Wall clock time and date at job start Sat Mar 6 2021 11:16:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47419 * 2 1 4 4 C 1.50698 * 109.46983 * 120.00283 * 2 1 3 5 5 C 1.35452 * 125.56262 * 245.01982 * 4 2 1 6 6 C 1.39837 * 107.86322 * 179.71780 * 5 4 2 7 7 C 1.37872 * 107.08599 * 0.24276 * 6 5 4 8 8 C 1.46679 * 126.22973 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00233 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99504 * 179.97438 * 8 7 6 11 11 C 1.46507 * 119.99687 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.84887 * 336.20338 * 11 10 8 13 13 C 1.53782 * 113.60929 * 107.50521 * 11 10 8 14 14 C 1.53784 * 87.08034 * 89.11751 * 13 11 10 15 15 H 1.09005 * 113.68953 * 270.86771 * 14 13 11 16 16 C 1.50701 * 113.61510 * 139.98283 * 14 13 11 17 17 C 1.38242 * 119.98537 * 322.22108 * 16 14 13 18 18 C 1.38226 * 120.00630 * 179.77039 * 17 16 14 19 19 C 1.38325 * 119.98754 * 0.50872 * 18 17 16 20 20 Br 1.89101 * 120.00705 * 179.76670 * 19 18 17 21 21 C 1.38325 * 119.98400 * 359.74787 * 19 18 17 22 22 C 1.38225 * 119.98720 * 359.97438 * 21 19 18 23 23 C 1.53772 * 113.61395 * 205.00081 * 11 10 8 24 24 N 1.35539 * 125.56491 * 65.15098 * 4 2 1 25 25 H 0.96702 * 113.99688 * 59.99405 * 1 2 3 26 26 H 1.08998 * 109.46567 * 240.00131 * 2 1 3 27 27 H 1.48501 * 109.99837 * 59.99898 * 3 2 1 28 28 H 1.48495 * 110.00305 * 181.31912 * 3 2 1 29 29 H 1.08002 * 126.07027 * 359.97438 * 5 4 2 30 30 H 1.08000 * 126.45376 * 180.24185 * 6 5 4 31 31 H 0.97001 * 120.00537 * 0.02562 * 10 8 7 32 32 H 1.08998 * 113.61257 * 203.66204 * 13 11 10 33 33 H 1.09000 * 113.61384 * 334.56926 * 13 11 10 34 34 H 1.07995 * 119.99742 * 0.02724 * 17 16 14 35 35 H 1.07997 * 120.00386 * 180.28338 * 18 17 16 36 36 H 1.07994 * 120.00679 * 180.02562 * 21 19 18 37 37 H 1.07998 * 119.99566 * 180.02562 * 22 21 19 38 38 H 1.09005 * 113.61970 * 25.43722 * 23 11 10 39 39 H 1.09001 * 113.61458 * 156.33858 * 23 11 10 40 40 H 0.96992 * 125.68145 * 0.02933 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6326 -0.1393 2.2388 6 6 2.9018 -1.1296 3.1887 7 6 2.3494 -2.3023 2.7190 8 6 2.3865 -3.6070 3.3882 9 8 2.9453 -3.7240 4.4629 10 7 1.8017 -4.6763 2.8127 11 6 1.8392 -5.9796 3.4808 12 1 2.6711 -6.0737 4.1787 13 6 0.4856 -6.4081 4.0715 14 6 0.1850 -7.0554 2.7093 15 1 -0.2954 -6.3809 2.0004 16 6 -0.5125 -8.3871 2.8145 17 6 -0.1716 -9.2677 3.8242 18 6 -0.8144 -10.4873 3.9240 19 6 -1.7914 -10.8310 3.0070 20 35 -2.6664 -12.5022 3.1391 21 6 -2.1284 -9.9518 1.9938 22 6 -1.4891 -8.7300 1.8982 23 6 1.7063 -7.1701 2.5166 24 7 1.7573 -2.0258 1.5075 25 1 -0.3933 0.4418 -0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5616 2.4678 1.2085 28 1 3.5347 1.7702 -0.0321 29 1 2.9277 0.8978 2.3004 30 1 3.4408 -1.0002 4.1155 31 1 1.3566 -4.5832 1.9558 32 1 0.5727 -7.1265 4.8866 33 1 -0.1705 -5.5714 4.3117 34 1 0.5940 -9.0010 4.5376 35 1 -0.5512 -11.1733 4.7155 36 1 -2.8914 -10.2195 1.2779 37 1 -1.7524 -8.0432 1.1074 38 1 2.0357 -6.9488 1.5013 39 1 2.1271 -8.0969 2.9065 40 1 1.2898 -2.6649 0.9474 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:30 Heat of formation + Delta-G solvation = 37.199905 kcal Electronic energy + Delta-G solvation = -24670.929823 eV Core-core repulsion = 20885.965785 eV Total energy + Delta-G solvation = -3784.964038 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.041 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.67880 -41.52656 -40.23746 -38.84594 -37.62416 -34.95682 -33.18288 -32.29235 -32.06367 -31.56607 -30.33616 -27.20388 -26.76924 -25.75990 -24.03618 -23.43891 -22.43498 -21.74860 -21.32516 -20.23155 -19.72474 -18.45827 -18.06738 -17.18417 -16.89849 -16.53233 -16.45572 -16.14074 -15.79381 -15.45700 -15.31864 -15.13166 -14.86313 -14.70272 -14.49796 -14.40789 -14.31934 -13.86756 -13.55608 -13.54196 -13.49316 -12.95999 -12.70169 -12.44895 -12.12015 -12.04967 -11.92905 -11.46593 -11.43879 -11.31187 -11.27598 -10.45247 -10.33396 -10.25207 -10.03631 -9.54498 -9.41028 -4.93395 0.02335 0.15790 0.29539 0.63346 1.19450 1.34775 1.74968 1.81095 2.01115 2.10353 2.13093 2.53260 3.31536 3.37162 3.59268 3.59799 3.69995 3.78812 3.82788 3.90255 3.92608 4.02587 4.13912 4.14902 4.32902 4.37638 4.39902 4.55675 4.67568 4.72517 4.75056 4.77716 4.82863 4.88304 4.95419 4.99936 5.05324 5.20291 5.21012 5.37208 5.44687 5.57709 5.59551 5.80910 6.17413 6.36122 6.85639 6.94107 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.060 4.060 3 Si 0.808 3.192 4 C 0.070 3.930 5 C -0.231 4.231 6 C -0.119 4.119 7 C -0.059 4.059 8 C 0.595 3.405 9 O -0.567 6.567 10 N -0.696 5.696 11 C 0.113 3.887 12 H 0.090 0.910 13 C -0.143 4.143 14 C -0.066 4.066 15 H 0.115 0.885 16 C -0.057 4.057 17 C -0.115 4.115 18 C -0.099 4.099 19 C -0.110 4.110 20 Br -0.063 7.063 21 C -0.099 4.099 22 C -0.112 4.112 23 C -0.122 4.122 24 N -0.505 5.505 25 H 0.410 0.590 26 H 0.109 0.891 27 H -0.301 1.301 28 H -0.291 1.291 29 H 0.142 0.858 30 H 0.146 0.854 31 H 0.411 0.589 32 H 0.101 0.899 33 H 0.066 0.934 34 H 0.146 0.854 35 H 0.137 0.863 36 H 0.139 0.861 37 H 0.152 0.848 38 H 0.090 0.910 39 H 0.105 0.895 40 H 0.432 0.568 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.991 2.329 -9.328 9.818 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.170 4.170 3 Si 0.713 3.287 4 C -0.050 4.050 5 C -0.255 4.255 6 C -0.145 4.145 7 C -0.173 4.173 8 C 0.383 3.617 9 O -0.446 6.446 10 N -0.347 5.347 11 C 0.008 3.992 12 H 0.109 0.891 13 C -0.182 4.182 14 C -0.084 4.084 15 H 0.133 0.867 16 C -0.057 4.057 17 C -0.133 4.133 18 C -0.119 4.119 19 C -0.189 4.189 20 Br 0.022 6.978 21 C -0.118 4.118 22 C -0.131 4.131 23 C -0.160 4.160 24 N -0.102 5.102 25 H 0.263 0.737 26 H 0.126 0.874 27 H -0.229 1.229 28 H -0.218 1.218 29 H 0.160 0.840 30 H 0.164 0.836 31 H 0.247 0.753 32 H 0.119 0.881 33 H 0.085 0.915 34 H 0.164 0.836 35 H 0.155 0.845 36 H 0.157 0.843 37 H 0.169 0.831 38 H 0.109 0.891 39 H 0.123 0.877 40 H 0.273 0.727 Dipole moment (debyes) X Y Z Total from point charges -1.457 1.693 -7.646 7.965 hybrid contribution -0.134 -0.519 0.092 0.544 sum -1.591 1.174 -7.554 7.808 Atomic orbital electron populations 1.86432 1.16597 1.82549 1.51970 1.24595 0.86333 1.11253 0.94804 0.94250 0.77052 0.73248 0.84140 1.20456 1.02198 0.83986 0.98344 1.20740 1.08576 0.99929 0.96247 1.21421 1.01687 0.91061 1.00349 1.20280 1.10708 0.95437 0.90845 1.17082 0.77853 0.82709 0.84068 1.90850 1.46186 1.84885 1.22633 1.45387 1.56846 1.08025 1.24475 1.21936 0.99052 0.81909 0.96315 0.89143 1.23582 0.96447 1.00792 0.97364 1.21646 0.95278 0.93019 0.98498 0.86660 1.19989 0.95552 0.95768 0.94438 1.21252 1.00301 0.92891 0.98892 1.21301 0.94761 0.97722 0.98095 1.21990 1.01674 0.93827 1.01418 1.96758 1.78137 1.24523 1.98334 1.21334 0.99929 0.93678 0.96908 1.21349 0.95832 0.96223 0.99675 1.23385 0.94389 0.97623 1.00582 1.41837 1.42455 1.09330 1.16618 0.73734 0.87368 1.22886 1.21811 0.84024 0.83607 0.75262 0.88057 0.91491 0.83610 0.84473 0.84272 0.83063 0.89100 0.87675 0.72674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.36 12.86 -148.98 -1.92 1.44 16 2 C -0.06 0.34 3.07 71.24 0.22 0.56 16 3 Si 0.81 -4.25 30.56 68.60 2.10 -2.15 16 4 C 0.07 0.12 6.50 41.34 0.27 0.39 16 5 C -0.23 -1.43 9.32 22.01 0.21 -1.22 16 6 C -0.12 -1.00 10.65 22.57 0.24 -0.76 16 7 C -0.06 -0.32 7.06 40.35 0.28 -0.03 16 8 C 0.59 3.84 7.79 86.45 0.67 4.52 16 9 O -0.57 -8.60 16.48 -4.32 -0.07 -8.67 16 10 N -0.70 1.42 5.26 -444.00 -2.33 -0.92 16 11 C 0.11 -0.27 4.32 45.51 0.20 -0.07 16 12 H 0.09 0.20 7.46 -2.39 -0.02 0.18 16 13 C -0.14 0.52 7.25 31.12 0.23 0.74 16 14 C -0.07 0.46 3.86 -11.01 -0.04 0.41 16 15 H 0.12 -1.14 8.09 -2.38 -0.02 -1.16 16 16 C -0.06 0.21 5.29 -19.86 -0.11 0.10 16 17 C -0.11 0.27 8.60 22.27 0.19 0.46 16 18 C -0.10 -0.04 9.79 22.29 0.22 0.18 16 19 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 20 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.89 16 21 C -0.10 0.02 9.79 22.29 0.22 0.24 16 22 C -0.11 0.36 9.71 22.27 0.22 0.58 16 23 C -0.12 0.87 7.29 31.12 0.23 1.10 16 24 N -0.50 0.36 5.99 -171.93 -1.03 -0.68 16 25 H 0.41 -6.77 8.74 -74.06 -0.65 -7.41 16 26 H 0.11 -1.23 7.96 -2.39 -0.02 -1.25 16 27 H -0.30 -1.09 7.11 99.48 0.71 -0.38 16 28 H -0.29 -0.34 7.11 99.48 0.71 0.37 16 29 H 0.14 0.75 6.19 -2.91 -0.02 0.73 16 30 H 0.15 1.27 8.06 -2.91 -0.02 1.25 16 31 H 0.41 -3.54 7.83 -92.71 -0.73 -4.27 16 32 H 0.10 -0.42 6.32 -2.39 -0.02 -0.43 16 33 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 34 H 0.15 -0.81 6.67 -2.91 -0.02 -0.83 16 35 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 36 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 37 H 0.15 -1.20 8.05 -2.91 -0.02 -1.23 16 38 H 0.09 -0.82 8.14 -2.38 -0.02 -0.84 16 39 H 0.10 -0.76 7.71 -2.39 -0.02 -0.77 16 40 H 0.43 -3.42 8.19 -92.71 -0.76 -4.18 16 Total: 0.00 -24.08 359.25 -1.55 -25.63 By element: Atomic # 1 Polarization: -19.88 SS G_CDS: -0.98 Total: -20.86 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: 3.38 Total: 7.10 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -3.37 Total: -1.59 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: -1.99 Total: -7.23 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: 2.10 Total: -2.15 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.89 kcal Total: -24.08 -1.55 -25.63 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.827 kcal (2) G-P(sol) polarization free energy of solvation -24.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.745 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.545 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.628 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds