Wall clock time and date at job start Sat Mar 6 2021 11:16:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.32763 * 124.71458 * 64.72109 * 4 2 1 6 6 C 1.44429 * 113.08410 * 179.81670 * 5 4 2 7 7 C 1.47193 * 123.46368 * 180.21852 * 6 5 4 8 8 O 1.21638 * 119.99612 * 0.29616 * 7 6 5 9 9 N 1.34768 * 120.00004 * 180.29723 * 7 6 5 10 10 C 1.46498 * 119.99946 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.85086 * 336.19429 * 10 9 7 12 12 C 1.53789 * 113.61705 * 107.50094 * 10 9 7 13 13 C 1.53787 * 87.07944 * 89.11591 * 12 10 9 14 14 H 1.08995 * 113.61658 * 270.88771 * 13 12 10 15 15 C 1.50696 * 113.68752 * 139.99599 * 13 12 10 16 16 C 1.38244 * 119.98980 * 322.18385 * 15 13 12 17 17 C 1.38220 * 120.01078 * 179.77201 * 16 15 13 18 18 C 1.38332 * 119.98683 * 0.50939 * 17 16 15 19 19 Br 1.89100 * 120.01026 * 179.77038 * 18 17 16 20 20 C 1.38328 * 119.97925 * 359.74537 * 18 17 16 21 21 C 1.38217 * 119.98952 * 0.02562 * 20 18 17 22 22 C 1.53783 * 113.61503 * 204.99884 * 10 9 7 23 23 C 1.36010 * 113.07685 * 0.46308 * 6 5 4 24 24 S 1.70452 * 110.81852 * 359.75305 * 23 6 5 25 25 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 26 26 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 27 27 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 28 28 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 29 29 H 1.08004 * 123.45929 * 359.96690 * 5 4 2 30 30 H 0.97000 * 120.00526 * 0.02562 * 9 7 6 31 31 H 1.08993 * 113.61712 * 203.66653 * 12 10 9 32 32 H 1.08998 * 113.61074 * 334.57333 * 12 10 9 33 33 H 1.08004 * 119.99453 * 0.02648 * 16 15 13 34 34 H 1.08000 * 120.00721 * 180.23717 * 17 16 15 35 35 H 1.07997 * 120.00359 * 180.02562 * 20 18 17 36 36 H 1.07998 * 119.99171 * 180.02562 * 21 20 18 37 37 H 1.08994 * 113.61628 * 25.43278 * 22 10 9 38 38 H 1.08999 * 113.61401 * 156.25323 * 22 10 9 39 39 H 1.07998 * 124.58935 * 179.77379 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 1.7440 -1.9992 1.4886 6 6 2.3364 -2.4185 2.7373 7 6 2.2702 -3.7989 3.2440 8 8 1.6983 -4.6568 2.5987 9 7 2.8433 -4.1121 4.4229 10 6 2.7770 -5.4859 4.9275 11 1 1.9361 -6.0466 4.5193 12 6 4.1168 -6.2366 4.8483 13 6 4.4214 -5.6801 6.2493 14 1 4.9203 -4.7111 6.2353 15 6 5.0957 -6.6723 7.1614 16 6 4.7296 -8.0049 7.1242 17 6 5.3510 -8.9161 7.9572 18 6 6.3321 -8.4926 8.8357 19 35 7.1781 -9.7375 9.9803 20 6 6.6943 -7.1582 8.8763 21 6 6.0756 -6.2486 8.0395 22 6 2.9005 -5.5870 6.4570 23 6 2.9571 -1.4055 3.3995 24 16 2.8389 0.0524 2.5244 25 1 -0.3934 0.4418 -0.7650 26 1 1.7923 -0.5137 -0.8901 27 1 1.5616 2.4678 1.2086 28 1 3.5346 1.7703 -0.0322 29 1 1.2060 -2.6663 0.8312 30 1 3.2990 -3.4279 4.9377 31 1 4.0090 -7.3209 4.8232 32 1 4.7841 -5.8585 4.0738 33 1 3.9607 -8.3347 6.4411 34 1 5.0676 -9.9577 7.9254 35 1 7.4605 -6.8272 9.5617 36 1 6.3587 -5.2068 8.0709 37 1 2.5859 -4.6846 6.9811 38 1 2.4589 -6.4931 6.8717 39 1 3.4574 -1.5108 4.3508 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_6894386.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:46 Heat of formation + Delta-G solvation = 24.160027 kcal Electronic energy + Delta-G solvation = -24220.152202 eV Core-core repulsion = 20460.974729 eV Total energy + Delta-G solvation = -3759.177473 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.003 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.75526 -40.58575 -39.21013 -38.46114 -37.15240 -34.79593 -33.15180 -32.14301 -31.82984 -30.32887 -27.01080 -26.88540 -26.58231 -25.19149 -23.94240 -22.53620 -22.03181 -20.53662 -20.32530 -18.72071 -18.48781 -18.32606 -17.86532 -17.01099 -16.50348 -16.38343 -16.16922 -16.02294 -15.68242 -15.23888 -15.16877 -14.73015 -14.58648 -14.40900 -14.29239 -13.94980 -13.89522 -13.79988 -13.62338 -13.42009 -12.98591 -12.68950 -12.52332 -12.34019 -12.12454 -12.09411 -12.00090 -11.48281 -11.35921 -11.23945 -10.95373 -10.52126 -10.19684 -10.08757 -10.01645 -9.57308 -9.54445 -5.33663 -0.41858 -0.00886 0.23949 0.31968 0.65600 0.67077 0.86450 1.10011 1.48543 1.79139 1.99072 2.30367 2.48175 3.22891 3.28079 3.48847 3.54052 3.59291 3.69520 3.77488 3.80855 3.84220 3.92989 4.00381 4.21429 4.23736 4.29880 4.31791 4.49169 4.56813 4.62510 4.66108 4.71596 4.75601 4.86008 4.90301 4.95281 5.02039 5.14877 5.15887 5.17875 5.41424 5.52485 5.72940 6.38006 6.48931 7.15710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.035 4.035 3 Si 0.670 3.330 4 C -0.197 4.197 5 C -0.049 4.049 6 C -0.155 4.155 7 C 0.583 3.417 8 O -0.527 6.527 9 N -0.710 5.710 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.143 4.143 13 C -0.077 4.077 14 H 0.099 0.901 15 C -0.055 4.055 16 C -0.111 4.111 17 C -0.087 4.087 18 C -0.095 4.095 19 Br -0.050 7.050 20 C -0.088 4.088 21 C -0.111 4.111 22 C -0.135 4.135 23 C -0.203 4.203 24 S 0.177 5.823 25 H 0.385 0.615 26 H 0.085 0.915 27 H -0.234 1.234 28 H -0.238 1.238 29 H 0.159 0.841 30 H 0.399 0.601 31 H 0.098 0.902 32 H 0.076 0.924 33 H 0.133 0.867 34 H 0.134 0.866 35 H 0.133 0.867 36 H 0.130 0.870 37 H 0.078 0.922 38 H 0.101 0.899 39 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.741 5.084 -1.765 5.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.148 4.148 3 Si 0.569 3.431 4 C -0.314 4.314 5 C -0.078 4.078 6 C -0.173 4.173 7 C 0.369 3.631 8 O -0.404 6.404 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.127 0.873 12 C -0.182 4.182 13 C -0.095 4.095 14 H 0.117 0.883 15 C -0.056 4.056 16 C -0.130 4.130 17 C -0.107 4.107 18 C -0.174 4.174 19 Br 0.035 6.965 20 C -0.108 4.108 21 C -0.130 4.130 22 C -0.173 4.173 23 C -0.341 4.341 24 S 0.443 5.557 25 H 0.233 0.767 26 H 0.103 0.897 27 H -0.157 1.157 28 H -0.162 1.162 29 H 0.176 0.824 30 H 0.234 0.766 31 H 0.116 0.884 32 H 0.095 0.905 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.148 0.852 37 H 0.097 0.903 38 H 0.119 0.881 39 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 1.736 5.754 -0.551 6.035 hybrid contribution -0.259 -1.418 0.103 1.445 sum 1.477 4.336 -0.448 4.602 Atomic orbital electron populations 1.86525 1.16741 1.81847 1.49819 1.23997 0.85960 1.09674 0.95155 0.94685 0.81892 0.78133 0.88368 1.23428 1.09195 0.97304 1.01425 1.21040 0.97295 0.94378 0.95052 1.20213 1.05645 0.93954 0.97498 1.17560 0.78007 0.86931 0.80610 1.90827 1.42866 1.49587 1.57137 1.45494 1.57748 1.10925 1.21945 1.21862 0.99283 0.82838 0.94503 0.87315 1.23581 0.97358 1.01188 0.96067 1.21652 0.95390 0.97894 0.94562 0.88291 1.19825 0.95609 0.94163 0.95975 1.21046 1.00238 0.92466 0.99235 1.21150 0.94637 1.00505 0.94381 1.21864 1.01135 0.94229 1.00171 1.96782 1.79196 1.57412 1.63096 1.21148 0.99471 0.91252 0.98900 1.21078 0.96378 0.99760 0.95735 1.23437 0.94682 1.03890 0.95277 1.25799 1.05072 0.98330 1.04884 1.83205 1.51086 1.09970 1.11406 0.76665 0.89684 1.15710 1.16213 0.82366 0.76590 0.88412 0.90491 0.84905 0.84850 0.84924 0.85175 0.90331 0.88082 0.81083 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.07 12.85 -35.23 -0.45 -0.38 16 2 C -0.03 0.02 2.93 36.00 0.11 0.13 16 3 Si 0.67 -1.26 30.92 -169.99 -5.26 -6.52 16 4 C -0.20 -0.34 5.69 -36.19 -0.21 -0.55 16 5 C -0.05 -0.14 9.95 -39.02 -0.39 -0.52 16 6 C -0.15 -0.32 5.98 -104.63 -0.63 -0.94 16 7 C 0.58 1.71 7.79 -12.63 -0.10 1.61 16 8 O -0.53 -3.55 16.40 5.24 0.09 -3.46 16 9 N -0.71 0.33 5.23 -54.16 -0.28 0.05 16 10 C 0.12 -0.09 4.32 -67.11 -0.29 -0.38 16 11 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 12 C -0.14 0.21 7.26 -25.91 -0.19 0.02 16 13 C -0.08 0.18 3.85 -90.96 -0.35 -0.17 16 14 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 15 C -0.06 0.05 5.29 -104.62 -0.55 -0.50 16 16 C -0.11 0.08 8.60 -39.59 -0.34 -0.26 16 17 C -0.09 -0.02 9.79 -39.55 -0.39 -0.41 16 18 C -0.09 -0.10 6.22 -39.51 -0.25 -0.35 16 19 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 20 C -0.09 -0.02 9.79 -39.56 -0.39 -0.41 16 21 C -0.11 0.08 9.71 -39.59 -0.38 -0.31 16 22 C -0.13 0.33 7.29 -25.92 -0.19 0.14 16 23 C -0.20 0.06 10.38 29.93 0.31 0.37 16 24 S 0.18 0.10 20.20 -107.50 -2.17 -2.07 16 25 H 0.39 -2.06 8.74 45.56 0.40 -1.66 16 26 H 0.09 -0.19 7.96 -51.93 -0.41 -0.61 16 27 H -0.23 -0.21 7.11 56.52 0.40 0.20 16 28 H -0.24 -0.03 7.11 56.52 0.40 0.37 16 29 H 0.16 0.50 8.06 -52.48 -0.42 0.07 16 30 H 0.40 -1.24 7.20 -40.82 -0.29 -1.54 16 31 H 0.10 -0.18 6.33 -51.93 -0.33 -0.51 16 32 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.13 -0.31 6.68 -52.48 -0.35 -0.66 16 34 H 0.13 -0.10 8.06 -52.49 -0.42 -0.53 16 35 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.13 -0.33 8.05 -52.49 -0.42 -0.76 16 37 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.10 -0.26 7.72 -51.93 -0.40 -0.66 16 39 H 0.17 -0.62 7.01 -52.49 -0.37 -0.99 16 LS Contribution 364.08 15.07 5.49 5.49 Total: 0.00 -8.34 364.08 -13.40 -21.74 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -4.30 Total: -9.94 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -4.22 Total: -2.54 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.28 Total: 0.05 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.37 Total: -3.84 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.26 Total: -6.52 kcal Atomic # 16 Polarization: 0.10 SS G_CDS: -2.17 Total: -2.07 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -8.34 -13.40 -21.74 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_6894386.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.901 kcal (2) G-P(sol) polarization free energy of solvation -8.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.560 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds