Wall clock time and date at job start Sat Mar 6 2021 11:16:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47419 * 2 1 4 4 C 1.50698 * 109.46983 * 120.00283 * 2 1 3 5 5 C 1.35452 * 125.56262 * 245.01982 * 4 2 1 6 6 C 1.39837 * 107.86322 * 179.71780 * 5 4 2 7 7 C 1.37872 * 107.08599 * 0.24276 * 6 5 4 8 8 C 1.46679 * 126.22973 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00233 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99504 * 179.97438 * 8 7 6 11 11 C 1.46507 * 119.99687 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.84887 * 336.20338 * 11 10 8 13 13 C 1.53782 * 113.60929 * 107.50521 * 11 10 8 14 14 C 1.53784 * 87.08034 * 89.11751 * 13 11 10 15 15 H 1.09005 * 113.68953 * 270.86771 * 14 13 11 16 16 C 1.50701 * 113.61510 * 139.98283 * 14 13 11 17 17 C 1.38242 * 119.98537 * 322.22108 * 16 14 13 18 18 C 1.38226 * 120.00630 * 179.77039 * 17 16 14 19 19 C 1.38325 * 119.98754 * 0.50872 * 18 17 16 20 20 Br 1.89101 * 120.00705 * 179.76670 * 19 18 17 21 21 C 1.38325 * 119.98400 * 359.74787 * 19 18 17 22 22 C 1.38225 * 119.98720 * 359.97438 * 21 19 18 23 23 C 1.53772 * 113.61395 * 205.00081 * 11 10 8 24 24 N 1.35539 * 125.56491 * 65.15098 * 4 2 1 25 25 H 0.96702 * 113.99688 * 59.99405 * 1 2 3 26 26 H 1.08998 * 109.46567 * 240.00131 * 2 1 3 27 27 H 1.48501 * 109.99837 * 59.99898 * 3 2 1 28 28 H 1.48495 * 110.00305 * 181.31912 * 3 2 1 29 29 H 1.08002 * 126.07027 * 359.97438 * 5 4 2 30 30 H 1.08000 * 126.45376 * 180.24185 * 6 5 4 31 31 H 0.97001 * 120.00537 * 0.02562 * 10 8 7 32 32 H 1.08998 * 113.61257 * 203.66204 * 13 11 10 33 33 H 1.09000 * 113.61384 * 334.56926 * 13 11 10 34 34 H 1.07995 * 119.99742 * 0.02724 * 17 16 14 35 35 H 1.07997 * 120.00386 * 180.28338 * 18 17 16 36 36 H 1.07994 * 120.00679 * 180.02562 * 21 19 18 37 37 H 1.07998 * 119.99566 * 180.02562 * 22 21 19 38 38 H 1.09005 * 113.61970 * 25.43722 * 23 11 10 39 39 H 1.09001 * 113.61458 * 156.33858 * 23 11 10 40 40 H 0.96992 * 125.68145 * 0.02933 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6326 -0.1393 2.2388 6 6 2.9018 -1.1296 3.1887 7 6 2.3494 -2.3023 2.7190 8 6 2.3865 -3.6070 3.3882 9 8 2.9453 -3.7240 4.4629 10 7 1.8017 -4.6763 2.8127 11 6 1.8392 -5.9796 3.4808 12 1 2.6711 -6.0737 4.1787 13 6 0.4856 -6.4081 4.0715 14 6 0.1850 -7.0554 2.7093 15 1 -0.2954 -6.3809 2.0004 16 6 -0.5125 -8.3871 2.8145 17 6 -0.1716 -9.2677 3.8242 18 6 -0.8144 -10.4873 3.9240 19 6 -1.7914 -10.8310 3.0070 20 35 -2.6664 -12.5022 3.1391 21 6 -2.1284 -9.9518 1.9938 22 6 -1.4891 -8.7300 1.8982 23 6 1.7063 -7.1701 2.5166 24 7 1.7573 -2.0258 1.5075 25 1 -0.3933 0.4418 -0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5616 2.4678 1.2085 28 1 3.5347 1.7702 -0.0321 29 1 2.9277 0.8978 2.3004 30 1 3.4408 -1.0002 4.1155 31 1 1.3566 -4.5832 1.9558 32 1 0.5727 -7.1265 4.8866 33 1 -0.1705 -5.5714 4.3117 34 1 0.5940 -9.0010 4.5376 35 1 -0.5512 -11.1733 4.7155 36 1 -2.8914 -10.2195 1.2779 37 1 -1.7524 -8.0432 1.1074 38 1 2.0357 -6.9488 1.5013 39 1 2.1271 -8.0969 2.9065 40 1 1.2898 -2.6649 0.9474 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:31 Heat of formation + Delta-G solvation = 36.205890 kcal Electronic energy + Delta-G solvation = -24670.972926 eV Core-core repulsion = 20885.965785 eV Total energy + Delta-G solvation = -3785.007142 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.041 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.58247 -41.58919 -40.16981 -38.81911 -37.80118 -34.87561 -33.18266 -32.21153 -32.11973 -31.52929 -30.35743 -27.21921 -26.92439 -25.83470 -24.09444 -23.39680 -22.46631 -21.66406 -21.20063 -20.29068 -19.69626 -18.66493 -18.13465 -17.17541 -16.92068 -16.57974 -16.36121 -16.19787 -15.86882 -15.44225 -15.30171 -15.11837 -14.87750 -14.71704 -14.52463 -14.44933 -14.31902 -13.79134 -13.67547 -13.54711 -13.49665 -13.00815 -12.75389 -12.54944 -12.16362 -12.05953 -12.03760 -11.50923 -11.40284 -11.25602 -11.20198 -10.63550 -10.27872 -10.12760 -10.10618 -9.58178 -9.30162 -5.09658 -0.02868 0.22073 0.29994 0.64148 1.05690 1.45549 1.63295 1.86696 1.92950 2.03251 2.31706 2.46129 3.14759 3.23427 3.45474 3.49755 3.65265 3.67448 3.72280 3.77751 3.82405 3.96736 4.02581 4.17670 4.21726 4.28496 4.35283 4.44382 4.53336 4.60305 4.65826 4.71117 4.82801 4.87025 4.91712 4.94645 5.01299 5.12648 5.14125 5.33905 5.47643 5.56109 5.70986 5.75438 6.14197 6.33600 6.38135 7.05616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.060 4.060 3 Si 0.717 3.283 4 C 0.070 3.930 5 C -0.206 4.206 6 C -0.094 4.094 7 C -0.051 4.051 8 C 0.595 3.405 9 O -0.520 6.520 10 N -0.715 5.715 11 C 0.121 3.879 12 H 0.110 0.890 13 C -0.144 4.144 14 C -0.077 4.077 15 H 0.098 0.902 16 C -0.056 4.056 17 C -0.111 4.111 18 C -0.087 4.087 19 C -0.094 4.094 20 Br -0.050 7.050 21 C -0.088 4.088 22 C -0.111 4.111 23 C -0.135 4.135 24 N -0.522 5.522 25 H 0.387 0.613 26 H 0.076 0.924 27 H -0.247 1.247 28 H -0.252 1.252 29 H 0.144 0.856 30 H 0.155 0.845 31 H 0.395 0.605 32 H 0.099 0.901 33 H 0.077 0.923 34 H 0.133 0.867 35 H 0.134 0.866 36 H 0.133 0.867 37 H 0.130 0.870 38 H 0.077 0.923 39 H 0.102 0.898 40 H 0.417 0.583 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.180 2.376 -7.046 7.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.169 4.169 3 Si 0.615 3.385 4 C -0.048 4.048 5 C -0.230 4.230 6 C -0.120 4.120 7 C -0.164 4.164 8 C 0.383 3.617 9 O -0.395 6.395 10 N -0.366 5.366 11 C 0.015 3.985 12 H 0.128 0.872 13 C -0.182 4.182 14 C -0.095 4.095 15 H 0.116 0.884 16 C -0.056 4.056 17 C -0.130 4.130 18 C -0.107 4.107 19 C -0.174 4.174 20 Br 0.036 6.964 21 C -0.108 4.108 22 C -0.129 4.129 23 C -0.172 4.172 24 N -0.118 5.118 25 H 0.236 0.764 26 H 0.094 0.906 27 H -0.171 1.171 28 H -0.176 1.176 29 H 0.161 0.839 30 H 0.172 0.828 31 H 0.229 0.771 32 H 0.117 0.883 33 H 0.095 0.905 34 H 0.151 0.849 35 H 0.152 0.848 36 H 0.151 0.849 37 H 0.148 0.852 38 H 0.096 0.904 39 H 0.120 0.880 40 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -0.592 1.777 -5.281 5.603 hybrid contribution -0.392 -0.605 -0.648 0.970 sum -0.984 1.172 -5.930 6.124 Atomic orbital electron populations 1.86486 1.17023 1.81998 1.50116 1.24519 0.85875 1.11397 0.95155 0.95140 0.80760 0.75481 0.87106 1.19956 1.03324 0.83699 0.97867 1.20598 1.07206 0.99829 0.95398 1.21300 1.00778 0.89982 0.99987 1.20393 1.10222 0.95877 0.89952 1.16993 0.78133 0.81984 0.84588 1.90878 1.43883 1.84168 1.20576 1.45546 1.58122 1.08731 1.24229 1.21873 0.99329 0.81579 0.95674 0.87174 1.23586 0.97171 1.00977 0.96485 1.21652 0.95214 0.93604 0.99030 0.88355 1.19815 0.95676 0.95392 0.94739 1.21045 1.00209 0.93234 0.98497 1.21152 0.94561 0.97047 0.97898 1.21866 1.01024 0.93976 1.00510 1.96784 1.77842 1.23538 1.98273 1.21150 0.99457 0.93272 0.96874 1.21079 0.96282 0.96360 0.99226 1.23440 0.94676 0.98649 1.00484 1.41905 1.43277 1.09240 1.17393 0.76430 0.90637 1.17147 1.17622 0.83863 0.82781 0.77140 0.88317 0.90464 0.84902 0.84831 0.84900 0.85182 0.90390 0.88001 0.74592 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.99 12.86 -35.23 -0.45 0.53 16 2 C -0.06 0.11 3.07 36.00 0.11 0.22 16 3 Si 0.72 -1.79 30.56 -169.99 -5.19 -6.98 16 4 C 0.07 0.08 6.50 -81.95 -0.53 -0.45 16 5 C -0.21 -0.51 9.32 -39.98 -0.37 -0.88 16 6 C -0.09 -0.30 10.65 -39.12 -0.42 -0.72 16 7 C -0.05 -0.12 7.06 -81.98 -0.58 -0.70 16 8 C 0.60 1.66 7.79 -12.85 -0.10 1.56 16 9 O -0.52 -3.40 16.48 5.20 0.09 -3.31 16 10 N -0.72 0.55 5.26 -54.32 -0.29 0.27 16 11 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 12 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 13 C -0.14 0.22 7.25 -25.92 -0.19 0.03 16 14 C -0.08 0.19 3.86 -90.96 -0.35 -0.16 16 15 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 16 C -0.06 0.06 5.29 -104.62 -0.55 -0.49 16 17 C -0.11 0.09 8.60 -39.58 -0.34 -0.25 16 18 C -0.09 -0.01 9.79 -39.55 -0.39 -0.40 16 19 C -0.09 -0.09 6.22 -39.52 -0.25 -0.34 16 20 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 21 C -0.09 -0.01 9.79 -39.55 -0.39 -0.40 16 22 C -0.11 0.09 9.71 -39.59 -0.38 -0.29 16 23 C -0.13 0.37 7.29 -25.92 -0.19 0.18 16 24 N -0.52 -0.04 5.99 -5.69 -0.03 -0.08 16 25 H 0.39 -2.63 8.74 45.56 0.40 -2.24 16 26 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 27 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 28 H -0.25 -0.06 7.11 56.52 0.40 0.35 16 29 H 0.14 0.23 6.19 -52.49 -0.32 -0.10 16 30 H 0.15 0.42 8.06 -52.49 -0.42 -0.01 16 31 H 0.39 -1.35 7.83 -40.82 -0.32 -1.67 16 32 H 0.10 -0.19 6.32 -51.93 -0.33 -0.52 16 33 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.13 -0.33 6.67 -52.49 -0.35 -0.68 16 35 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 36 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.13 -0.35 8.05 -52.49 -0.42 -0.78 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.10 -0.29 7.71 -51.93 -0.40 -0.69 16 40 H 0.42 -1.21 8.19 -40.82 -0.33 -1.54 16 LS Contribution 359.25 15.07 5.41 5.41 Total: 0.00 -9.16 359.25 -12.58 -21.74 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -4.61 Total: -11.74 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -5.21 Total: -3.49 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.32 Total: 0.19 kcal Atomic # 8 Polarization: -2.41 SS G_CDS: -0.37 Total: -2.77 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: -5.19 Total: -6.98 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.16 -12.58 -21.74 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.950 kcal (2) G-P(sol) polarization free energy of solvation -9.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.744 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds