Wall clock time and date at job start Sat Mar 6 2021 11:15:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35983 * 117.00345 * 2 1 4 4 C 1.38672 * 119.99883 * 180.02562 * 3 2 1 5 5 C 1.38158 * 119.99459 * 179.74188 * 4 3 2 6 6 C 1.50698 * 120.00162 * 180.24872 * 5 4 3 7 7 O 1.42901 * 109.47449 * 255.26369 * 6 5 4 8 8 Si 1.86299 * 109.46984 * 15.26248 * 6 5 4 9 9 C 1.38681 * 119.99888 * 0.51041 * 5 4 3 10 10 O 1.35983 * 119.99613 * 179.74185 * 9 5 4 11 11 C 1.42906 * 116.99545 * 179.72879 * 10 9 5 12 12 C 1.50706 * 109.46702 * 179.97438 * 11 10 9 13 13 O 1.21279 * 120.00072 * 359.97438 * 12 11 10 14 14 N 1.34777 * 119.99762 * 179.97438 * 12 11 10 15 15 C 1.46496 * 120.00258 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84832 * 25.33456 * 15 14 12 17 17 C 1.53777 * 113.61861 * 156.53091 * 15 14 12 18 18 C 1.53780 * 87.08203 * 89.11535 * 17 15 14 19 19 H 1.08998 * 113.61808 * 270.88871 * 18 17 15 20 20 C 1.50706 * 113.61370 * 140.06422 * 18 17 15 21 21 C 1.38240 * 119.98755 * 299.72748 * 20 18 17 22 22 C 1.38220 * 120.00905 * 179.76414 * 21 20 18 23 23 C 1.38326 * 119.98454 * 0.51096 * 22 21 20 24 24 Br 1.89108 * 120.00821 * 179.76449 * 23 22 21 25 25 C 1.38329 * 119.98261 * 359.74700 * 23 22 21 26 26 C 1.38216 * 119.98882 * 359.97438 * 25 23 22 27 27 C 1.53775 * 113.61719 * 254.14386 * 15 14 12 28 28 C 1.38715 * 120.00197 * 359.46591 * 9 5 4 29 29 C 1.38109 * 119.99703 * 0.28017 * 28 9 5 30 30 H 1.08999 * 109.46953 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47014 * 299.99842 * 1 2 3 32 32 H 1.09002 * 109.46992 * 60.00483 * 1 2 3 33 33 H 1.07993 * 120.00443 * 359.97438 * 4 3 2 34 34 H 1.08999 * 109.47003 * 135.25911 * 6 5 4 35 35 H 0.96703 * 113.99764 * 180.02562 * 7 6 5 36 36 H 1.48506 * 109.99976 * 299.99905 * 8 6 5 37 37 H 1.48506 * 110.00185 * 61.31492 * 8 6 5 38 38 H 1.09000 * 109.46890 * 59.99959 * 11 10 9 39 39 H 1.09000 * 109.47141 * 299.99602 * 11 10 9 40 40 H 0.96999 * 120.00047 * 0.02562 * 14 12 11 41 41 H 1.08996 * 113.62004 * 203.66850 * 17 15 14 42 42 H 1.09004 * 113.61075 * 334.48862 * 17 15 14 43 43 H 1.08000 * 119.99710 * 0.02562 * 21 20 18 44 44 H 1.07999 * 120.01206 * 180.24035 * 22 21 20 45 45 H 1.08001 * 120.00378 * 179.97438 * 25 23 22 46 46 H 1.08000 * 119.99438 * 180.02562 * 26 25 23 47 47 H 1.08999 * 113.61562 * 25.42357 * 27 15 14 48 48 H 1.09003 * 113.61852 * 156.33503 * 27 15 14 49 49 H 1.07993 * 120.00180 * 180.24964 * 28 9 5 50 50 H 1.08003 * 119.99984 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2840 -0.0005 5 6 4.0585 2.5150 -0.0059 6 6 5.5634 2.5940 -0.0122 7 8 6.0264 2.9642 1.2880 8 14 6.2704 0.9332 -0.4735 9 6 3.3032 3.6781 -0.0001 10 8 3.9206 4.8897 -0.0001 11 6 3.0806 6.0458 0.0000 12 6 3.9349 7.2873 0.0007 13 8 5.1439 7.1915 0.0014 14 7 3.3553 8.5041 0.0004 15 6 4.1856 9.7110 0.0015 16 1 5.1739 9.5453 -0.4273 17 6 3.4706 10.9513 -0.5600 18 6 2.9823 11.2215 0.8729 19 1 2.0355 10.7364 1.1103 20 6 3.0044 12.6795 1.2534 21 6 4.1969 13.3787 1.2412 22 6 4.2170 14.7172 1.5854 23 6 3.0453 15.3543 1.9523 24 35 3.0731 17.1839 2.4298 25 6 1.8532 14.6529 1.9695 26 6 1.8332 13.3159 1.6196 27 6 4.2162 10.4364 1.3571 28 6 1.9179 3.6056 -0.0001 29 6 1.2909 2.3750 0.0000 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 4.0194 0.3783 -0.0005 34 1 5.8850 3.3402 -0.7386 35 1 6.9884 3.0346 1.3577 36 1 5.8390 -0.0932 0.5092 37 1 5.8219 0.5512 -1.8367 38 1 2.4514 6.0376 0.8901 39 1 2.4513 6.0378 -0.8899 40 1 2.3883 8.5807 0.0001 41 1 4.1513 11.7130 -0.9403 42 1 2.6683 10.7138 -1.2586 43 1 5.1123 12.8801 0.9586 44 1 5.1480 15.2645 1.5722 45 1 0.9382 15.1499 2.2563 46 1 0.9024 12.7683 1.6326 47 1 4.0145 9.7836 2.2063 48 1 5.1004 11.0577 1.5001 49 1 1.3298 4.5113 0.0004 50 1 0.2124 2.3185 -0.0004 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:15:57 Heat of formation + Delta-G solvation = -42.695640 kcal Electronic energy + Delta-G solvation = -34008.014925 eV Core-core repulsion = 29208.346505 eV Total energy + Delta-G solvation = -4799.668420 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -41.91379 -41.53238 -40.59590 -39.88726 -38.83958 -38.04748 -37.02254 -34.80248 -33.12471 -32.98431 -32.03872 -31.20041 -30.45096 -29.28492 -28.05841 -26.70268 -26.63353 -25.82725 -24.06983 -23.72491 -22.45744 -22.37637 -21.85588 -20.19152 -19.47122 -18.75757 -18.54804 -18.43936 -18.02980 -17.50823 -17.38520 -16.98178 -16.73018 -16.47769 -16.17207 -16.06097 -15.66078 -15.63052 -15.55138 -15.33793 -15.06527 -14.85025 -14.55530 -14.48437 -14.25215 -14.09834 -13.98173 -13.78468 -13.59878 -13.44279 -13.40698 -13.17397 -12.91613 -12.61884 -12.56380 -12.40423 -12.05937 -12.05208 -11.87234 -11.78811 -11.51275 -11.41948 -11.28648 -11.21738 -11.00858 -10.30697 -10.23298 -10.16298 -10.00455 -9.50903 -8.91399 -4.99696 -0.07918 0.05643 0.23495 0.32521 0.65732 1.25831 1.43108 1.44298 1.59527 1.91094 2.21230 2.41856 2.55575 2.56721 3.39287 3.44714 3.48992 3.60505 3.65544 3.69918 3.79266 3.83419 3.94146 3.95126 3.95596 3.98482 4.04852 4.08621 4.15668 4.20857 4.30723 4.33668 4.34003 4.36188 4.42000 4.56791 4.63679 4.67948 4.71551 4.78381 4.84335 4.89275 4.89797 5.02059 5.02294 5.05274 5.08141 5.13596 5.24072 5.24558 5.30803 5.48142 5.64504 5.84405 6.10487 6.31418 6.45913 6.87163 7.13118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.342 6.342 3 C 0.085 3.915 4 C -0.143 4.143 5 C -0.091 4.091 6 C -0.073 4.073 7 O -0.560 6.560 8 Si 0.778 3.222 9 C 0.105 3.895 10 O -0.304 6.304 11 C 0.033 3.967 12 C 0.517 3.483 13 O -0.566 6.566 14 N -0.692 5.692 15 C 0.116 3.884 16 H 0.084 0.916 17 C -0.122 4.122 18 C -0.066 4.066 19 H 0.120 0.880 20 C -0.057 4.057 21 C -0.115 4.115 22 C -0.100 4.100 23 C -0.110 4.110 24 Br -0.064 7.064 25 C -0.100 4.100 26 C -0.111 4.111 27 C -0.145 4.145 28 C -0.159 4.159 29 C -0.156 4.156 30 H 0.114 0.886 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.124 0.876 34 H 0.076 0.924 35 H 0.399 0.601 36 H -0.288 1.288 37 H -0.287 1.287 38 H 0.122 0.878 39 H 0.127 0.873 40 H 0.421 0.579 41 H 0.100 0.900 42 H 0.093 0.907 43 H 0.145 0.855 44 H 0.136 0.864 45 H 0.139 0.861 46 H 0.153 0.847 47 H 0.068 0.932 48 H 0.096 0.904 49 H 0.175 0.825 50 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.138 1.062 -2.106 6.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.040 3.960 4 C -0.161 4.161 5 C -0.091 4.091 6 C -0.182 4.182 7 O -0.369 6.369 8 Si 0.683 3.317 9 C 0.060 3.940 10 O -0.217 6.217 11 C -0.045 4.045 12 C 0.303 3.697 13 O -0.443 6.443 14 N -0.346 5.346 15 C 0.011 3.989 16 H 0.102 0.898 17 C -0.160 4.160 18 C -0.084 4.084 19 H 0.138 0.862 20 C -0.057 4.057 21 C -0.134 4.134 22 C -0.120 4.120 23 C -0.190 4.190 24 Br 0.021 6.979 25 C -0.120 4.120 26 C -0.130 4.130 27 C -0.183 4.183 28 C -0.177 4.177 29 C -0.174 4.174 30 H 0.133 0.867 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.141 0.859 34 H 0.094 0.906 35 H 0.249 0.751 36 H -0.216 1.216 37 H -0.214 1.214 38 H 0.140 0.860 39 H 0.144 0.856 40 H 0.259 0.741 41 H 0.118 0.882 42 H 0.112 0.888 43 H 0.163 0.837 44 H 0.154 0.846 45 H 0.156 0.844 46 H 0.171 0.829 47 H 0.087 0.913 48 H 0.114 0.886 49 H 0.193 0.807 50 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -5.784 0.731 -2.035 6.175 hybrid contribution -1.011 0.256 0.094 1.047 sum -6.794 0.987 -1.941 7.135 Atomic orbital electron populations 1.23392 0.75956 1.05721 1.02667 1.86072 1.23882 1.26594 1.89100 1.18932 0.91630 0.85661 0.99759 1.20135 0.92993 0.96701 1.06312 1.18698 0.94991 0.90460 1.04999 1.24716 0.92284 1.11973 0.89201 1.86439 1.28995 1.92775 1.28712 0.94398 0.88815 0.72506 0.75981 1.18743 0.91494 0.84574 0.99197 1.86184 1.35048 1.11586 1.88907 1.22772 0.92831 0.82185 1.06743 1.20436 0.88308 0.85318 0.75619 1.90766 1.16648 1.87251 1.49669 1.45324 1.11114 1.03561 1.74640 1.21842 0.95513 0.83882 0.97693 0.89821 1.23359 1.00947 0.95749 0.95929 1.21717 0.99900 0.90181 0.96578 0.86185 1.20027 0.92941 0.96024 0.96722 1.21254 0.99098 0.93205 0.99819 1.21296 0.97126 0.95508 0.98060 1.21987 0.97511 0.91333 1.08141 1.96756 1.99281 1.10039 1.91835 1.21338 0.96758 0.95123 0.98737 1.21358 0.99270 0.93693 0.98670 1.23622 0.98777 0.98606 0.97310 1.21478 0.92048 1.00139 1.04082 1.21437 1.01705 0.90612 1.03691 0.86738 0.91215 0.91079 0.85851 0.90611 0.75075 1.21594 1.21421 0.86034 0.85576 0.74069 0.88156 0.88796 0.83697 0.84600 0.84358 0.82913 0.91296 0.88572 0.80741 0.81528 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.28 10.50 -93.36 -0.98 -3.26 16 3 C 0.09 0.62 6.69 22.49 0.15 0.77 16 4 C -0.14 -1.51 8.59 22.35 0.19 -1.32 16 5 C -0.09 -0.90 5.30 -19.78 -0.10 -1.01 16 6 C -0.07 -0.52 2.36 71.24 0.17 -0.35 16 7 O -0.56 -4.35 12.86 -148.98 -1.92 -6.27 16 8 Si 0.78 2.69 30.21 68.60 2.07 4.76 16 9 C 0.11 0.69 6.66 22.49 0.15 0.84 16 10 O -0.30 -2.13 9.00 -74.33 -0.67 -2.80 16 11 C 0.03 -0.11 5.22 71.24 0.37 0.26 16 12 C 0.52 0.73 7.91 87.66 0.69 1.43 16 13 O -0.57 -7.37 16.12 16.01 0.26 -7.11 16 14 N -0.69 4.42 5.26 -440.06 -2.32 2.10 16 15 C 0.12 -0.53 4.29 45.52 0.20 -0.34 16 16 H 0.08 0.07 7.50 -2.39 -0.02 0.05 16 17 C -0.12 1.08 7.29 31.12 0.23 1.30 16 18 C -0.07 0.56 3.87 -10.92 -0.04 0.52 16 19 H 0.12 -1.46 8.09 -2.39 -0.02 -1.48 16 20 C -0.06 0.26 5.29 -19.86 -0.11 0.15 16 21 C -0.12 0.33 8.63 22.27 0.19 0.52 16 22 C -0.10 0.00 9.79 22.29 0.22 0.21 16 23 C -0.11 -0.19 6.22 22.31 0.14 -0.05 16 24 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.89 16 25 C -0.10 0.07 9.79 22.29 0.22 0.29 16 26 C -0.11 0.46 9.71 22.26 0.22 0.67 16 27 C -0.14 0.75 7.27 31.21 0.23 0.98 16 28 C -0.16 0.03 9.03 22.35 0.20 0.23 16 29 C -0.16 -0.12 9.03 22.35 0.20 0.08 16 30 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 31 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 32 H 0.07 -0.45 7.66 -2.39 -0.02 -0.46 16 33 H 0.12 1.44 4.90 -2.91 -0.01 1.43 16 34 H 0.08 0.50 7.82 -2.39 -0.02 0.49 16 35 H 0.40 -0.92 8.74 -74.05 -0.65 -1.57 16 36 H -0.29 -2.78 6.74 99.48 0.67 -2.11 16 37 H -0.29 -2.46 7.11 99.48 0.71 -1.75 16 38 H 0.12 -1.13 7.66 -2.39 -0.02 -1.15 16 39 H 0.13 -1.31 7.66 -2.39 -0.02 -1.33 16 40 H 0.42 -5.94 8.70 -92.71 -0.81 -6.75 16 41 H 0.10 -0.82 7.73 -2.39 -0.02 -0.83 16 42 H 0.09 -1.05 8.14 -2.38 -0.02 -1.06 16 43 H 0.15 -0.87 6.65 -2.91 -0.02 -0.89 16 44 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 45 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 46 H 0.15 -1.38 8.05 -2.91 -0.02 -1.41 16 47 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 48 H 0.10 -0.47 6.31 -2.39 -0.02 -0.49 16 49 H 0.18 -1.60 6.29 -2.91 -0.02 -1.62 16 50 H 0.17 -1.01 6.29 -2.91 -0.02 -1.03 16 Total: 0.00 -31.10 432.52 -0.05 -31.16 By element: Atomic # 1 Polarization: -23.52 SS G_CDS: -0.44 Total: -23.96 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: 4.62 Total: 6.27 kcal Atomic # 7 Polarization: 4.42 SS G_CDS: -2.32 Total: 2.10 kcal Atomic # 8 Polarization: -16.13 SS G_CDS: -3.31 Total: -19.44 kcal Atomic # 14 Polarization: 2.69 SS G_CDS: 2.07 Total: 4.76 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.89 kcal Total: -31.10 -0.05 -31.16 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.540 kcal (2) G-P(sol) polarization free energy of solvation -31.103 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds