Wall clock time and date at job start Sat Mar 6 2021 11:16:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.46902 * 110.99454 * 2 1 4 4 C 1.50699 * 109.47469 * 293.94859 * 3 2 1 5 5 O 1.21288 * 119.99502 * 0.02562 * 4 3 2 6 6 N 1.34773 * 120.00345 * 180.02562 * 4 3 2 7 7 C 1.46500 * 120.00179 * 180.02562 * 6 4 3 8 8 H 1.08996 * 112.85014 * 336.19678 * 7 6 4 9 9 C 1.53776 * 113.61351 * 107.50421 * 7 6 4 10 10 C 1.53782 * 87.08295 * 89.11570 * 9 7 6 11 11 H 1.08997 * 113.68901 * 270.86990 * 10 9 7 12 12 C 1.50703 * 113.61190 * 139.97790 * 10 9 7 13 13 C 1.38235 * 119.99141 * 322.22699 * 12 10 9 14 14 C 1.38227 * 120.00583 * 179.76739 * 13 12 10 15 15 C 1.38317 * 119.99116 * 0.51094 * 14 13 12 16 16 Br 1.89100 * 120.01243 * 179.76529 * 15 14 13 17 17 C 1.38334 * 119.97956 * 359.74283 * 15 14 13 18 18 C 1.38212 * 119.99009 * 0.02562 * 17 15 14 19 19 C 1.53778 * 87.07819 * 25.43394 * 10 9 7 20 20 C 1.39666 * 111.00030 * 123.95186 * 2 1 3 21 21 C 1.38891 * 120.07634 * 116.05215 * 20 2 1 22 22 C 1.50699 * 120.03613 * 359.97378 * 21 20 2 23 23 O 1.42904 * 109.47205 * 75.02254 * 22 21 20 24 24 Si 1.86300 * 109.47430 * 195.02553 * 22 21 20 25 25 C 1.38126 * 119.92656 * 180.02562 * 21 20 2 26 26 C 1.38260 * 120.07465 * 359.97438 * 25 21 20 27 27 C 1.50699 * 119.92283 * 180.02562 * 26 25 21 28 28 F 1.39898 * 109.47217 * 179.97438 * 27 26 25 29 29 F 1.39898 * 109.47255 * 299.97796 * 27 26 25 30 30 F 1.39898 * 109.47336 * 59.98105 * 27 26 25 31 31 C 1.38308 * 120.15116 * 359.97438 * 26 25 21 32 32 C 1.38081 * 120.07401 * 0.30268 * 31 26 25 33 33 H 1.08996 * 109.47745 * 296.04492 * 1 2 3 34 34 H 1.08998 * 109.47349 * 56.05217 * 1 2 3 35 35 H 1.09004 * 109.47178 * 176.04218 * 1 2 3 36 36 H 1.08994 * 109.47522 * 53.95791 * 3 2 1 37 37 H 1.09006 * 109.46819 * 173.95248 * 3 2 1 38 38 H 0.97003 * 119.99840 * 0.02562 * 6 4 3 39 39 H 1.08997 * 113.61537 * 203.66334 * 9 7 6 40 40 H 1.08996 * 113.61800 * 334.56666 * 9 7 6 41 41 H 1.08000 * 119.99982 * 0.02562 * 13 12 10 42 42 H 1.07999 * 119.99916 * 180.23110 * 14 13 12 43 43 H 1.07997 * 120.00485 * 179.97438 * 17 15 14 44 44 H 1.08001 * 119.99611 * 180.02562 * 18 17 15 45 45 H 1.09006 * 113.61028 * 220.02280 * 19 10 9 46 46 H 1.08997 * 113.69702 * 89.13110 * 19 10 9 47 47 H 1.09009 * 109.47127 * 315.02589 * 22 21 20 48 48 H 0.96696 * 114.00111 * 300.00399 * 23 22 21 49 49 H 1.48499 * 109.99744 * 298.68065 * 24 22 21 50 50 H 1.48502 * 110.00021 * 60.00012 * 24 22 21 51 51 H 1.08002 * 119.95771 * 180.02562 * 25 21 20 52 52 H 1.08002 * 119.95989 * 180.02562 * 31 26 25 53 53 H 1.07998 * 120.04003 * 179.72841 * 32 31 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6369 2.0472 -1.2985 5 8 1.0047 1.4455 -2.1408 6 7 2.0187 3.3199 -1.5237 7 6 1.6698 3.9769 -2.7858 8 1 1.4877 3.2697 -3.5949 9 6 0.5740 5.0461 -2.6413 10 6 1.7030 6.0536 -2.3673 11 1 1.9725 6.1337 -1.3142 12 6 1.4866 7.3948 -3.0196 13 6 0.9236 7.4673 -4.2801 14 6 0.7205 8.6976 -4.8767 15 6 1.0905 9.8555 -4.2168 16 35 0.8191 11.5385 -5.0352 17 6 1.6587 9.7821 -2.9577 18 6 1.8570 8.5518 -2.3598 19 6 2.6243 5.1198 -3.1698 20 6 1.9695 -0.7282 1.0816 21 6 2.7118 -1.8812 0.8606 22 6 2.9779 -2.3488 -0.5470 23 8 3.9742 -1.5170 -1.1450 24 14 3.5796 -4.1116 -0.5126 25 6 3.2048 -2.5993 1.9326 26 6 2.9607 -2.1713 3.2244 27 6 3.5008 -2.9570 4.3914 28 9 3.1276 -2.3329 5.5866 29 9 2.9799 -4.2551 4.3607 30 9 4.8963 -3.0125 4.3104 31 6 2.2229 -1.0230 3.4480 32 6 1.7221 -0.3035 2.3811 33 1 -0.3634 0.4512 0.9232 34 1 -0.3634 0.5739 -0.8525 35 1 -0.3634 -1.0252 -0.0709 36 1 1.5610 1.9274 0.8309 37 1 3.0796 1.3445 0.1083 38 1 2.5246 3.8009 -0.8502 39 1 0.0296 5.2410 -3.5652 40 1 -0.0838 4.8845 -1.7873 41 1 0.6385 6.5630 -4.7970 42 1 0.2772 8.7543 -5.8598 43 1 1.9481 10.6859 -2.4422 44 1 2.3002 8.4944 -1.3766 45 1 3.6219 5.0177 -2.7424 46 1 2.6416 5.3339 -4.2384 47 1 2.0582 -2.2901 -1.1294 48 1 3.7280 -0.5833 -1.1962 49 1 4.8499 -4.1997 0.2515 50 1 2.5524 -4.9870 0.1070 51 1 3.7824 -3.4957 1.7614 52 1 2.0344 -0.6912 4.4584 53 1 1.1423 0.5906 2.5565 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:23 Heat of formation + Delta-G solvation = -103.989785 kcal Electronic energy + Delta-G solvation = -42275.622420 eV Core-core repulsion = 36325.797395 eV Total energy + Delta-G solvation = -5949.825026 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 499.076 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -51.37577 -48.88587 -48.85389 -41.92435 -41.41500 -40.34477 -38.96172 -37.62907 -37.55874 -34.67577 -33.13902 -33.01693 -32.21956 -32.02916 -30.49360 -29.27365 -27.73494 -27.02533 -26.66169 -25.90210 -25.07569 -23.92509 -23.51555 -22.46334 -22.13732 -21.55216 -20.09076 -19.70317 -19.66729 -19.61130 -18.63962 -18.21208 -17.98114 -17.55685 -17.04826 -16.99504 -16.57012 -16.41257 -16.19946 -16.07013 -15.94570 -15.78617 -15.74591 -15.48909 -15.27746 -15.22248 -15.05056 -15.02196 -14.99887 -14.81858 -14.73715 -14.59999 -14.46868 -14.28714 -14.07124 -13.94273 -13.75051 -13.52128 -13.41134 -13.33737 -13.03098 -12.88185 -12.81565 -12.64043 -12.39160 -12.31577 -12.00956 -11.83193 -11.45848 -11.38776 -11.28253 -11.18100 -11.07559 -10.87919 -10.35647 -10.19890 -10.04910 -9.98648 -9.69081 -9.49964 -4.89807 -0.48803 -0.11749 0.06261 0.32761 0.66106 1.30969 1.42913 1.57134 1.61896 1.85183 1.88649 2.07319 2.48103 2.57311 2.66981 2.78742 3.18018 3.41241 3.46012 3.49700 3.62989 3.67828 3.75933 3.81020 3.85171 3.95379 3.95692 3.96520 4.00020 4.03695 4.15978 4.22745 4.26514 4.35640 4.36624 4.41910 4.43632 4.46209 4.53870 4.68567 4.72376 4.81240 4.81714 4.85865 4.89851 4.92210 4.98776 5.04790 5.06255 5.08511 5.18713 5.24563 5.26538 5.27194 5.53449 5.56312 5.69877 5.84974 6.02023 6.57930 6.60127 7.29531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.502 5.502 3 C 0.035 3.965 4 C 0.518 3.482 5 O -0.557 6.557 6 N -0.701 5.701 7 C 0.121 3.879 8 H 0.085 0.915 9 C -0.142 4.142 10 C -0.067 4.067 11 H 0.118 0.882 12 C -0.056 4.056 13 C -0.115 4.115 14 C -0.100 4.100 15 C -0.111 4.111 16 Br -0.065 7.065 17 C -0.100 4.100 18 C -0.113 4.113 19 C -0.127 4.127 20 C 0.136 3.864 21 C -0.098 4.098 22 C -0.069 4.069 23 O -0.540 6.540 24 Si 0.787 3.213 25 C -0.082 4.082 26 C -0.187 4.187 27 C 0.507 3.493 28 F -0.172 7.172 29 F -0.184 7.184 30 F -0.182 7.182 31 C -0.054 4.054 32 C -0.134 4.134 33 H 0.049 0.951 34 H 0.084 0.916 35 H 0.065 0.935 36 H 0.102 0.898 37 H 0.126 0.874 38 H 0.416 0.584 39 H 0.094 0.906 40 H 0.070 0.930 41 H 0.146 0.854 42 H 0.136 0.864 43 H 0.138 0.862 44 H 0.152 0.848 45 H 0.088 0.912 46 H 0.097 0.903 47 H 0.089 0.911 48 H 0.371 0.629 49 H -0.285 1.285 50 H -0.267 1.267 51 H 0.123 0.877 52 H 0.162 0.838 53 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.648 4.153 1.131 4.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.223 5.223 3 C -0.093 4.093 4 C 0.305 3.695 5 O -0.434 6.434 6 N -0.354 5.354 7 C 0.015 3.985 8 H 0.104 0.896 9 C -0.180 4.180 10 C -0.085 4.085 11 H 0.136 0.864 12 C -0.057 4.057 13 C -0.133 4.133 14 C -0.120 4.120 15 C -0.190 4.190 16 Br 0.020 6.980 17 C -0.120 4.120 18 C -0.131 4.131 19 C -0.165 4.165 20 C 0.042 3.958 21 C -0.099 4.099 22 C -0.178 4.178 23 O -0.346 6.346 24 Si 0.690 3.310 25 C -0.101 4.101 26 C -0.188 4.188 27 C 0.453 3.547 28 F -0.153 7.153 29 F -0.165 7.165 30 F -0.164 7.164 31 C -0.072 4.072 32 C -0.153 4.153 33 H 0.067 0.933 34 H 0.102 0.898 35 H 0.084 0.916 36 H 0.119 0.881 37 H 0.144 0.856 38 H 0.254 0.746 39 H 0.112 0.888 40 H 0.089 0.911 41 H 0.164 0.836 42 H 0.154 0.846 43 H 0.156 0.844 44 H 0.170 0.830 45 H 0.107 0.893 46 H 0.115 0.885 47 H 0.107 0.893 48 H 0.220 0.780 49 H -0.212 1.212 50 H -0.193 1.193 51 H 0.141 0.859 52 H 0.179 0.821 53 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -0.539 2.882 0.235 2.941 hybrid contribution -0.526 1.428 2.060 2.562 sum -1.064 4.310 2.295 4.998 Atomic orbital electron populations 1.22597 0.83887 1.03297 1.02309 1.59153 1.10101 1.13262 1.39816 1.22210 1.03645 0.87885 0.95608 1.20633 0.78620 0.81527 0.88723 1.90732 1.40374 1.64869 1.47434 1.45516 1.57368 1.13036 1.19447 1.21752 0.96361 0.93497 0.86884 0.89641 1.23542 0.96529 0.94819 1.03133 1.21666 0.97386 0.89046 1.00381 0.86414 1.20056 0.96136 0.95439 0.94048 1.21251 0.99204 0.97476 0.95397 1.21299 0.98926 0.91351 1.00421 1.21981 1.07455 0.91531 0.98044 1.96756 1.96089 1.23854 1.81251 1.21333 0.97695 0.99728 0.93237 1.21360 0.99815 0.90872 1.01068 1.23373 0.98486 0.93010 1.01596 1.18811 0.94325 0.93070 0.89561 1.20306 0.98223 0.95417 0.95995 1.25147 0.97242 1.06272 0.89170 1.86686 1.42839 1.22917 1.82167 0.92355 0.77348 0.73116 0.88208 1.20732 0.98321 0.99362 0.91666 1.19972 1.06843 1.00096 0.91928 1.18402 0.75562 0.77777 0.83005 1.93180 1.91142 1.82097 1.48882 1.93219 1.86586 1.40034 1.96649 1.93224 1.30408 1.96359 1.96375 1.21192 0.92896 0.91298 1.01849 1.21974 1.00402 1.01641 0.91331 0.93297 0.89753 0.91573 0.88077 0.85649 0.74642 0.88811 0.91100 0.83633 0.84606 0.84446 0.83033 0.89291 0.88489 0.89314 0.78024 1.21239 1.19293 0.85918 0.82053 0.81541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.02 127.69 1.15 1.07 16 2 N -0.50 2.03 3.19 -724.43 -2.31 -0.28 16 3 C 0.04 -0.33 4.91 85.56 0.42 0.09 16 4 C 0.52 -2.42 7.52 87.66 0.66 -1.76 16 5 O -0.56 -2.56 13.93 -3.05 -0.04 -2.60 16 6 N -0.70 6.65 5.26 -440.05 -2.32 4.34 16 7 C 0.12 -0.85 4.32 45.52 0.20 -0.65 16 8 H 0.09 -0.16 7.46 -2.39 -0.02 -0.17 16 9 C -0.14 1.07 7.25 31.12 0.23 1.29 16 10 C -0.07 0.64 3.86 -11.01 -0.04 0.60 16 11 H 0.12 -1.52 8.09 -2.39 -0.02 -1.54 16 12 C -0.06 0.30 5.29 -19.86 -0.11 0.19 16 13 C -0.11 0.42 8.60 22.27 0.19 0.61 16 14 C -0.10 0.05 9.79 22.29 0.22 0.27 16 15 C -0.11 -0.15 6.22 22.31 0.14 -0.01 16 16 Br -0.06 -0.18 33.70 -20.37 -0.69 -0.87 16 17 C -0.10 0.10 9.79 22.29 0.22 0.32 16 18 C -0.11 0.50 9.71 22.27 0.22 0.72 16 19 C -0.13 1.21 7.29 31.12 0.23 1.44 16 20 C 0.14 -0.37 4.62 38.22 0.18 -0.19 16 21 C -0.10 -0.17 5.28 -19.73 -0.10 -0.27 16 22 C -0.07 -0.13 2.30 71.24 0.16 0.03 16 23 O -0.54 -1.60 12.65 -148.98 -1.89 -3.48 16 24 Si 0.79 1.51 30.41 68.60 2.09 3.60 16 25 C -0.08 -0.33 8.20 22.25 0.18 -0.15 16 26 C -0.19 -0.42 5.37 -19.84 -0.11 -0.52 16 27 C 0.51 2.33 3.31 71.24 0.24 2.56 16 28 F -0.17 -0.56 15.97 44.97 0.72 0.16 16 29 F -0.18 -1.29 17.24 44.97 0.78 -0.52 16 30 F -0.18 -1.27 17.23 44.97 0.78 -0.50 16 31 C -0.05 0.17 9.42 22.25 0.21 0.38 16 32 C -0.13 0.80 8.66 22.40 0.19 0.99 16 33 H 0.05 -0.34 7.33 -2.39 -0.02 -0.36 16 34 H 0.08 0.03 5.82 -2.39 -0.01 0.02 16 35 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 36 H 0.10 -1.45 7.49 -2.39 -0.02 -1.47 16 37 H 0.13 -1.51 8.06 -2.38 -0.02 -1.53 16 38 H 0.42 -6.43 8.70 -92.71 -0.81 -7.24 16 39 H 0.09 -0.64 6.32 -2.39 -0.02 -0.66 16 40 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 41 H 0.15 -1.01 6.67 -2.91 -0.02 -1.03 16 42 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 43 H 0.14 -0.39 8.06 -2.91 -0.02 -0.42 16 44 H 0.15 -1.40 8.05 -2.91 -0.02 -1.42 16 45 H 0.09 -0.98 8.14 -2.38 -0.02 -1.00 16 46 H 0.10 -0.82 7.72 -2.39 -0.02 -0.84 16 47 H 0.09 0.12 7.78 -2.38 -0.02 0.10 16 48 H 0.37 -0.23 8.39 -74.06 -0.62 -0.86 16 49 H -0.29 -2.15 6.81 99.48 0.68 -1.47 16 50 H -0.27 -1.36 7.11 99.48 0.71 -0.65 16 51 H 0.12 0.73 4.94 -2.91 -0.01 0.71 16 52 H 0.16 -1.11 7.15 -2.91 -0.02 -1.13 16 53 H 0.17 -1.99 7.14 -2.91 -0.02 -2.01 16 Total: 0.00 -18.36 461.90 1.37 -16.98 By element: Atomic # 1 Polarization: -23.43 SS G_CDS: -0.41 Total: -23.83 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: 4.67 Total: 7.00 kcal Atomic # 7 Polarization: 8.69 SS G_CDS: -4.63 Total: 4.06 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -1.93 Total: -6.09 kcal Atomic # 9 Polarization: -3.13 SS G_CDS: 2.27 Total: -0.86 kcal Atomic # 14 Polarization: 1.51 SS G_CDS: 2.09 Total: 3.60 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -0.69 Total: -0.87 kcal Total: -18.36 1.37 -16.98 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.009 kcal (2) G-P(sol) polarization free energy of solvation -18.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.365 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.981 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds