Wall clock time and date at job start Sat Mar 6 2021 11:16:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38238 * 119.94258 * 119.72187 * 4 2 1 6 6 C 1.38236 * 120.04671 * 179.76852 * 5 4 2 7 7 Br 1.89096 * 120.03807 * 180.25270 * 6 5 4 8 8 C 1.38796 * 119.92599 * 0.51316 * 6 5 4 9 9 O 1.35913 * 120.05726 * 179.72335 * 8 6 5 10 10 C 1.42903 * 116.99636 * 180.02562 * 9 8 6 11 11 C 1.50701 * 109.46838 * 179.97438 * 10 9 8 12 12 O 1.21283 * 120.00383 * 0.02562 * 11 10 9 13 13 N 1.34784 * 120.00071 * 180.02562 * 11 10 9 14 14 C 1.46489 * 120.00270 * 180.02562 * 13 11 10 15 15 H 1.09004 * 112.85236 * 23.80070 * 14 13 11 16 16 C 1.53779 * 113.61915 * 154.99738 * 14 13 11 17 17 C 1.53773 * 87.08322 * 89.11352 * 16 14 13 18 18 H 1.09001 * 113.61691 * 270.80103 * 17 16 14 19 19 C 1.50697 * 113.61724 * 139.98244 * 17 16 14 20 20 C 1.38246 * 119.98971 * 299.73066 * 19 17 16 21 21 C 1.38217 * 120.00755 * 179.72262 * 20 19 17 22 22 C 1.38327 * 119.99141 * 0.55023 * 21 20 19 23 23 Br 1.89096 * 120.01086 * 179.70610 * 22 21 20 24 24 C 1.38325 * 119.97850 * 359.72076 * 22 21 20 25 25 C 1.38215 * 119.99217 * 0.02562 * 24 22 21 26 26 C 1.53779 * 113.61665 * 252.49404 * 14 13 11 27 27 C 1.38718 * 119.88182 * 359.74330 * 8 6 5 28 28 C 1.38147 * 119.95523 * 359.97438 * 27 8 6 29 29 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 30 30 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 31 31 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 32 32 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 33 33 H 1.08006 * 119.97875 * 0.02869 * 5 4 2 34 34 H 1.08998 * 109.46971 * 299.99536 * 10 9 8 35 35 H 1.09000 * 109.47178 * 60.00326 * 10 9 8 36 36 H 0.96998 * 119.99717 * 359.97438 * 13 11 10 37 37 H 1.08999 * 113.61714 * 203.66730 * 16 14 13 38 38 H 1.09007 * 113.61161 * 334.56226 * 16 14 13 39 39 H 1.08000 * 119.99235 * 359.97438 * 20 19 17 40 40 H 1.08007 * 120.00470 * 180.29477 * 21 20 19 41 41 H 1.08005 * 120.00192 * 180.02562 * 24 22 21 42 42 H 1.07997 * 119.99807 * 179.97438 * 25 24 22 43 43 H 1.09007 * 113.61348 * 25.43280 * 26 14 13 44 44 H 1.09001 * 113.62149 * 156.33259 * 26 14 13 45 45 H 1.08001 * 120.02298 * 180.02562 * 27 8 6 46 46 H 1.07999 * 119.96359 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7212 -0.0358 -2.1426 6 6 3.1872 -0.6867 -3.2696 7 35 4.2736 0.2343 -4.5134 8 6 2.8522 -2.0155 -3.4899 9 8 3.3042 -2.6564 -4.5999 10 6 2.9194 -4.0231 -4.7618 11 6 3.5088 -4.5630 -6.0393 12 8 4.1916 -3.8480 -6.7418 13 7 3.2772 -5.8405 -6.4013 14 6 3.8506 -6.3655 -7.6429 15 1 4.7374 -5.8189 -7.9639 16 6 4.0360 -7.8921 -7.6387 17 6 2.6060 -7.9884 -8.1957 18 1 1.8391 -8.0430 -7.4230 19 6 2.4419 -9.0442 -9.2585 20 6 3.1790 -8.9700 -10.4258 21 6 3.0330 -9.9413 -11.3983 22 6 2.1410 -10.9813 -11.2085 23 35 1.9347 -12.3058 -12.5422 24 6 1.3996 -11.0520 -10.0428 25 6 1.5500 -10.0832 -9.0685 26 6 2.8148 -6.5733 -8.7603 27 6 2.0549 -2.6880 -2.5754 28 6 1.5968 -2.0345 -1.4478 29 1 -0.3932 0.4418 0.7651 30 1 1.7924 -0.5139 0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5881 2.4585 1.2242 33 1 2.9780 0.9994 -1.9724 34 1 3.2861 -4.6063 -3.9171 35 1 1.8324 -4.0917 -4.8062 36 1 2.7314 -6.4124 -5.8393 37 1 4.7998 -8.2411 -8.3336 38 1 4.1453 -8.3159 -6.6403 39 1 3.8718 -8.1553 -10.5759 40 1 3.6123 -9.8859 -12.3081 41 1 0.7033 -11.8641 -9.8940 42 1 0.9710 -10.1381 -8.1586 43 1 1.9379 -5.9324 -8.6676 44 1 3.2446 -6.5618 -9.7619 45 1 1.7932 -3.7222 -2.7444 46 1 0.9758 -2.5579 -0.7359 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:19 Heat of formation + Delta-G solvation = -2.596516 kcal Electronic energy + Delta-G solvation = -31295.874590 eV Core-core repulsion = 26632.346807 eV Total energy + Delta-G solvation = -4663.527784 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 495.972 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.81462 -41.36292 -40.37645 -39.26229 -38.61714 -37.38512 -34.80033 -33.52685 -33.07349 -32.22791 -32.03582 -30.71199 -30.28644 -29.35125 -26.69615 -26.41726 -25.74727 -24.14659 -23.80991 -22.54626 -22.24281 -21.80864 -20.18679 -19.50982 -18.65083 -18.45277 -17.90979 -17.48179 -17.22440 -16.96861 -16.74142 -16.42393 -16.14430 -16.00895 -15.73925 -15.55283 -15.18771 -15.10967 -14.66154 -14.51977 -14.48278 -14.26199 -14.20857 -13.99400 -13.91318 -13.73338 -13.45478 -13.42347 -12.91186 -12.53242 -12.40583 -12.29676 -12.14112 -12.04717 -11.92649 -11.84899 -11.77697 -11.41218 -11.28713 -11.21686 -11.20367 -11.00825 -10.50630 -10.15510 -10.00390 -9.98740 -9.50757 -9.28999 -4.95866 -0.01892 0.05706 0.09064 0.32561 0.63705 0.65733 1.27298 1.39837 1.44875 1.55261 1.92616 2.38360 2.49935 2.56742 3.31150 3.45693 3.48219 3.65818 3.69292 3.69699 3.79769 3.83687 3.85249 3.95304 3.96464 4.05590 4.08576 4.10016 4.21326 4.34394 4.36240 4.41182 4.42140 4.64072 4.66830 4.71689 4.78687 4.80749 4.85277 4.90258 5.02785 5.04586 5.05511 5.14187 5.24121 5.24750 5.31945 5.45140 5.49901 5.65043 5.84566 6.06816 6.45872 6.60098 7.15048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.064 4.064 3 Si 0.728 3.272 4 C -0.114 4.114 5 C -0.058 4.058 6 C -0.141 4.141 7 Br -0.048 7.048 8 C 0.150 3.850 9 O -0.304 6.304 10 C 0.033 3.967 11 C 0.515 3.485 12 O -0.567 6.567 13 N -0.691 5.691 14 C 0.116 3.884 15 H 0.082 0.918 16 C -0.123 4.123 17 C -0.065 4.065 18 H 0.122 0.878 19 C -0.056 4.056 20 C -0.116 4.116 21 C -0.101 4.101 22 C -0.111 4.111 23 Br -0.065 7.065 24 C -0.100 4.100 25 C -0.111 4.111 26 C -0.145 4.145 27 C -0.194 4.194 28 C -0.034 4.034 29 H 0.397 0.603 30 H 0.109 0.891 31 H -0.304 1.304 32 H -0.278 1.278 33 H 0.144 0.856 34 H 0.133 0.867 35 H 0.128 0.872 36 H 0.422 0.578 37 H 0.098 0.902 38 H 0.094 0.906 39 H 0.144 0.856 40 H 0.135 0.865 41 H 0.139 0.861 42 H 0.154 0.846 43 H 0.070 0.930 44 H 0.094 0.906 45 H 0.176 0.824 46 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.163 -5.396 8.269 10.108 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.175 4.175 3 Si 0.635 3.365 4 C -0.115 4.115 5 C -0.077 4.077 6 C -0.221 4.221 7 Br 0.037 6.963 8 C 0.102 3.898 9 O -0.216 6.216 10 C -0.045 4.045 11 C 0.301 3.699 12 O -0.444 6.444 13 N -0.346 5.346 14 C 0.010 3.990 15 H 0.101 0.899 16 C -0.160 4.160 17 C -0.083 4.083 18 H 0.140 0.860 19 C -0.057 4.057 20 C -0.134 4.134 21 C -0.120 4.120 22 C -0.190 4.190 23 Br 0.021 6.979 24 C -0.119 4.119 25 C -0.129 4.129 26 C -0.183 4.183 27 C -0.213 4.213 28 C -0.052 4.052 29 H 0.248 0.752 30 H 0.127 0.873 31 H -0.232 1.232 32 H -0.205 1.205 33 H 0.161 0.839 34 H 0.151 0.849 35 H 0.146 0.854 36 H 0.260 0.740 37 H 0.117 0.883 38 H 0.113 0.887 39 H 0.162 0.838 40 H 0.153 0.847 41 H 0.157 0.843 42 H 0.172 0.828 43 H 0.088 0.912 44 H 0.113 0.887 45 H 0.193 0.807 46 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -1.325 -4.443 6.094 7.657 hybrid contribution -1.524 -0.090 0.686 1.674 sum -2.850 -4.534 6.780 8.640 Atomic orbital electron populations 1.86528 1.18117 1.80482 1.51330 1.24631 0.84208 1.10188 0.98432 0.94465 0.91103 0.74103 0.76838 1.19348 1.00270 0.95286 0.96632 1.20856 0.96070 0.99585 0.91169 1.21087 1.07807 0.94102 0.99057 1.96760 1.66331 1.75366 1.57866 1.18773 0.93615 0.90576 0.86872 1.86240 1.70237 1.25769 1.39375 1.22849 1.02889 0.81445 0.97303 1.20491 0.80184 0.82392 0.86817 1.90794 1.39793 1.58654 1.55187 1.45308 1.53519 1.11279 1.24466 1.21832 0.96904 0.95591 0.84632 0.89930 1.23368 0.96361 0.92939 1.03379 1.21674 0.98843 0.91618 0.96198 0.86000 1.20037 0.94966 0.95641 0.95046 1.21253 1.00209 0.98810 0.93173 1.21292 0.97142 0.93208 1.00405 1.21986 1.03648 0.97353 0.96023 1.96755 1.97370 1.52077 1.51718 1.21344 0.98494 0.99950 0.92161 1.21368 0.98519 0.93431 0.99615 1.23576 0.99677 0.96036 0.99058 1.21617 1.01616 1.02699 0.95369 1.21229 0.94853 0.93017 0.96131 0.75211 0.87315 1.23152 1.20459 0.83928 0.84920 0.85398 0.73973 0.88318 0.88725 0.83792 0.84674 0.84324 0.82807 0.91169 0.88731 0.80653 0.82472 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.70 12.74 -148.98 -1.90 -1.20 16 2 C -0.06 0.21 2.81 71.24 0.20 0.41 16 3 Si 0.73 -1.18 29.78 68.60 2.04 0.86 16 4 C -0.11 0.02 5.42 -19.85 -0.11 -0.09 16 5 C -0.06 -0.16 8.40 22.27 0.19 0.02 16 6 C -0.14 -0.81 6.24 22.40 0.14 -0.67 16 7 Br -0.05 -0.43 33.16 -20.37 -0.68 -1.11 16 8 C 0.15 0.40 6.68 22.52 0.15 0.55 16 9 O -0.30 -1.35 9.01 -73.53 -0.66 -2.01 16 10 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 11 C 0.51 0.20 7.91 87.66 0.69 0.89 16 12 O -0.57 -7.23 16.10 16.00 0.26 -6.98 16 13 N -0.69 4.94 5.26 -440.05 -2.32 2.62 16 14 C 0.12 -0.55 4.32 45.52 0.20 -0.35 16 15 H 0.08 0.09 7.46 -2.38 -0.02 0.08 16 16 C -0.12 1.09 7.29 31.12 0.23 1.32 16 17 C -0.07 0.58 3.86 -11.02 -0.04 0.53 16 18 H 0.12 -1.55 8.09 -2.39 -0.02 -1.57 16 19 C -0.06 0.26 5.29 -19.86 -0.11 0.16 16 20 C -0.12 0.32 8.62 22.27 0.19 0.51 16 21 C -0.10 -0.02 9.79 22.29 0.22 0.19 16 22 C -0.11 -0.20 6.22 22.31 0.14 -0.06 16 23 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.89 16 24 C -0.10 0.08 9.79 22.28 0.22 0.30 16 25 C -0.11 0.47 9.71 22.27 0.22 0.69 16 26 C -0.14 0.78 7.25 31.12 0.23 1.01 16 27 C -0.19 0.79 9.04 22.36 0.20 0.99 16 28 C -0.03 0.11 9.60 22.26 0.21 0.32 16 29 H 0.40 -3.52 8.74 -74.05 -0.65 -4.17 16 30 H 0.11 -0.94 7.96 -2.38 -0.02 -0.96 16 31 H -0.30 -2.16 7.11 99.48 0.71 -1.45 16 32 H -0.28 -0.50 7.11 99.48 0.71 0.21 16 33 H 0.14 0.18 4.87 -2.91 -0.01 0.16 16 34 H 0.13 -1.71 7.66 -2.39 -0.02 -1.73 16 35 H 0.13 -1.54 7.66 -2.39 -0.02 -1.56 16 36 H 0.42 -6.38 8.70 -92.71 -0.81 -7.18 16 37 H 0.10 -0.78 7.73 -2.39 -0.02 -0.80 16 38 H 0.09 -1.07 8.14 -2.38 -0.02 -1.09 16 39 H 0.14 -0.82 6.64 -2.91 -0.02 -0.84 16 40 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 41 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 42 H 0.15 -1.44 8.05 -2.91 -0.02 -1.47 16 43 H 0.07 -0.26 8.14 -2.38 -0.02 -0.27 16 44 H 0.09 -0.45 6.29 -2.39 -0.02 -0.47 16 45 H 0.18 -2.15 6.30 -2.91 -0.02 -2.17 16 46 H 0.16 -1.18 8.06 -2.91 -0.02 -1.20 16 Total: 0.00 -28.11 424.07 -0.75 -28.86 By element: Atomic # 1 Polarization: -26.72 SS G_CDS: -0.35 Total: -27.07 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: 3.54 Total: 6.92 kcal Atomic # 7 Polarization: 4.94 SS G_CDS: -2.32 Total: 2.62 kcal Atomic # 8 Polarization: -7.89 SS G_CDS: -2.30 Total: -10.19 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: 2.04 Total: 0.86 kcal Atomic # 35 Polarization: -0.64 SS G_CDS: -1.36 Total: -2.00 kcal Total: -28.11 -0.75 -28.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.264 kcal (2) G-P(sol) polarization free energy of solvation -28.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.844 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.861 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds