66884 -18.10383 -17.61422 -17.32961 -16.93491 -16.69732 -16.45104 -16.38473 -16.25285 -16.09125 -15.88192 -15.76465 -15.42843 -15.36649 -15.20280 -15.17002 -15.11046 -14.78313 -14.50919 -14.40609 -14.39138 -14.30579 -14.22678 -13.60322 -13.54388 -13.45970 -13.03671 -12.95920 -12.43780 -12.40640 -12.26256 -12.13012 -11.93604 -11.76053 -11.56301 -11.44936 -11.29832 -11.25966 -10.65332 -10.49692 -10.18536 -9.99835 -9.59654 -9.50796 -4.93074 0.01318 0.06125 0.15666 0.33545 0.44323 0.61158 0.66860 1.29796 1.59063 1.66401 1.95385 1.98304 2.45207 2.57036 2.74641 3.21192 3.36094 3.39048 3.54183 3.58739 3.63821 3.64787 3.71858 3.81882 3.92112 3.96442 4.09321 4.17143 4.20646 4.36637 4.39971 4.40674 4.47364 4.59030 4.68568 4.74362 4.76862 4.80448 4.83020 4.90476 4.98253 5.00990 5.04338 5.05304 5.22429 5.25119 5.32974 5.34240 5.39076 5.60877 5.80888 5.85052 5.85409 6.45103 6.47616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.078 4.078 3 Si 0.761 3.239 4 C -0.139 4.139 5 C -0.077 4.077 6 C -0.193 4.193 7 C 0.086 3.914 8 O -0.305 6.305 9 C 0.435 3.565 10 F -0.171 7.171 11 F -0.169 7.169 12 C 0.520 3.480 13 O -0.506 6.506 14 N -0.669 5.669 15 C 0.110 3.890 16 H 0.103 0.897 17 C -0.122 4.122 18 C -0.071 4.071 19 H 0.118 0.882 20 C -0.056 4.056 21 C -0.113 4.113 22 C -0.100 4.100 23 C -0.110 4.110 24 Br -0.065 7.065 25 C -0.100 4.100 26 C -0.112 4.112 27 C -0.141 4.141 28 C -0.136 4.136 29 C -0.058 4.058 30 H 0.386 0.614 31 H 0.130 0.870 32 H -0.282 1.282 33 H -0.301 1.301 34 H 0.154 0.846 35 H 0.143 0.857 36 H 0.424 0.576 37 H 0.110 0.890 38 H 0.093 0.907 39 H 0.150 0.850 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.151 0.849 43 H 0.074 0.926 44 H 0.107 0.893 45 H 0.144 0.856 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.358 3.449 -0.656 4.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.187 4.187 3 Si 0.666 3.334 4 C -0.139 4.139 5 C -0.095 4.095 6 C -0.211 4.211 7 C 0.043 3.957 8 O -0.222 6.222 9 C 0.357 3.643 10 F -0.153 7.153 11 F -0.150 7.150 12 C 0.298 3.702 13 O -0.379 6.379 14 N -0.322 5.322 15 C 0.006 3.994 16 H 0.121 0.879 17 C -0.160 4.160 18 C -0.089 4.089 19 H 0.136 0.864 20 C -0.056 4.056 21 C -0.132 4.132 22 C -0.120 4.120 23 C -0.190 4.190 24 Br 0.020 6.980 25 C -0.120 4.120 26 C -0.131 4.131 27 C -0.180 4.180 28 C -0.155 4.155 29 C -0.076 4.076 30 H 0.236 0.764 31 H 0.148 0.852 32 H -0.208 1.208 33 H -0.230 1.230 34 H 0.171 0.829 35 H 0.160 0.840 36 H 0.262 0.738 37 H 0.129 0.871 38 H 0.112 0.888 39 H 0.168 0.832 40 H 0.155 0.845 41 H 0.155 0.845 42 H 0.169 0.831 43 H 0.092 0.908 44 H 0.126 0.874 45 H 0.162 0.838 46 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.446 2.889 -0.739 3.857 hybrid contribution -0.988 0.511 -0.313 1.155 sum 1.458 3.400 -1.052 3.846 Atomic orbital electron populations 1.86578 1.18386 1.80312 1.50218 1.25178 0.83474 1.11593 0.98407 0.94159 0.90406 0.72211 0.76576 1.20422 1.00411 0.95282 0.97829 1.21027 0.95746 1.00337 0.92359 1.21607 1.04865 0.93206 1.01433 1.19240 0.97306 0.92466 0.86661 1.86643 1.63958 1.39321 1.32314 1.21757 0.76772 0.79425 0.86363 1.93199 1.78193 1.55443 1.88456 1.93202 1.50505 1.89777 1.81543 1.19364 0.80785 0.87110 0.82953 1.90862 1.53792 1.17281 1.75997 1.45423 1.48911 1.16996 1.20859 1.22169 0.97267 0.94641 0.85322 0.87939 1.23418 0.94115 1.02053 0.96372 1.21715 0.92583 0.99703 0.94907 0.86439 1.19977 0.95836 0.93582 0.96240 1.21270 0.98660 0.98288 0.94948 1.21307 0.94185 0.98251 0.98215 1.21993 0.98694 0.99166 0.99114 1.96759 1.53683 1.97755 1.49791 1.21326 0.99375 0.96032 0.95281 1.21356 0.94202 1.00072 0.97436 1.23605 0.94178 0.98609 1.01564 1.20703 0.99267 1.01672 0.93813 1.21048 0.97048 0.93785 0.95719 0.76430 0.85199 1.20834 1.22965 0.82880 0.83955 0.73761 0.87147 0.88849 0.83238 0.84513 0.84497 0.83115 0.90754 0.87447 0.83787 0.83279 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.65 12.77 -148.98 -1.90 -2.55 16 2 C -0.08 0.15 2.82 71.24 0.20 0.35 16 3 Si 0.76 -2.34 29.78 68.60 2.04 -0.30 16 4 C -0.14 0.08 5.39 -19.85 -0.11 -0.02 16 5 C -0.08 0.08 8.66 22.25 0.19 0.27 16 6 C -0.19 -0.36 8.26 22.37 0.18 -0.17 16 7 C 0.09 0.43 6.48 22.51 0.15 0.58 16 8 O -0.31 -2.18 9.60 -73.38 -0.70 -2.88 16 9 C 0.43 1.01 2.05 71.24 0.15 1.15 16 10 F -0.17 -0.13 15.29 44.97 0.69 0.56 16 11 F -0.17 -0.04 15.29 44.97 0.69 0.64 16 12 C 0.52 1.15 7.34 87.66 0.64 1.80 16 13 O -0.51 -4.96 16.10 16.00 0.26 -4.70 16 14 N -0.67 3.66 5.26 -440.04 -2.32 1.35 16 15 C 0.11 -0.73 4.32 45.51 0.20 -0.53 16 16 H 0.10 -0.34 7.46 -2.39 -0.02 -0.36 16 17 C -0.12 1.25 7.29 31.12 0.23 1.48 16 18 C -0.07 0.68 3.85 -11.01 -0.04 0.64 16 19 H 0.12 -1.45 8.09 -2.38 -0.02 -1.47 16 20 C -0.06 0.32 5.29 -19.86 -0.11 0.22 16 21 C -0.11 0.52 8.63 22.27 0.19 0.71 16 22 C -0.10 0.11 9.79 22.28 0.22 0.33 16 23 C -0.11 -0.11 6.22 22.31 0.14 0.03 16 24 Br -0.07 -0.17 33.70 -20.37 -0.69 -0.86 16 25 C -0.10 0.12 9.79 22.29 0.22 0.34 16 26 C -0.11 0.51 9.71 22.27 0.22 0.73 16 27 C -0.14 1.08 7.25 31.12 0.23 1.31 16 28 C -0.14 -0.42 9.99 22.36 0.22 -0.19 16 29 C -0.06 -0.04 9.60 22.25 0.21 0.18 16 30 H 0.39 -1.58 8.70 -74.06 -0.64 -2.23 16 31 H 0.13 -0.51 7.96 -2.39 -0.02 -0.53 16 32 H -0.28 -0.19 7.11 99.48 0.71 0.52 16 33 H -0.30 -1.45 7.11 99.48 0.71 -0.74 16 34 H 0.15 -0.86 4.87 -2.91 -0.01 -0.87 16 35 H 0.14 -0.04 5.10 -2.91 -0.01 -0.05 16 36 H 0.42 -4.66 8.70 -92.70 -0.81 -5.46 16 37 H 0.11 -1.17 7.73 -2.39 -0.02 -1.19 16 38 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 39 H 0.15 -1.28 6.65 -2.91 -0.02 -1.30 16 40 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 41 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 42 H 0.15 -1.36 8.05 -2.91 -0.02 -1.39 16 43 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 44 H 0.11 -0.91 6.31 -2.39 -0.02 -0.92 16 45 H 0.14 0.20 8.06 -2.91 -0.02 0.18 16 46 H 0.15 -0.27 8.06 -2.91 -0.02 -0.29 16 Total: 0.00 -19.09 412.90 1.07 -18.02 By element: Atomic # 1 Polarization: -18.14 SS G_CDS: -0.33 Total: -18.48 kcal Atomic # 6 Polarization: 5.87 SS G_CDS: 3.33 Total: 9.19 kcal Atomic # 7 Polarization: 3.66 SS G_CDS: -2.32 Total: 1.35 kcal Atomic # 8 Polarization: -7.79 SS G_CDS: -2.35 Total: -10.14 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 1.38 Total: 1.20 kcal Atomic # 14 Polarization: -2.34 SS G_CDS: 2.04 Total: -0.30 kcal Atomic # 35 Polarization: -0.17 SS G_CDS: -0.69 Total: -0.86 kcal Total: -19.09 1.07 -18.02 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.434 kcal (2) G-P(sol) polarization free energy of solvation -19.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.024 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.458 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds