Wall clock time and date at job start Sat Mar 6 2021 11:16:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35992 * 117.00044 * 2 1 4 4 C 1.39158 * 120.07380 * 180.02562 * 3 2 1 5 5 O 1.35990 * 120.07173 * 359.96524 * 4 3 2 6 6 C 1.42901 * 117.00083 * 180.02562 * 5 4 3 7 7 C 1.50696 * 109.47092 * 180.02562 * 6 5 4 8 8 O 1.21282 * 120.00315 * 0.02562 * 7 6 5 9 9 N 1.34782 * 120.00026 * 180.02562 * 7 6 5 10 10 C 1.46494 * 120.00052 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.84988 * 23.80616 * 10 9 7 12 12 C 1.53785 * 113.61486 * 155.00325 * 10 9 7 13 13 C 1.53779 * 87.08347 * 89.11644 * 12 10 9 14 14 H 1.09001 * 113.61260 * 270.80565 * 13 12 10 15 15 C 1.50692 * 113.61532 * 139.98153 * 13 12 10 16 16 C 1.38243 * 119.99125 * 299.72409 * 15 13 12 17 17 C 1.38220 * 120.01059 * 179.76170 * 16 15 13 18 18 C 1.38327 * 119.98577 * 0.51853 * 17 16 15 19 19 Br 1.89102 * 120.00590 * 179.76432 * 18 17 16 20 20 C 1.38328 * 119.98266 * 359.73768 * 18 17 16 21 21 C 1.38212 * 119.98732 * 359.97438 * 20 18 17 22 22 C 1.53781 * 87.07994 * 25.43376 * 13 12 10 23 23 C 1.38566 * 119.85189 * 179.97438 * 4 3 2 24 24 C 1.38242 * 120.00253 * 359.97438 * 23 4 3 25 25 C 1.38249 * 120.14424 * 0.02620 * 24 23 4 26 26 C 1.50693 * 119.92305 * 179.97438 * 25 24 23 27 27 O 1.42907 * 109.47661 * 119.99735 * 26 25 24 28 28 Si 1.86298 * 109.47618 * 359.97438 * 26 25 24 29 29 C 1.38238 * 120.14735 * 0.22609 * 25 24 23 30 30 H 1.09000 * 109.47227 * 300.01021 * 1 2 3 31 31 H 1.09000 * 109.46933 * 60.00512 * 1 2 3 32 32 H 1.08997 * 109.47269 * 180.02562 * 1 2 3 33 33 H 1.09000 * 109.47121 * 300.00471 * 6 5 4 34 34 H 1.08997 * 109.47081 * 60.00510 * 6 5 4 35 35 H 0.97001 * 119.99615 * 0.02562 * 9 7 6 36 36 H 1.08994 * 113.61469 * 203.67040 * 12 10 9 37 37 H 1.08999 * 113.60977 * 334.56612 * 12 10 9 38 38 H 1.08000 * 119.99349 * 0.02562 * 16 15 13 39 39 H 1.07994 * 120.00430 * 180.27636 * 17 16 15 40 40 H 1.07999 * 120.00080 * 180.02562 * 20 18 17 41 41 H 1.08004 * 119.99033 * 179.97438 * 21 20 18 42 42 H 1.08998 * 113.61791 * 220.01987 * 22 13 12 43 43 H 1.08997 * 113.61389 * 89.11764 * 22 13 12 44 44 H 1.08007 * 119.99707 * 180.02562 * 23 4 3 45 45 H 1.07996 * 119.92316 * 180.02562 * 24 23 4 46 46 H 1.09000 * 109.46936 * 239.99359 * 26 25 24 47 47 H 0.96697 * 114.00527 * 179.97438 * 27 26 25 48 48 H 1.48506 * 109.99834 * 298.68714 * 28 26 25 49 49 H 1.48502 * 110.00011 * 59.99978 * 28 26 25 50 50 H 1.08008 * 119.99836 * 179.74773 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0004 6 6 5.6003 0.3006 -0.0004 7 6 6.2518 -1.0582 -0.0008 8 8 5.5669 -2.0592 -0.0015 9 7 7.5957 -1.1613 -0.0003 10 6 8.2290 -2.4822 -0.0002 11 1 7.5835 -3.2612 -0.4059 12 6 9.6471 -2.4856 -0.5951 13 6 10.1580 -2.1817 0.8231 14 1 10.2154 -1.1166 1.0476 15 6 11.4190 -2.9243 1.1826 16 6 11.4298 -4.3067 1.1853 17 6 12.5876 -4.9883 1.5102 18 6 13.7325 -4.2869 1.8430 19 35 15.3148 -5.2189 2.2941 20 6 13.7196 -2.9037 1.8453 21 6 12.5631 -2.2231 1.5146 22 6 8.8770 -2.8546 1.3438 23 6 4.0603 2.5234 -0.0011 24 6 3.3029 3.6799 -0.0016 25 6 1.9224 3.6057 -0.0011 26 6 1.1017 4.8696 -0.0011 27 8 0.2769 4.9021 -1.1676 28 14 2.2365 6.3471 -0.0011 29 6 1.2933 2.3748 0.0047 30 1 -0.3634 0.5140 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 5.9066 0.8503 -0.8904 34 1 5.9065 0.8504 0.8896 35 1 8.1434 -0.3607 0.0006 36 1 9.9599 -3.4590 -0.9727 37 1 9.8244 -1.6781 -1.3055 38 1 10.5348 -4.8542 0.9294 39 1 12.5972 -6.0682 1.5079 40 1 14.6135 -2.3558 2.1048 41 1 12.5529 -1.1431 1.5168 42 1 8.4327 -2.3451 2.1988 43 1 8.9794 -3.9290 1.4964 44 1 5.1386 2.5840 -0.0019 45 1 3.7908 4.6433 -0.0024 46 1 0.4732 4.8946 0.8891 47 1 -0.2804 5.6895 -1.2335 48 1 3.0772 6.3418 1.2231 49 1 3.0992 6.3249 -1.2096 50 1 0.2146 2.3197 0.0093 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:13 Heat of formation + Delta-G solvation = -42.883343 kcal Electronic energy + Delta-G solvation = -33739.789180 eV Core-core repulsion = 28940.112620 eV Total energy + Delta-G solvation = -4799.676560 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.97481 -41.58272 -40.57060 -39.54417 -38.93250 -38.61785 -37.04234 -34.85644 -33.12827 -32.21610 -32.05351 -31.60871 -30.56646 -29.45148 -28.49777 -26.73588 -26.28224 -25.76725 -24.01974 -23.69177 -22.68206 -22.36712 -21.86088 -20.23443 -19.82865 -18.65436 -18.42248 -18.24654 -17.98485 -17.59970 -17.48117 -17.00701 -16.69640 -16.53540 -16.29361 -16.14267 -15.88810 -15.63950 -15.56578 -15.45422 -15.12267 -14.74822 -14.52829 -14.44683 -14.27270 -14.21228 -14.03373 -13.72182 -13.58752 -13.47790 -13.43683 -12.94491 -12.81843 -12.45483 -12.41286 -12.32846 -12.25658 -12.11884 -12.08282 -11.88314 -11.83714 -11.44130 -11.30392 -11.25334 -11.08357 -10.32425 -10.21560 -10.02484 -9.89282 -9.52918 -9.02793 -4.89993 0.03609 0.04299 0.10763 0.30594 0.63939 1.32244 1.36734 1.37818 1.68250 1.99002 2.21842 2.40457 2.47446 2.54552 3.35803 3.41526 3.44085 3.62529 3.62899 3.66961 3.71627 3.81015 3.84073 3.91815 3.92433 3.93551 4.02623 4.10619 4.16194 4.17968 4.27562 4.29299 4.34134 4.39723 4.46743 4.49583 4.60018 4.64194 4.69350 4.75126 4.80930 4.85449 4.86908 4.93019 4.99041 5.02631 5.09987 5.22014 5.22296 5.23183 5.42054 5.45417 5.61568 5.82333 5.86388 6.33574 6.44328 6.91517 7.07614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.332 6.332 3 C 0.084 3.916 4 C 0.085 3.915 5 O -0.310 6.310 6 C 0.033 3.967 7 C 0.517 3.483 8 O -0.569 6.569 9 N -0.691 5.691 10 C 0.114 3.886 11 H 0.082 0.918 12 C -0.122 4.122 13 C -0.065 4.065 14 H 0.121 0.879 15 C -0.057 4.057 16 C -0.116 4.116 17 C -0.100 4.100 18 C -0.110 4.110 19 Br -0.064 7.064 20 C -0.099 4.099 21 C -0.111 4.111 22 C -0.144 4.144 23 C -0.159 4.159 24 C -0.134 4.134 25 C -0.085 4.085 26 C -0.081 4.081 27 O -0.565 6.565 28 Si 0.777 3.223 29 C -0.148 4.148 30 H 0.068 0.932 31 H 0.064 0.936 32 H 0.114 0.886 33 H 0.125 0.875 34 H 0.127 0.873 35 H 0.422 0.578 36 H 0.100 0.900 37 H 0.093 0.907 38 H 0.145 0.855 39 H 0.136 0.864 40 H 0.139 0.861 41 H 0.154 0.846 42 H 0.070 0.930 43 H 0.096 0.904 44 H 0.173 0.827 45 H 0.132 0.868 46 H 0.094 0.906 47 H 0.404 0.596 48 H -0.282 1.282 49 H -0.293 1.293 50 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.423 9.377 0.328 9.392 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.246 6.246 3 C 0.039 3.961 4 C 0.039 3.961 5 O -0.223 6.223 6 C -0.045 4.045 7 C 0.303 3.697 8 O -0.447 6.447 9 N -0.345 5.345 10 C 0.008 3.992 11 H 0.101 0.899 12 C -0.160 4.160 13 C -0.083 4.083 14 H 0.139 0.861 15 C -0.057 4.057 16 C -0.134 4.134 17 C -0.120 4.120 18 C -0.190 4.190 19 Br 0.022 6.978 20 C -0.119 4.119 21 C -0.130 4.130 22 C -0.182 4.182 23 C -0.178 4.178 24 C -0.152 4.152 25 C -0.085 4.085 26 C -0.190 4.190 27 O -0.375 6.375 28 Si 0.682 3.318 29 C -0.166 4.166 30 H 0.087 0.913 31 H 0.083 0.917 32 H 0.132 0.868 33 H 0.143 0.857 34 H 0.144 0.856 35 H 0.260 0.740 36 H 0.119 0.881 37 H 0.112 0.888 38 H 0.162 0.838 39 H 0.154 0.846 40 H 0.157 0.843 41 H 0.171 0.829 42 H 0.089 0.911 43 H 0.115 0.885 44 H 0.190 0.810 45 H 0.150 0.850 46 H 0.112 0.888 47 H 0.255 0.745 48 H -0.210 1.210 49 H -0.221 1.221 50 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 0.794 7.623 0.393 7.674 hybrid contribution -0.154 -0.358 0.097 0.402 sum 0.640 7.265 0.490 7.309 Atomic orbital electron populations 1.23346 0.76458 1.05486 1.02314 1.86195 1.23346 1.26156 1.88884 1.18649 0.89764 0.85813 1.01915 1.18484 0.88410 0.86229 1.02948 1.86223 1.18216 1.28610 1.89288 1.22785 0.79386 0.95457 1.06883 1.20461 0.83064 0.90604 0.75587 1.90777 1.64080 1.40040 1.49826 1.45312 1.04902 1.09729 1.74534 1.21873 0.94261 0.85141 0.97900 0.89949 1.23374 0.92113 1.04448 0.96101 1.21664 0.89786 1.00337 0.96525 0.86089 1.20016 0.95366 0.93539 0.96800 1.21251 0.98003 0.94330 0.99843 1.21292 0.91682 1.00839 0.98170 1.21988 0.93120 0.95526 1.08324 1.96755 1.32381 1.76239 1.92458 1.21340 0.99940 0.91969 0.98658 1.21360 0.91476 1.01371 0.98746 1.23574 0.95313 1.02117 0.97231 1.21264 1.02038 0.89435 1.05029 1.20797 0.93217 0.98248 1.02929 1.19493 0.93432 0.94505 1.01102 1.24883 1.00370 1.02162 0.91598 1.86442 1.59277 1.49565 1.42235 0.94281 0.78699 0.82213 0.76597 1.21064 1.00962 0.90073 1.04550 0.91325 0.91739 0.86771 0.85746 0.85588 0.73982 0.88148 0.88843 0.83779 0.84599 0.84289 0.82882 0.91148 0.88530 0.80974 0.85050 0.88837 0.74502 1.20952 1.22097 0.83025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.33 -4.03 10.28 -79.60 -0.82 -4.85 16 3 C 0.08 0.88 6.70 22.57 0.15 1.03 16 4 C 0.08 0.73 6.70 22.57 0.15 0.88 16 5 O -0.31 -3.22 9.45 -67.03 -0.63 -3.85 16 6 C 0.03 -0.03 5.22 71.23 0.37 0.34 16 7 C 0.52 2.05 7.91 87.65 0.69 2.74 16 8 O -0.57 -9.29 16.10 16.00 0.26 -9.03 16 9 N -0.69 3.07 5.26 -440.03 -2.32 0.75 16 10 C 0.11 -0.32 4.32 45.52 0.20 -0.13 16 11 H 0.08 0.25 7.46 -2.39 -0.02 0.23 16 12 C -0.12 0.90 7.29 31.12 0.23 1.13 16 13 C -0.06 0.49 3.86 -11.02 -0.04 0.45 16 14 H 0.12 -1.37 8.09 -2.39 -0.02 -1.39 16 15 C -0.06 0.21 5.29 -19.86 -0.11 0.11 16 16 C -0.12 0.24 8.62 22.27 0.19 0.43 16 17 C -0.10 -0.07 9.79 22.29 0.22 0.15 16 18 C -0.11 -0.25 6.22 22.31 0.14 -0.11 16 19 Br -0.06 -0.23 33.70 -20.37 -0.69 -0.91 16 20 C -0.10 0.02 9.79 22.28 0.22 0.24 16 21 C -0.11 0.38 9.71 22.26 0.22 0.60 16 22 C -0.14 0.59 7.25 31.12 0.23 0.82 16 23 C -0.16 -0.40 9.04 22.35 0.20 -0.20 16 24 C -0.13 -0.51 8.66 22.27 0.19 -0.32 16 25 C -0.08 -0.41 5.42 -19.86 -0.11 -0.51 16 26 C -0.08 0.11 2.81 71.23 0.20 0.31 16 27 O -0.57 0.59 12.75 -148.98 -1.90 -1.31 16 28 Si 0.78 -3.04 29.78 68.60 2.04 -0.99 16 29 C -0.15 -0.95 8.60 22.35 0.19 -0.76 16 30 H 0.07 -0.03 7.65 -2.39 -0.02 -0.05 16 31 H 0.06 0.05 7.67 -2.39 -0.02 0.03 16 32 H 0.11 -0.04 8.14 -2.39 -0.02 -0.06 16 33 H 0.12 -0.92 7.66 -2.39 -0.02 -0.94 16 34 H 0.13 -0.98 7.66 -2.39 -0.02 -1.00 16 35 H 0.42 -5.24 8.70 -92.71 -0.81 -6.05 16 36 H 0.10 -0.68 7.73 -2.39 -0.02 -0.69 16 37 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 38 H 0.14 -0.72 6.64 -2.91 -0.02 -0.74 16 39 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 40 H 0.14 -0.31 8.06 -2.91 -0.02 -0.34 16 41 H 0.15 -1.29 8.05 -2.91 -0.02 -1.31 16 42 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 43 H 0.10 -0.37 6.29 -2.39 -0.02 -0.39 16 44 H 0.17 -1.01 6.30 -2.91 -0.02 -1.03 16 45 H 0.13 0.17 4.87 -2.91 -0.01 0.15 16 46 H 0.09 -0.50 7.96 -2.39 -0.02 -0.52 16 47 H 0.40 -4.74 8.74 -74.06 -0.65 -5.38 16 48 H -0.28 -0.18 7.11 99.48 0.71 0.53 16 49 H -0.29 -0.94 7.11 99.48 0.71 -0.24 16 50 H 0.15 0.47 6.30 -2.91 -0.02 0.45 16 Total: 0.00 -31.98 432.90 0.19 -31.79 By element: Atomic # 1 Polarization: -19.56 SS G_CDS: -0.40 Total: -19.96 kcal Atomic # 6 Polarization: 3.71 SS G_CDS: 4.64 Total: 8.36 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -2.32 Total: 0.75 kcal Atomic # 8 Polarization: -15.95 SS G_CDS: -3.09 Total: -19.04 kcal Atomic # 14 Polarization: -3.04 SS G_CDS: 2.04 Total: -0.99 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.69 Total: -0.91 kcal Total: -31.98 0.19 -31.79 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.090 kcal (2) G-P(sol) polarization free energy of solvation -31.983 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.793 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds