Wall clock time and date at job start Sat Mar 6 2021 11:16:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37939 * 120.07052 * 2 1 4 4 C 1.38380 * 120.14051 * 179.72571 * 3 2 1 5 5 C 1.50701 * 119.85624 * 180.27512 * 4 3 2 6 6 C 1.38344 * 120.29379 * 0.50674 * 4 3 2 7 7 C 1.50694 * 119.92609 * 179.76924 * 6 4 3 8 8 O 1.42902 * 109.47203 * 284.71853 * 7 6 4 9 9 Si 1.86304 * 109.46919 * 164.72447 * 7 6 4 10 10 C 1.37984 * 120.14183 * 359.48871 * 6 4 3 11 11 C 1.39553 * 119.85198 * 0.25524 * 10 6 4 12 12 C 1.47851 * 120.14184 * 179.97438 * 11 10 6 13 13 O 1.21552 * 119.99757 * 173.75074 * 12 11 10 14 14 N 1.34779 * 119.99739 * 353.74896 * 12 11 10 15 15 C 1.46504 * 119.99588 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.85024 * 336.19491 * 15 14 12 17 17 C 1.53773 * 113.61416 * 107.50313 * 15 14 12 18 18 C 1.53788 * 87.08089 * 89.11357 * 17 15 14 19 19 H 1.08997 * 113.69063 * 270.87264 * 18 17 15 20 20 C 1.50696 * 113.61343 * 139.97945 * 18 17 15 21 21 C 1.38245 * 119.99034 * 322.23281 * 20 18 17 22 22 C 1.38224 * 120.00758 * 179.72957 * 21 20 18 23 23 C 1.38328 * 119.99046 * 0.53830 * 22 21 20 24 24 Br 1.89095 * 120.00954 * 179.70887 * 23 22 21 25 25 C 1.38327 * 119.97782 * 359.73139 * 23 22 21 26 26 C 1.38213 * 119.99333 * 0.02562 * 25 23 22 27 27 C 1.53776 * 87.07858 * 25.43094 * 18 17 15 28 28 H 1.08996 * 109.47142 * 263.43392 * 1 2 3 29 29 H 1.09004 * 109.46963 * 23.43568 * 1 2 3 30 30 H 1.09002 * 109.47060 * 143.43367 * 1 2 3 31 31 H 1.07998 * 119.92894 * 359.94859 * 3 2 1 32 32 H 1.09003 * 109.46859 * 270.23603 * 5 4 3 33 33 H 1.08998 * 109.46668 * 30.22654 * 5 4 3 34 34 H 1.08990 * 109.47453 * 150.22937 * 5 4 3 35 35 H 1.09000 * 109.47742 * 44.72414 * 7 6 4 36 36 H 0.96700 * 113.99294 * 60.00495 * 8 7 6 37 37 H 1.48503 * 109.99965 * 178.68173 * 9 7 6 38 38 H 1.48502 * 109.99915 * 299.99445 * 9 7 6 39 39 H 1.07999 * 120.07054 * 180.23588 * 10 6 4 40 40 H 0.97000 * 120.00043 * 0.02562 * 14 12 11 41 41 H 1.08998 * 113.61518 * 203.66243 * 17 15 14 42 42 H 1.08998 * 113.61776 * 334.56925 * 17 15 14 43 43 H 1.08000 * 119.99563 * 359.97438 * 21 20 18 44 44 H 1.08005 * 120.00368 * 180.24883 * 22 21 20 45 45 H 1.07997 * 120.00376 * 179.97438 * 25 23 22 46 46 H 1.07993 * 119.99674 * 179.97438 * 26 25 23 47 47 H 1.08996 * 113.61665 * 220.01503 * 27 18 17 48 48 H 1.09009 * 113.61581 * 89.11351 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1954 0.0057 5 6 4.3306 2.5033 0.0120 6 6 4.2814 0.0018 0.0009 7 6 5.7883 0.0133 0.0020 8 8 6.2628 0.3650 -1.2993 9 14 6.4219 -1.6783 0.4577 10 6 3.6021 -1.1993 0.0010 11 6 2.2065 -1.2080 0.0006 12 6 1.4722 -2.4912 0.0001 13 8 0.2620 -2.4989 0.1143 14 7 2.1446 -3.6524 -0.1270 15 6 1.4168 -4.9239 -0.1280 16 1 0.4516 -4.8595 0.3744 17 6 1.3503 -5.5945 -1.5102 18 6 2.6731 -6.2907 -1.1489 19 1 3.5589 -5.7195 -1.4269 20 6 2.7401 -7.7285 -1.5952 21 6 1.6139 -8.5272 -1.5244 22 6 1.6735 -9.8444 -1.9389 23 6 2.8630 -10.3666 -2.4142 24 35 2.9472 -12.1709 -2.9737 25 6 3.9910 -9.5686 -2.4796 26 6 3.9292 -8.2501 -2.0696 27 6 2.2685 -6.1214 0.3250 28 1 -0.3633 -0.1175 1.0209 29 1 -0.3633 0.9429 -0.4087 30 1 -0.3633 -0.8254 -0.6122 31 1 1.6582 2.1290 -0.0008 32 1 4.5117 2.8232 -1.0142 33 1 3.7383 3.2585 0.5287 34 1 5.2831 2.3744 0.5258 35 1 6.1456 0.7430 0.7286 36 1 5.9710 1.2358 -1.6022 37 1 7.9066 -1.6887 0.4313 38 1 5.9354 -2.0558 1.8090 39 1 4.1492 -2.1304 0.0011 40 1 3.1103 -3.6462 -0.2178 41 1 0.5117 -6.2816 -1.6223 42 1 1.4384 -4.8936 -2.3403 43 1 0.6865 -8.1207 -1.1489 44 1 0.7926 -10.4672 -1.8874 45 1 4.9200 -9.9760 -2.8502 46 1 4.8099 -7.6272 -2.1202 47 1 3.0977 -5.8459 0.9766 48 1 1.6808 -6.9526 0.7147 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:16:57 Heat of formation + Delta-G solvation = 15.444549 kcal Electronic energy + Delta-G solvation = -30471.731264 eV Core-core repulsion = 26311.948376 eV Total energy + Delta-G solvation = -4159.782889 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.077 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.90053 -41.09583 -40.01790 -38.82576 -37.56204 -35.05315 -34.32458 -33.49174 -32.71297 -31.99030 -30.38046 -29.28756 -28.55891 -26.64728 -25.97262 -25.44045 -23.95651 -23.70520 -22.88433 -22.13600 -21.05159 -20.05635 -18.93275 -18.30812 -17.86330 -17.16714 -16.68431 -16.48548 -16.36516 -16.18254 -16.14627 -15.96242 -15.42328 -15.14954 -14.94041 -14.85158 -14.61220 -14.50672 -14.42570 -14.20157 -14.11360 -13.85356 -13.48608 -13.40351 -13.36986 -12.99401 -12.80406 -12.77697 -12.69679 -12.54713 -12.35025 -12.12410 -12.01115 -11.78698 -11.37229 -11.34457 -11.25604 -11.20364 -11.16079 -10.68625 -10.15515 -9.96590 -9.88735 -9.62101 -9.46576 -4.97466 -0.27284 0.09827 0.16992 0.36707 0.68949 1.35105 1.59129 1.74084 1.95118 2.05022 2.60605 2.64549 3.45854 3.49077 3.54947 3.64041 3.70704 3.75534 3.78947 3.83829 3.87767 3.99415 4.01482 4.07886 4.12254 4.25987 4.37653 4.40675 4.45926 4.49771 4.53246 4.65657 4.69073 4.69998 4.75726 4.79235 4.83109 4.85554 4.92286 4.94127 5.05125 5.07563 5.08603 5.10837 5.18073 5.24573 5.27953 5.29776 5.42580 5.49250 5.56238 5.70434 5.79182 5.88679 6.47560 6.59944 7.16526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.028 4.028 3 C -0.134 4.134 4 C -0.043 4.043 5 C -0.131 4.131 6 C -0.137 4.137 7 C -0.085 4.085 8 O -0.544 6.544 9 Si 0.795 3.205 10 C -0.064 4.064 11 C -0.157 4.157 12 C 0.560 3.440 13 O -0.561 6.561 14 N -0.698 5.698 15 C 0.115 3.885 16 H 0.089 0.911 17 C -0.142 4.142 18 C -0.069 4.069 19 H 0.121 0.879 20 C -0.055 4.055 21 C -0.115 4.115 22 C -0.100 4.100 23 C -0.111 4.111 24 Br -0.066 7.066 25 C -0.100 4.100 26 C -0.111 4.111 27 C -0.126 4.126 28 H 0.069 0.931 29 H 0.073 0.927 30 H 0.078 0.922 31 H 0.147 0.853 32 H 0.095 0.905 33 H 0.081 0.919 34 H 0.076 0.924 35 H 0.084 0.916 36 H 0.375 0.625 37 H -0.294 1.294 38 H -0.263 1.263 39 H 0.150 0.850 40 H 0.413 0.587 41 H 0.098 0.902 42 H 0.069 0.931 43 H 0.146 0.854 44 H 0.136 0.864 45 H 0.138 0.862 46 H 0.155 0.845 47 H 0.091 0.909 48 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.804 3.254 0.154 4.298 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.029 4.029 3 C -0.152 4.152 4 C -0.044 4.044 5 C -0.187 4.187 6 C -0.137 4.137 7 C -0.193 4.193 8 O -0.352 6.352 9 Si 0.697 3.303 10 C -0.082 4.082 11 C -0.160 4.160 12 C 0.349 3.651 13 O -0.441 6.441 14 N -0.350 5.350 15 C 0.010 3.990 16 H 0.107 0.893 17 C -0.181 4.181 18 C -0.087 4.087 19 H 0.139 0.861 20 C -0.055 4.055 21 C -0.134 4.134 22 C -0.120 4.120 23 C -0.190 4.190 24 Br 0.020 6.980 25 C -0.119 4.119 26 C -0.130 4.130 27 C -0.164 4.164 28 H 0.087 0.913 29 H 0.092 0.908 30 H 0.097 0.903 31 H 0.164 0.836 32 H 0.113 0.887 33 H 0.100 0.900 34 H 0.094 0.906 35 H 0.101 0.899 36 H 0.224 0.776 37 H -0.222 1.222 38 H -0.188 1.188 39 H 0.167 0.833 40 H 0.251 0.749 41 H 0.116 0.884 42 H 0.088 0.912 43 H 0.163 0.837 44 H 0.153 0.847 45 H 0.156 0.844 46 H 0.172 0.828 47 H 0.110 0.890 48 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 2.725 1.506 0.625 3.176 hybrid contribution 0.001 1.836 0.347 1.869 sum 2.726 3.342 0.972 4.421 Atomic orbital electron populations 1.21021 0.90105 1.03275 1.03031 1.20241 0.97013 0.92052 0.93638 1.21182 0.93674 0.98009 1.02290 1.20262 0.93735 0.95844 0.94541 1.21071 1.00431 0.92974 1.04191 1.20151 0.96392 0.93139 1.04067 1.25566 0.91711 1.13504 0.88557 1.86753 1.75604 1.41016 1.31797 0.92438 0.77520 0.79260 0.81050 1.21176 0.92416 0.98046 0.96607 1.19698 0.93690 0.92977 1.09638 1.18391 0.86768 0.84337 0.75637 1.90738 1.15074 1.87453 1.50845 1.45517 1.11293 1.04614 1.73594 1.21879 0.96776 0.82456 0.97927 0.89291 1.23561 0.97941 0.99390 0.97181 1.21704 0.99521 0.91143 0.96341 0.86052 1.20021 0.93116 0.95889 0.96500 1.21252 0.99590 0.92705 0.99828 1.21286 0.96561 0.96470 0.97697 1.21979 0.97960 0.91625 1.07456 1.96750 1.99050 1.12547 1.89680 1.21335 0.97403 0.94319 0.98886 1.21387 0.98831 0.94570 0.98204 1.23406 1.00327 0.96902 0.95795 0.91290 0.90807 0.90296 0.83554 0.88694 0.89999 0.90558 0.89908 0.77564 1.22155 1.18832 0.83292 0.74882 0.88391 0.91181 0.83664 0.84654 0.84381 0.82763 0.89031 0.87996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.46 8.73 71.24 0.62 0.16 16 2 C -0.03 -0.09 5.91 -19.61 -0.12 -0.21 16 3 C -0.13 0.04 9.31 22.23 0.21 0.25 16 4 C -0.04 0.09 5.87 -19.81 -0.12 -0.03 16 5 C -0.13 0.91 8.74 71.24 0.62 1.53 16 6 C -0.14 0.23 5.26 -19.90 -0.10 0.12 16 7 C -0.09 0.24 2.09 71.23 0.15 0.39 16 8 O -0.54 0.99 12.65 -148.98 -1.89 -0.89 16 9 Si 0.80 -2.77 30.16 68.60 2.07 -0.70 16 10 C -0.06 0.12 8.13 22.53 0.18 0.30 16 11 C -0.16 -0.37 5.87 -20.09 -0.12 -0.49 16 12 C 0.56 2.17 7.70 86.79 0.67 2.84 16 13 O -0.56 -5.98 12.95 -3.88 -0.05 -6.03 16 14 N -0.70 2.07 5.21 -442.91 -2.31 -0.24 16 15 C 0.11 -0.40 4.32 45.51 0.20 -0.20 16 16 H 0.09 0.08 7.46 -2.39 -0.02 0.06 16 17 C -0.14 0.68 7.25 31.12 0.23 0.90 16 18 C -0.07 0.52 3.86 -11.01 -0.04 0.48 16 19 H 0.12 -1.35 8.09 -2.39 -0.02 -1.37 16 20 C -0.05 0.22 5.29 -19.86 -0.11 0.12 16 21 C -0.12 0.30 8.59 22.27 0.19 0.49 16 22 C -0.10 -0.03 9.79 22.29 0.22 0.18 16 23 C -0.11 -0.23 6.22 22.31 0.14 -0.09 16 24 Br -0.07 -0.23 33.70 -20.37 -0.69 -0.91 16 25 C -0.10 0.03 9.79 22.29 0.22 0.25 16 26 C -0.11 0.40 9.71 22.27 0.22 0.62 16 27 C -0.13 0.95 7.29 31.12 0.23 1.18 16 28 H 0.07 0.36 8.14 -2.39 -0.02 0.34 16 29 H 0.07 0.02 8.04 -2.38 -0.02 0.00 16 30 H 0.08 0.62 5.86 -2.39 -0.01 0.61 16 31 H 0.15 -0.56 8.06 -2.91 -0.02 -0.59 16 32 H 0.09 -0.91 7.78 -2.39 -0.02 -0.93 16 33 H 0.08 -0.63 8.08 -2.39 -0.02 -0.65 16 34 H 0.08 -0.58 6.21 -2.39 -0.01 -0.59 16 35 H 0.08 -0.34 6.47 -2.39 -0.02 -0.36 16 36 H 0.37 -2.66 7.74 -74.06 -0.57 -3.23 16 37 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 38 H -0.26 0.23 7.11 99.48 0.71 0.94 16 39 H 0.15 -1.16 3.52 -2.91 -0.01 -1.17 16 40 H 0.41 -3.65 6.77 -92.71 -0.63 -4.28 16 41 H 0.10 -0.49 6.32 -2.39 -0.02 -0.51 16 42 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 43 H 0.15 -0.85 6.68 -2.91 -0.02 -0.87 16 44 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 45 H 0.14 -0.31 8.06 -2.91 -0.02 -0.33 16 46 H 0.15 -1.32 8.05 -2.91 -0.02 -1.35 16 47 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 48 H 0.10 -0.76 7.71 -2.38 -0.02 -0.77 16 Total: 0.00 -17.14 402.03 0.48 -16.66 By element: Atomic # 1 Polarization: -16.56 SS G_CDS: -0.14 Total: -16.70 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: 3.48 Total: 8.81 kcal Atomic # 7 Polarization: 2.07 SS G_CDS: -2.31 Total: -0.24 kcal Atomic # 8 Polarization: -4.98 SS G_CDS: -1.94 Total: -6.92 kcal Atomic # 14 Polarization: -2.77 SS G_CDS: 2.07 Total: -0.70 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.69 Total: -0.91 kcal Total: -17.14 0.48 -16.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.103 kcal (2) G-P(sol) polarization free energy of solvation -17.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.965 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.659 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds