Wall clock time and date at job start Sat Mar 6 2021 11:15:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.47120 * 2 1 4 4 C 1.50708 * 109.46788 * 119.99497 * 2 1 3 5 5 C 1.38237 * 119.97271 * 245.00211 * 4 2 1 6 6 C 1.38291 * 120.11320 * 179.97438 * 5 4 2 7 7 C 1.38126 * 120.05069 * 0.03711 * 6 5 4 8 8 C 1.38750 * 119.94730 * 359.97438 * 7 6 5 9 9 O 1.35904 * 120.05746 * 179.97438 * 8 7 6 10 10 C 1.42904 * 116.99766 * 0.02562 * 9 8 7 11 11 C 1.50693 * 109.46782 * 179.97438 * 10 9 8 12 12 O 1.21276 * 120.00556 * 359.97438 * 11 10 9 13 13 N 1.34780 * 119.99988 * 179.97438 * 11 10 9 14 14 C 1.46501 * 120.00395 * 180.02562 * 13 11 10 15 15 H 1.09001 * 112.84767 * 23.79977 * 14 13 11 16 16 C 1.53777 * 113.61602 * 155.00004 * 14 13 11 17 17 C 1.53776 * 87.08155 * 89.11718 * 16 14 13 18 18 H 1.09008 * 113.61721 * 270.79857 * 17 16 14 19 19 C 1.50694 * 113.61617 * 139.98385 * 17 16 14 20 20 C 1.38243 * 119.99434 * 121.52978 * 19 17 16 21 21 C 1.38215 * 120.01162 * 179.97438 * 20 19 17 22 22 C 1.38325 * 119.99189 * 359.97438 * 21 20 19 23 23 Br 1.89099 * 120.01408 * 179.72498 * 22 21 20 24 24 C 1.38334 * 119.97889 * 359.97438 * 22 21 20 25 25 C 1.38215 * 119.98653 * 0.02562 * 24 22 21 26 26 C 1.53777 * 87.17637 * 25.38977 * 17 16 14 27 27 C 1.38165 * 119.96994 * 65.30090 * 4 2 1 28 28 H 0.96697 * 114.00256 * 300.00370 * 1 2 3 29 29 H 1.08997 * 109.47424 * 239.99215 * 2 1 3 30 30 H 1.48497 * 109.99753 * 178.67863 * 3 2 1 31 31 H 1.48502 * 109.99845 * 299.99503 * 3 2 1 32 32 H 1.08001 * 119.94384 * 359.97438 * 5 4 2 33 33 H 1.08000 * 119.97608 * 180.02562 * 6 5 4 34 34 H 1.08002 * 120.02201 * 179.97438 * 7 6 5 35 35 H 1.09003 * 109.47093 * 59.99641 * 10 9 8 36 36 H 1.08997 * 109.46878 * 299.99521 * 10 9 8 37 37 H 0.97001 * 120.00075 * 359.97438 * 13 11 10 38 38 H 1.09001 * 113.61614 * 334.56746 * 16 14 13 39 39 H 1.09005 * 113.61267 * 203.66635 * 16 14 13 40 40 H 1.08001 * 119.99552 * 359.97438 * 20 19 17 41 41 H 1.07997 * 120.00734 * 180.02562 * 21 20 19 42 42 H 1.08001 * 120.00445 * 179.97438 * 24 22 21 43 43 H 1.08002 * 119.99084 * 179.97438 * 25 24 22 44 44 H 1.09001 * 113.61435 * 89.15429 * 26 17 16 45 45 H 1.09000 * 113.61764 * 220.06412 * 26 17 16 46 46 H 1.08007 * 120.03170 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6385 -0.0116 2.1910 6 6 3.1003 -0.6604 3.3216 7 6 2.8564 -2.0090 3.4934 8 6 2.1469 -2.7127 2.5308 9 8 1.9060 -4.0398 2.6972 10 6 2.4122 -4.6466 3.8879 11 6 2.0505 -6.1095 3.8989 12 8 1.4209 -6.5855 2.9781 13 7 2.4268 -6.8890 4.9320 14 6 2.0757 -8.3113 4.9425 15 1 1.8973 -8.7105 3.9441 16 6 3.0253 -9.1739 5.7903 17 6 2.0992 -8.8819 6.9827 18 1 2.3677 -7.9805 7.5337 19 6 1.8772 -10.0719 7.8803 20 6 2.2121 -9.9993 9.2196 21 6 2.0082 -11.0904 10.0432 22 6 1.4684 -12.2548 9.5275 23 35 1.1963 -13.7505 10.6521 24 6 1.1324 -12.3266 8.1875 25 6 1.3367 -11.2351 7.3646 26 6 0.9736 -8.6650 5.9576 27 6 1.6898 -2.0608 1.3949 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 3.5346 1.7703 0.0322 31 1 1.5616 2.4679 -1.2086 32 1 2.8308 1.0428 2.0582 33 1 3.6523 -0.1122 4.0708 34 1 3.2176 -2.5154 4.3764 35 1 1.9751 -4.1581 4.7588 36 1 3.4965 -4.5399 3.9174 37 1 2.9307 -6.5084 5.6684 38 1 4.0230 -8.7484 5.8979 39 1 3.0411 -10.2235 5.4965 40 1 2.6332 -9.0900 9.6223 41 1 2.2695 -11.0335 11.0896 42 1 0.7112 -13.2357 7.7843 43 1 1.0748 -11.2912 6.3183 44 1 0.4275 -9.5752 5.7097 45 1 0.3173 -7.8291 6.2000 46 1 1.1409 -2.6073 0.6422 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:15:52 Heat of formation + Delta-G solvation = -12.466499 kcal Electronic energy + Delta-G solvation = -29155.833935 eV Core-core repulsion = 24831.696160 eV Total energy + Delta-G solvation = -4324.137775 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.79090 -41.27704 -40.37349 -39.20803 -38.60036 -37.21950 -34.83686 -33.10869 -32.46715 -32.04468 -31.64791 -30.46982 -29.15290 -26.83618 -26.71367 -25.77205 -23.93496 -23.67261 -22.93630 -22.31130 -21.66171 -20.18726 -19.33343 -18.61717 -17.96195 -17.65300 -17.44551 -17.26367 -16.98889 -16.72483 -16.36463 -16.20988 -16.11111 -15.64772 -15.48378 -15.13909 -15.03079 -14.75006 -14.59998 -14.49436 -14.27556 -14.18764 -14.01461 -13.64290 -13.45612 -13.35240 -12.96175 -12.88966 -12.60538 -12.41001 -12.14500 -12.06481 -12.01639 -11.87039 -11.67881 -11.42628 -11.29123 -11.23748 -11.05006 -10.48854 -10.19460 -10.00952 -9.93555 -9.51383 -9.28280 -4.98858 0.05079 0.21066 0.32102 0.39330 0.65367 1.27766 1.39475 1.46895 1.66172 1.97894 2.55974 2.56941 2.67721 3.43526 3.47900 3.53853 3.64564 3.68085 3.68548 3.82845 3.85005 3.94575 3.95100 4.00358 4.08655 4.13546 4.20017 4.25456 4.34637 4.35790 4.41293 4.49415 4.61259 4.64626 4.71059 4.76734 4.82807 4.88737 4.98081 5.01013 5.04232 5.12063 5.23493 5.23830 5.24829 5.37431 5.45154 5.46343 5.63259 5.70452 5.83978 6.26872 6.45159 6.75038 7.10377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.087 4.087 3 Si 0.796 3.204 4 C -0.085 4.085 5 C -0.156 4.156 6 C -0.070 4.070 7 C -0.201 4.201 8 C 0.113 3.887 9 O -0.325 6.325 10 C 0.038 3.962 11 C 0.514 3.486 12 O -0.574 6.574 13 N -0.690 5.690 14 C 0.114 3.886 15 H 0.081 0.919 16 C -0.123 4.123 17 C -0.064 4.064 18 H 0.122 0.878 19 C -0.057 4.057 20 C -0.110 4.110 21 C -0.100 4.100 22 C -0.111 4.111 23 Br -0.064 7.064 24 C -0.101 4.101 25 C -0.116 4.116 26 C -0.144 4.144 27 C -0.152 4.152 28 H 0.396 0.604 29 H 0.099 0.901 30 H -0.281 1.281 31 H -0.302 1.302 32 H 0.151 0.849 33 H 0.165 0.835 34 H 0.162 0.838 35 H 0.128 0.872 36 H 0.126 0.874 37 H 0.422 0.578 38 H 0.094 0.906 39 H 0.099 0.901 40 H 0.155 0.845 41 H 0.139 0.861 42 H 0.135 0.865 43 H 0.144 0.856 44 H 0.094 0.906 45 H 0.071 0.929 46 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.911 5.475 8.011 10.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.195 4.195 3 Si 0.701 3.299 4 C -0.086 4.086 5 C -0.173 4.173 6 C -0.088 4.088 7 C -0.220 4.220 8 C 0.068 3.932 9 O -0.238 6.238 10 C -0.040 4.040 11 C 0.301 3.699 12 O -0.452 6.452 13 N -0.344 5.344 14 C 0.008 3.992 15 H 0.100 0.900 16 C -0.161 4.161 17 C -0.083 4.083 18 H 0.140 0.860 19 C -0.057 4.057 20 C -0.129 4.129 21 C -0.119 4.119 22 C -0.190 4.190 23 Br 0.021 6.979 24 C -0.120 4.120 25 C -0.134 4.134 26 C -0.182 4.182 27 C -0.171 4.171 28 H 0.246 0.754 29 H 0.116 0.884 30 H -0.207 1.207 31 H -0.230 1.230 32 H 0.169 0.831 33 H 0.182 0.818 34 H 0.180 0.820 35 H 0.146 0.854 36 H 0.144 0.856 37 H 0.261 0.739 38 H 0.112 0.888 39 H 0.117 0.883 40 H 0.172 0.828 41 H 0.157 0.843 42 H 0.153 0.847 43 H 0.162 0.838 44 H 0.113 0.887 45 H 0.090 0.910 46 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 4.820 4.693 6.696 9.492 hybrid contribution 0.020 -0.824 -0.337 0.891 sum 4.841 3.868 6.359 8.879 Atomic orbital electron populations 1.86481 1.17391 1.82319 1.50447 1.25436 0.85305 1.11903 0.96885 0.93568 0.77726 0.74056 0.84600 1.20201 0.98276 0.93016 0.97071 1.21218 1.00629 1.00600 0.94863 1.21359 0.96713 0.93540 0.97144 1.21645 1.03419 0.96387 1.00533 1.19191 0.96326 0.82307 0.95333 1.86126 1.74700 1.20875 1.42112 1.22736 1.02628 0.89954 0.88644 1.20579 0.78713 0.88649 0.81963 1.90772 1.40933 1.75884 1.37593 1.45319 1.57268 1.08828 1.23022 1.21901 0.97129 0.80601 0.99540 0.90049 1.23375 0.98542 1.00799 0.93379 1.21668 0.96934 0.96196 0.93461 0.85953 1.20028 0.96336 0.95140 0.94211 1.21370 0.99682 0.98934 0.92908 1.21345 0.97663 0.91726 1.01191 1.21991 1.07649 0.94212 0.95140 1.96756 1.96062 1.39579 1.65497 1.21290 0.99002 1.00073 0.91684 1.21242 0.99253 0.92256 1.00684 1.23597 0.96613 1.02678 0.95344 1.20305 1.04448 0.94670 0.97660 0.75442 0.88353 1.20731 1.23015 0.83148 0.81783 0.82013 0.85439 0.85602 0.73906 0.88762 0.88257 0.82773 0.84287 0.84672 0.83833 0.88720 0.91048 0.87279 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.77 12.84 -148.98 -1.91 -3.68 16 2 C -0.09 -0.15 2.80 71.24 0.20 0.05 16 3 Si 0.80 -1.80 29.80 68.60 2.04 0.24 16 4 C -0.09 -0.17 5.35 -19.88 -0.11 -0.27 16 5 C -0.16 0.47 8.67 22.28 0.19 0.66 16 6 C -0.07 0.37 10.04 22.26 0.22 0.60 16 7 C -0.20 0.74 9.04 22.37 0.20 0.94 16 8 C 0.11 0.43 6.69 22.51 0.15 0.58 16 9 O -0.32 -2.10 9.67 -73.43 -0.71 -2.81 16 10 C 0.04 -0.15 5.22 71.23 0.37 0.22 16 11 C 0.51 0.86 7.91 87.65 0.69 1.56 16 12 O -0.57 -8.19 16.10 16.02 0.26 -7.93 16 13 N -0.69 4.37 5.26 -439.76 -2.31 2.06 16 14 C 0.11 -0.48 4.33 45.58 0.20 -0.28 16 15 H 0.08 0.15 7.46 -2.39 -0.02 0.13 16 16 C -0.12 1.05 7.29 31.12 0.23 1.28 16 17 C -0.06 0.56 3.85 -11.02 -0.04 0.52 16 18 H 0.12 -1.56 8.09 -2.38 -0.02 -1.58 16 19 C -0.06 0.27 5.29 -19.86 -0.11 0.16 16 20 C -0.11 0.48 9.71 22.27 0.22 0.70 16 21 C -0.10 0.09 9.79 22.28 0.22 0.31 16 22 C -0.11 -0.19 6.22 22.31 0.14 -0.05 16 23 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.89 16 24 C -0.10 -0.02 9.79 22.29 0.22 0.20 16 25 C -0.12 0.32 8.54 22.27 0.19 0.51 16 26 C -0.14 0.75 7.27 31.18 0.23 0.98 16 27 C -0.15 -0.99 9.63 22.37 0.22 -0.78 16 28 H 0.40 -2.24 8.70 -74.06 -0.64 -2.88 16 29 H 0.10 0.41 7.96 -2.39 -0.02 0.39 16 30 H -0.28 -0.45 7.11 99.48 0.71 0.26 16 31 H -0.30 -1.68 7.11 99.48 0.71 -0.98 16 32 H 0.15 -1.20 4.90 -2.91 -0.01 -1.22 16 33 H 0.16 -1.94 8.06 -2.91 -0.02 -1.97 16 34 H 0.16 -1.78 6.30 -2.91 -0.02 -1.80 16 35 H 0.13 -1.40 7.66 -2.39 -0.02 -1.41 16 36 H 0.13 -1.34 7.66 -2.39 -0.02 -1.36 16 37 H 0.42 -6.10 8.70 -92.71 -0.81 -6.91 16 38 H 0.09 -1.03 8.14 -2.39 -0.02 -1.05 16 39 H 0.10 -0.76 7.65 -2.38 -0.02 -0.78 16 40 H 0.15 -1.47 8.05 -2.91 -0.02 -1.49 16 41 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 42 H 0.14 -0.16 8.06 -2.91 -0.02 -0.19 16 43 H 0.14 -0.82 6.73 -2.91 -0.02 -0.84 16 44 H 0.09 -0.44 6.39 -2.39 -0.02 -0.45 16 45 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 46 H 0.11 1.13 8.06 -2.91 -0.02 1.11 16 Total: 0.00 -28.79 403.76 -0.06 -28.85 By element: Atomic # 1 Polarization: -23.35 SS G_CDS: -0.37 Total: -23.72 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: 3.63 Total: 7.87 kcal Atomic # 7 Polarization: 4.37 SS G_CDS: -2.31 Total: 2.06 kcal Atomic # 8 Polarization: -12.06 SS G_CDS: -2.36 Total: -14.42 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: 2.04 Total: 0.24 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.89 kcal Total: -28.79 -0.06 -28.85 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.388 kcal (2) G-P(sol) polarization free energy of solvation -28.791 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds