Wall clock time and date at job start Sat Mar 6 2021 11:17:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47164 * 2 1 4 4 C 1.50694 * 109.47038 * 239.99705 * 2 1 3 5 5 C 1.34236 * 126.49981 * 105.35962 * 4 2 1 6 6 N 1.36838 * 109.94228 * 180.13290 * 5 4 2 7 7 C 1.46497 * 125.06481 * 179.81383 * 6 5 4 8 8 C 1.50694 * 109.47115 * 264.69780 * 7 6 5 9 9 O 1.21283 * 120.00363 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99988 * 180.02562 * 8 7 6 11 11 C 1.46493 * 119.99864 * 179.72721 * 10 8 7 12 12 H 1.08998 * 112.85495 * 25.32884 * 11 10 8 13 13 C 1.53787 * 113.61479 * 156.52932 * 11 10 8 14 14 C 1.53784 * 87.08067 * 89.11450 * 13 11 10 15 15 H 1.09005 * 113.60905 * 270.88268 * 14 13 11 16 16 C 1.50693 * 113.61418 * 140.06927 * 14 13 11 17 17 C 1.38245 * 119.98905 * 299.71884 * 16 14 13 18 18 C 1.38221 * 120.01019 * 179.76926 * 17 16 14 19 19 C 1.38323 * 119.98624 * 0.51059 * 18 17 16 20 20 Br 1.89104 * 120.00733 * 179.77127 * 19 18 17 21 21 C 1.38328 * 119.98423 * 359.74038 * 19 18 17 22 22 C 1.38222 * 119.98693 * 0.02562 * 21 19 18 23 23 C 1.53782 * 113.61314 * 254.13138 * 11 10 8 24 24 C 1.37693 * 109.87214 * 359.55195 * 6 5 4 25 25 C 1.39081 * 133.51553 * 180.28694 * 24 6 5 26 26 C 1.37789 * 119.77602 * 179.97438 * 25 24 6 27 27 C 1.38785 * 120.67145 * 0.02562 * 26 25 24 28 28 C 1.36661 * 120.52529 * 0.02562 * 27 26 25 29 29 C 1.39590 * 119.76885 * 359.95525 * 28 27 26 30 30 H 0.96703 * 113.99883 * 59.99659 * 1 2 3 31 31 H 1.09003 * 109.46693 * 120.00399 * 2 1 3 32 32 H 1.48506 * 110.00217 * 60.00123 * 3 2 1 33 33 H 1.48498 * 109.99963 * 181.31764 * 3 2 1 34 34 H 1.08000 * 125.03249 * 359.96608 * 5 4 2 35 35 H 1.08998 * 109.46734 * 144.69897 * 7 6 5 36 36 H 1.09002 * 109.47081 * 24.69668 * 7 6 5 37 37 H 0.97000 * 119.99339 * 0.02562 * 10 8 7 38 38 H 1.08997 * 113.61123 * 203.66007 * 13 11 10 39 39 H 1.08997 * 113.60979 * 334.56161 * 13 11 10 40 40 H 1.07999 * 119.99504 * 0.02562 * 17 16 14 41 41 H 1.08000 * 120.00458 * 180.28012 * 18 17 16 42 42 H 1.08000 * 120.00523 * 180.02562 * 21 19 18 43 43 H 1.07993 * 119.99113 * 179.97438 * 22 21 19 44 44 H 1.08999 * 113.61160 * 25.43919 * 23 11 10 45 45 H 1.09006 * 113.61519 * 156.33488 * 23 11 10 46 46 H 1.07999 * 120.11099 * 359.94481 * 25 24 6 47 47 H 1.08001 * 119.66742 * 179.97438 * 26 25 24 48 48 H 1.08002 * 119.73860 * 179.97438 * 27 26 25 49 49 H 1.08008 * 120.11952 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.4669 -0.1381 -2.3201 6 7 2.8040 -1.0992 -3.2340 7 6 3.4096 -0.8406 -4.5427 8 6 2.3306 -0.7840 -5.5931 9 8 1.1700 -0.9444 -5.2797 10 7 2.6554 -0.5562 -6.8813 11 6 1.6070 -0.5072 -7.9033 12 1 0.6338 -0.2299 -7.4985 13 6 2.0041 0.2929 -9.1552 14 6 2.5677 -1.0217 -9.7203 15 1 3.6105 -1.1987 -9.4565 16 6 2.2954 -1.2128 -11.1900 17 6 0.9929 -1.2607 -11.6509 18 6 0.7426 -1.4313 -12.9996 19 6 1.7955 -1.5646 -13.8866 20 35 1.4537 -1.8045 -15.7310 21 6 3.0986 -1.5219 -13.4244 22 6 3.3479 -1.3464 -12.0762 23 6 1.5671 -1.7523 -8.8050 24 6 2.4946 -2.3458 -2.7380 25 6 2.6302 -3.6363 -3.2386 26 6 2.2161 -4.7108 -2.4819 27 6 1.6636 -4.5194 -1.2232 28 6 1.5202 -3.2600 -0.7124 29 6 1.9333 -2.1570 -1.4616 30 1 -0.3933 0.4418 -0.7650 31 1 1.7923 -0.5139 0.8900 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0321 34 1 2.6082 0.9238 -2.4566 35 1 4.1095 -1.6407 -4.7835 36 1 3.9406 0.1109 -4.5157 37 1 3.5837 -0.4291 -7.1321 38 1 1.1523 0.6790 -9.7150 39 1 2.7659 1.0492 -8.9665 40 1 0.1708 -1.1607 -10.9577 41 1 -0.2749 -1.4641 -13.3601 42 1 3.9209 -1.6256 -14.1167 43 1 4.3652 -1.3135 -11.7152 44 1 1.9762 -2.6459 -8.3337 45 1 0.5959 -1.9243 -9.2692 46 1 3.0581 -3.7957 -4.2173 47 1 2.3218 -5.7122 -2.8725 48 1 1.3438 -5.3724 -0.6432 49 1 1.0890 -3.1185 0.2677 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:17:03 Heat of formation + Delta-G solvation = 61.860850 kcal Electronic energy + Delta-G solvation = -33023.671394 eV Core-core repulsion = 28544.023075 eV Total energy + Delta-G solvation = -4479.648319 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.073 amu Computer time = 2.20 seconds Orbital eigenvalues (eV) -42.51965 -41.70832 -40.42758 -39.00365 -37.98398 -37.48981 -34.90530 -34.03734 -33.09611 -32.17068 -31.40014 -30.44479 -30.13066 -28.93380 -26.96994 -26.29128 -25.48994 -24.06523 -23.65982 -22.86773 -22.43670 -21.87229 -20.61076 -20.35037 -18.84083 -18.45889 -17.99906 -17.68266 -17.32120 -16.97374 -16.56031 -16.41455 -16.32744 -16.22593 -15.91487 -15.51934 -15.45183 -15.16614 -15.01535 -14.71012 -14.64211 -14.57810 -14.49633 -14.31606 -13.96864 -13.86742 -13.69496 -13.55344 -13.30409 -13.03136 -12.61004 -12.57634 -12.46506 -12.19747 -12.11967 -12.06948 -12.02024 -11.68790 -11.53825 -11.43899 -11.26952 -11.15271 -10.44017 -10.30711 -10.21844 -10.12859 -9.60297 -9.03926 -8.54432 -5.02299 -0.05118 0.19947 0.26276 0.62510 0.77700 1.32237 1.36852 1.38511 1.66329 1.71591 2.02565 2.04666 2.43556 3.09727 3.19368 3.35476 3.40896 3.44879 3.52035 3.63531 3.64707 3.73374 3.74924 3.77969 3.80212 3.84327 3.94153 4.07047 4.19342 4.26354 4.30023 4.35450 4.40051 4.49627 4.56693 4.57740 4.61238 4.68310 4.69964 4.77432 4.78027 4.84520 4.88575 4.89144 4.97311 5.10298 5.12149 5.23890 5.30093 5.44871 5.63173 5.68854 5.79247 5.84685 5.88610 6.10632 6.28386 6.34741 6.77472 6.94836 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.509 6.509 10 N -0.712 5.712 11 C 0.121 3.879 12 H 0.106 0.894 13 C -0.134 4.134 14 C -0.076 4.076 15 H 0.100 0.900 16 C -0.057 4.057 17 C -0.111 4.111 18 C -0.087 4.087 19 C -0.094 4.094 20 Br -0.050 7.050 21 C -0.088 4.088 22 C -0.110 4.110 23 C -0.143 4.143 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.097 4.097 27 C -0.146 4.146 28 C -0.066 4.066 29 C -0.087 4.087 30 H 0.377 0.623 31 H 0.110 0.890 32 H -0.254 1.254 33 H -0.256 1.256 34 H 0.171 0.829 35 H 0.117 0.883 36 H 0.124 0.876 37 H 0.402 0.598 38 H 0.100 0.900 39 H 0.079 0.921 40 H 0.133 0.867 41 H 0.134 0.866 42 H 0.133 0.867 43 H 0.131 0.869 44 H 0.075 0.925 45 H 0.097 0.903 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.472 2.846 -3.530 6.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.035 4.035 8 C 0.278 3.722 9 O -0.382 6.382 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.124 0.876 13 C -0.171 4.171 14 C -0.094 4.094 15 H 0.118 0.882 16 C -0.057 4.057 17 C -0.130 4.130 18 C -0.107 4.107 19 C -0.174 4.174 20 Br 0.036 6.964 21 C -0.108 4.108 22 C -0.129 4.129 23 C -0.182 4.182 24 C 0.004 3.996 25 C -0.148 4.148 26 C -0.116 4.116 27 C -0.165 4.165 28 C -0.084 4.084 29 C -0.091 4.091 30 H 0.225 0.775 31 H 0.127 0.873 32 H -0.179 1.179 33 H -0.180 1.180 34 H 0.188 0.812 35 H 0.135 0.865 36 H 0.141 0.859 37 H 0.237 0.763 38 H 0.118 0.882 39 H 0.098 0.902 40 H 0.150 0.850 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.094 0.906 45 H 0.115 0.885 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.195 3.023 -3.281 6.124 hybrid contribution 0.719 -0.572 0.044 0.920 sum 4.914 2.451 -3.238 6.375 Atomic orbital electron populations 1.86492 1.17425 1.81824 1.48968 1.24330 0.84794 1.08747 0.96221 0.95256 0.80624 0.77863 0.87869 1.20651 1.09537 0.92421 0.97875 1.21505 1.01254 0.93774 0.89107 1.43184 1.53972 1.04658 1.13169 1.21577 0.94508 1.06022 0.81359 1.21016 0.90835 0.76963 0.83377 1.90822 1.19830 1.46804 1.80779 1.45632 1.10554 1.73752 1.06581 1.21855 0.92623 0.96753 0.87250 0.87572 1.23417 1.02159 0.96142 0.95429 1.21695 1.00161 0.97326 0.90227 0.88195 1.19816 0.93182 0.97673 0.95043 1.21043 0.96714 1.00299 0.94938 1.21153 0.98588 0.98112 0.92829 1.21871 0.96200 1.08083 0.91199 1.96789 1.96159 1.96130 1.07350 1.21157 0.95148 0.98250 0.96221 1.21077 0.99249 1.00176 0.92402 1.23618 1.00134 0.97917 0.96531 1.18162 1.01400 0.85830 0.94167 1.19945 1.05343 0.89277 1.00279 1.20824 0.98345 0.97955 0.94449 1.20671 1.02393 0.96947 0.96446 1.20311 0.97872 0.90953 0.99269 1.18947 1.03139 0.92815 0.94170 0.77546 0.87255 1.17866 1.18047 0.81208 0.86470 0.85854 0.76310 0.88152 0.90239 0.84957 0.84852 0.84905 0.85142 0.90581 0.88494 0.86778 0.85739 0.85932 0.85974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.21 12.88 -35.23 -0.45 -1.67 16 2 C -0.03 -0.04 3.06 36.00 0.11 0.07 16 3 Si 0.68 -0.45 30.75 -169.99 -5.23 -5.68 16 4 C -0.20 -0.44 5.58 -102.71 -0.57 -1.01 16 5 C 0.07 0.02 9.89 -16.73 -0.17 -0.14 16 6 N -0.47 -0.33 2.27 -115.71 -0.26 -0.59 16 7 C 0.09 -0.30 6.48 -5.20 -0.03 -0.33 16 8 C 0.49 -0.54 7.90 -10.98 -0.09 -0.63 16 9 O -0.51 -2.05 16.04 5.56 0.09 -1.96 16 10 N -0.71 2.77 5.26 -53.02 -0.28 2.49 16 11 C 0.12 -0.35 4.30 -67.12 -0.29 -0.64 16 12 H 0.11 -0.08 7.50 -51.93 -0.39 -0.47 16 13 C -0.13 0.56 7.29 -25.91 -0.19 0.37 16 14 C -0.08 0.29 3.86 -90.82 -0.35 -0.06 16 15 H 0.10 -0.50 8.09 -51.93 -0.42 -0.92 16 16 C -0.06 0.11 5.29 -104.62 -0.55 -0.44 16 17 C -0.11 0.17 8.63 -39.58 -0.34 -0.17 16 18 C -0.09 0.03 9.79 -39.56 -0.39 -0.35 16 19 C -0.09 -0.04 6.22 -39.52 -0.25 -0.29 16 20 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 21 C -0.09 0.04 9.79 -39.55 -0.39 -0.35 16 22 C -0.11 0.18 9.71 -39.59 -0.38 -0.20 16 23 C -0.14 0.41 7.27 -25.78 -0.19 0.23 16 24 C 0.11 0.34 6.80 -83.98 -0.57 -0.23 16 25 C -0.13 -0.30 10.00 -39.43 -0.39 -0.70 16 26 C -0.10 -0.21 10.01 -39.54 -0.40 -0.60 16 27 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 28 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 29 C -0.09 -0.35 6.35 -105.13 -0.67 -1.02 16 30 H 0.38 -0.48 8.70 45.56 0.40 -0.08 16 31 H 0.11 0.21 7.96 -51.93 -0.41 -0.20 16 32 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 33 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 34 H 0.17 -0.56 6.34 -52.49 -0.33 -0.90 16 35 H 0.12 -0.61 8.14 -51.93 -0.42 -1.03 16 36 H 0.12 -0.81 8.12 -51.93 -0.42 -1.23 16 37 H 0.40 -2.77 8.70 -40.82 -0.36 -3.12 16 38 H 0.10 -0.40 7.73 -51.93 -0.40 -0.80 16 39 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.13 -0.41 6.65 -52.49 -0.35 -0.76 16 41 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 43 H 0.13 -0.47 8.05 -52.49 -0.42 -0.89 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.10 -0.27 6.31 -51.93 -0.33 -0.60 16 46 H 0.11 0.04 8.06 -52.49 -0.42 -0.38 16 47 H 0.12 0.00 8.06 -52.49 -0.42 -0.43 16 48 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 49 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 430.28 15.07 6.48 6.48 Total: 0.00 -10.92 430.28 -15.27 -26.19 By element: Atomic # 1 Polarization: -8.58 SS G_CDS: -6.44 Total: -15.02 kcal Atomic # 6 Polarization: -1.02 SS G_CDS: -6.89 Total: -7.91 kcal Atomic # 7 Polarization: 2.45 SS G_CDS: -0.54 Total: 1.90 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.36 Total: -3.62 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.23 Total: -5.68 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -10.92 -15.27 -26.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.049 kcal (2) G-P(sol) polarization free energy of solvation -10.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -15.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.188 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.861 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.20 seconds