Wall clock time and date at job start Sat Mar 6 2021 11:17:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47164 * 2 1 4 4 C 1.50694 * 109.47038 * 239.99705 * 2 1 3 5 5 C 1.34236 * 126.49981 * 105.35962 * 4 2 1 6 6 N 1.36838 * 109.94228 * 180.13290 * 5 4 2 7 7 C 1.46497 * 125.06481 * 179.81383 * 6 5 4 8 8 C 1.50694 * 109.47115 * 264.69780 * 7 6 5 9 9 O 1.21283 * 120.00363 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99988 * 180.02562 * 8 7 6 11 11 C 1.46493 * 119.99864 * 179.72721 * 10 8 7 12 12 H 1.08998 * 112.85495 * 25.32884 * 11 10 8 13 13 C 1.53787 * 113.61479 * 156.52932 * 11 10 8 14 14 C 1.53784 * 87.08067 * 89.11450 * 13 11 10 15 15 H 1.09005 * 113.60905 * 270.88268 * 14 13 11 16 16 C 1.50693 * 113.61418 * 140.06927 * 14 13 11 17 17 C 1.38245 * 119.98905 * 299.71884 * 16 14 13 18 18 C 1.38221 * 120.01019 * 179.76926 * 17 16 14 19 19 C 1.38323 * 119.98624 * 0.51059 * 18 17 16 20 20 Br 1.89104 * 120.00733 * 179.77127 * 19 18 17 21 21 C 1.38328 * 119.98423 * 359.74038 * 19 18 17 22 22 C 1.38222 * 119.98693 * 0.02562 * 21 19 18 23 23 C 1.53782 * 113.61314 * 254.13138 * 11 10 8 24 24 C 1.37693 * 109.87214 * 359.55195 * 6 5 4 25 25 C 1.39081 * 133.51553 * 180.28694 * 24 6 5 26 26 C 1.37789 * 119.77602 * 179.97438 * 25 24 6 27 27 C 1.38785 * 120.67145 * 0.02562 * 26 25 24 28 28 C 1.36661 * 120.52529 * 0.02562 * 27 26 25 29 29 C 1.39590 * 119.76885 * 359.95525 * 28 27 26 30 30 H 0.96703 * 113.99883 * 59.99659 * 1 2 3 31 31 H 1.09003 * 109.46693 * 120.00399 * 2 1 3 32 32 H 1.48506 * 110.00217 * 60.00123 * 3 2 1 33 33 H 1.48498 * 109.99963 * 181.31764 * 3 2 1 34 34 H 1.08000 * 125.03249 * 359.96608 * 5 4 2 35 35 H 1.08998 * 109.46734 * 144.69897 * 7 6 5 36 36 H 1.09002 * 109.47081 * 24.69668 * 7 6 5 37 37 H 0.97000 * 119.99339 * 0.02562 * 10 8 7 38 38 H 1.08997 * 113.61123 * 203.66007 * 13 11 10 39 39 H 1.08997 * 113.60979 * 334.56161 * 13 11 10 40 40 H 1.07999 * 119.99504 * 0.02562 * 17 16 14 41 41 H 1.08000 * 120.00458 * 180.28012 * 18 17 16 42 42 H 1.08000 * 120.00523 * 180.02562 * 21 19 18 43 43 H 1.07993 * 119.99113 * 179.97438 * 22 21 19 44 44 H 1.08999 * 113.61160 * 25.43919 * 23 11 10 45 45 H 1.09006 * 113.61519 * 156.33488 * 23 11 10 46 46 H 1.07999 * 120.11099 * 359.94481 * 25 24 6 47 47 H 1.08001 * 119.66742 * 179.97438 * 26 25 24 48 48 H 1.08002 * 119.73860 * 179.97438 * 27 26 25 49 49 H 1.08008 * 120.11952 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.4669 -0.1381 -2.3201 6 7 2.8040 -1.0992 -3.2340 7 6 3.4096 -0.8406 -4.5427 8 6 2.3306 -0.7840 -5.5931 9 8 1.1700 -0.9444 -5.2797 10 7 2.6554 -0.5562 -6.8813 11 6 1.6070 -0.5072 -7.9033 12 1 0.6338 -0.2299 -7.4985 13 6 2.0041 0.2929 -9.1552 14 6 2.5677 -1.0217 -9.7203 15 1 3.6105 -1.1987 -9.4565 16 6 2.2954 -1.2128 -11.1900 17 6 0.9929 -1.2607 -11.6509 18 6 0.7426 -1.4313 -12.9996 19 6 1.7955 -1.5646 -13.8866 20 35 1.4537 -1.8045 -15.7310 21 6 3.0986 -1.5219 -13.4244 22 6 3.3479 -1.3464 -12.0762 23 6 1.5671 -1.7523 -8.8050 24 6 2.4946 -2.3458 -2.7380 25 6 2.6302 -3.6363 -3.2386 26 6 2.2161 -4.7108 -2.4819 27 6 1.6636 -4.5194 -1.2232 28 6 1.5202 -3.2600 -0.7124 29 6 1.9333 -2.1570 -1.4616 30 1 -0.3933 0.4418 -0.7650 31 1 1.7923 -0.5139 0.8900 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0321 34 1 2.6082 0.9238 -2.4566 35 1 4.1095 -1.6407 -4.7835 36 1 3.9406 0.1109 -4.5157 37 1 3.5837 -0.4291 -7.1321 38 1 1.1523 0.6790 -9.7150 39 1 2.7659 1.0492 -8.9665 40 1 0.1708 -1.1607 -10.9577 41 1 -0.2749 -1.4641 -13.3601 42 1 3.9209 -1.6256 -14.1167 43 1 4.3652 -1.3135 -11.7152 44 1 1.9762 -2.6459 -8.3337 45 1 0.5959 -1.9243 -9.2692 46 1 3.0581 -3.7957 -4.2173 47 1 2.3218 -5.7122 -2.8725 48 1 1.3438 -5.3724 -0.6432 49 1 1.0890 -3.1185 0.2677 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:17:02 Heat of formation + Delta-G solvation = 65.190875 kcal Electronic energy + Delta-G solvation = -33023.526993 eV Core-core repulsion = 28544.023075 eV Total energy + Delta-G solvation = -4479.503918 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.073 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.52769 -41.52382 -40.32806 -38.86801 -38.08062 -37.57037 -34.77483 -34.02118 -33.01195 -32.03810 -31.44582 -30.37879 -30.22466 -28.87702 -26.68993 -26.20034 -25.41094 -23.95373 -23.71837 -22.86348 -22.33490 -21.77673 -20.65473 -20.13464 -18.68842 -18.47061 -17.84491 -17.69742 -17.27671 -16.83720 -16.47916 -16.38003 -16.28086 -16.09250 -15.96405 -15.48563 -15.41831 -15.08683 -14.94519 -14.71768 -14.65235 -14.50592 -14.39290 -14.21112 -14.04829 -13.71115 -13.51738 -13.42835 -13.11122 -12.90378 -12.71856 -12.56730 -12.40135 -12.23217 -12.11246 -12.04190 -11.85668 -11.80577 -11.40914 -11.28638 -11.20497 -11.11552 -10.54849 -10.29680 -10.11388 -10.00278 -9.50676 -9.15491 -8.62066 -4.99098 0.05714 0.14326 0.32370 0.63170 0.65858 1.37565 1.42022 1.49439 1.69545 1.72052 2.01185 2.22253 2.56687 2.94341 3.46836 3.57603 3.64355 3.66366 3.69586 3.72357 3.78965 3.83949 3.89740 3.95197 3.97749 4.06353 4.18334 4.21532 4.21977 4.30500 4.36009 4.42359 4.48203 4.56142 4.65395 4.71776 4.71910 4.78796 4.79107 4.85979 4.89106 4.91166 5.03243 5.05656 5.13221 5.15612 5.24053 5.25146 5.50067 5.50532 5.65557 5.66208 5.73154 5.75485 5.84521 6.20748 6.24873 6.51897 6.82796 7.19072 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.048 4.048 3 Si 0.795 3.205 4 C -0.227 4.227 5 C 0.081 3.919 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.495 3.505 9 O -0.569 6.569 10 N -0.694 5.694 11 C 0.119 3.881 12 H 0.081 0.919 13 C -0.122 4.122 14 C -0.065 4.065 15 H 0.121 0.879 16 C -0.057 4.057 17 C -0.116 4.116 18 C -0.101 4.101 19 C -0.110 4.110 20 Br -0.065 7.065 21 C -0.100 4.100 22 C -0.111 4.111 23 C -0.146 4.146 24 C 0.091 3.909 25 C -0.132 4.132 26 C -0.109 4.109 27 C -0.154 4.154 28 C -0.092 4.092 29 C -0.118 4.118 30 H 0.390 0.610 31 H 0.091 0.909 32 H -0.302 1.302 33 H -0.273 1.273 34 H 0.210 0.790 35 H 0.142 0.858 36 H 0.167 0.833 37 H 0.421 0.579 38 H 0.096 0.904 39 H 0.095 0.905 40 H 0.144 0.856 41 H 0.135 0.865 42 H 0.139 0.861 43 H 0.154 0.846 44 H 0.067 0.933 45 H 0.091 0.909 46 H 0.134 0.866 47 H 0.145 0.855 48 H 0.134 0.866 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.735 4.157 -4.534 9.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.156 4.156 3 Si 0.699 3.301 4 C -0.234 4.234 5 C -0.044 4.044 6 N -0.149 5.149 7 C -0.037 4.037 8 C 0.281 3.719 9 O -0.446 6.446 10 N -0.347 5.347 11 C 0.013 3.987 12 H 0.099 0.901 13 C -0.160 4.160 14 C -0.083 4.083 15 H 0.139 0.861 16 C -0.057 4.057 17 C -0.134 4.134 18 C -0.120 4.120 19 C -0.190 4.190 20 Br 0.021 6.979 21 C -0.119 4.119 22 C -0.130 4.130 23 C -0.184 4.184 24 C -0.014 4.014 25 C -0.153 4.153 26 C -0.128 4.128 27 C -0.173 4.173 28 C -0.110 4.110 29 C -0.122 4.122 30 H 0.240 0.760 31 H 0.108 0.892 32 H -0.230 1.230 33 H -0.200 1.200 34 H 0.226 0.774 35 H 0.159 0.841 36 H 0.184 0.816 37 H 0.259 0.741 38 H 0.115 0.885 39 H 0.114 0.886 40 H 0.162 0.838 41 H 0.153 0.847 42 H 0.156 0.844 43 H 0.172 0.828 44 H 0.086 0.914 45 H 0.110 0.890 46 H 0.152 0.848 47 H 0.162 0.838 48 H 0.152 0.848 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 6.492 4.312 -4.352 8.926 hybrid contribution -0.019 -1.015 0.375 1.082 sum 6.473 3.298 -3.977 8.282 Atomic orbital electron populations 1.86442 1.18357 1.82430 1.50002 1.24705 0.84362 1.11060 0.95513 0.93994 0.77470 0.73470 0.85161 1.20799 1.11530 0.91889 0.99172 1.22084 0.98981 0.95302 0.88069 1.43441 1.53293 1.03724 1.14393 1.22002 0.93802 1.09248 0.78696 1.21394 0.90394 0.75817 0.84294 1.90813 1.22286 1.49780 1.81741 1.45474 1.11365 1.72274 1.05595 1.21775 0.92083 0.97209 0.87650 0.90085 1.23347 1.02394 0.96187 0.94067 1.21715 1.00927 0.97068 0.88624 0.86107 1.20046 0.92842 0.96793 0.96044 1.21245 0.97639 0.99923 0.94631 1.21290 0.98660 0.98670 0.93418 1.21983 0.96983 1.09418 0.90593 1.96758 1.96254 1.96263 1.08672 1.21345 0.94923 0.98542 0.97138 1.21366 1.00491 0.99285 0.91821 1.23607 1.00324 0.97639 0.96846 1.18380 1.01749 0.87119 0.94169 1.20245 1.04902 0.89115 1.00995 1.21119 0.98341 0.99092 0.94281 1.20901 1.02382 0.96957 0.97087 1.20436 0.99225 0.91881 0.99480 1.19383 1.03746 0.93951 0.95152 0.76024 0.89167 1.22976 1.19972 0.77389 0.84051 0.81556 0.74083 0.88507 0.88635 0.83846 0.84692 0.84359 0.82838 0.91383 0.89044 0.84805 0.83759 0.84778 0.86736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.56 12.88 -148.98 -1.92 -5.48 16 2 C -0.05 -0.19 3.06 71.23 0.22 0.03 16 3 Si 0.80 -1.40 30.75 68.60 2.11 0.71 16 4 C -0.23 -1.20 5.58 -18.63 -0.10 -1.30 16 5 C 0.08 -0.04 9.89 83.00 0.82 0.78 16 6 N -0.47 -0.08 2.27 -520.00 -1.18 -1.26 16 7 C 0.09 -0.81 6.48 85.63 0.56 -0.26 16 8 C 0.50 -1.89 7.90 87.65 0.69 -1.20 16 9 O -0.57 -4.65 16.04 -3.04 -0.05 -4.70 16 10 N -0.69 6.97 5.26 -440.04 -2.32 4.65 16 11 C 0.12 -0.81 4.30 45.52 0.20 -0.62 16 12 H 0.08 -0.08 7.50 -2.39 -0.02 -0.10 16 13 C -0.12 1.28 7.29 31.12 0.23 1.50 16 14 C -0.07 0.65 3.86 -10.92 -0.04 0.60 16 15 H 0.12 -1.65 8.09 -2.38 -0.02 -1.67 16 16 C -0.06 0.31 5.29 -19.86 -0.11 0.20 16 17 C -0.12 0.39 8.63 22.27 0.19 0.59 16 18 C -0.10 0.03 9.79 22.29 0.22 0.25 16 19 C -0.11 -0.14 6.22 22.31 0.14 0.00 16 20 Br -0.06 -0.18 33.70 -20.37 -0.69 -0.87 16 21 C -0.10 0.13 9.79 22.29 0.22 0.35 16 22 C -0.11 0.54 9.71 22.27 0.22 0.76 16 23 C -0.15 0.96 7.27 31.21 0.23 1.19 16 24 C 0.09 0.61 6.80 39.03 0.27 0.87 16 25 C -0.13 -0.64 10.00 22.37 0.22 -0.41 16 26 C -0.11 -0.55 10.01 22.29 0.22 -0.32 16 27 C -0.15 -1.11 9.97 22.03 0.22 -0.89 16 28 C -0.09 -0.94 10.05 22.23 0.22 -0.72 16 29 C -0.12 -1.18 6.35 -20.20 -0.13 -1.31 16 30 H 0.39 -0.50 8.70 -74.06 -0.64 -1.14 16 31 H 0.09 0.60 7.96 -2.39 -0.02 0.58 16 32 H -0.30 -1.83 7.11 99.48 0.71 -1.13 16 33 H -0.27 -0.33 7.11 99.48 0.71 0.37 16 34 H 0.21 -2.01 6.34 -2.91 -0.02 -2.03 16 35 H 0.14 -1.97 8.14 -2.39 -0.02 -1.99 16 36 H 0.17 -2.99 8.12 -2.39 -0.02 -3.01 16 37 H 0.42 -7.34 8.70 -92.71 -0.81 -8.15 16 38 H 0.10 -0.89 7.73 -2.39 -0.02 -0.91 16 39 H 0.10 -1.25 8.14 -2.39 -0.02 -1.27 16 40 H 0.14 -0.91 6.65 -2.91 -0.02 -0.93 16 41 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 42 H 0.14 -0.45 8.06 -2.91 -0.02 -0.47 16 43 H 0.15 -1.53 8.05 -2.91 -0.02 -1.55 16 44 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 45 H 0.09 -0.50 6.31 -2.38 -0.02 -0.52 16 46 H 0.13 -0.05 8.06 -2.91 -0.02 -0.07 16 47 H 0.14 -0.01 8.06 -2.91 -0.02 -0.04 16 48 H 0.13 0.44 8.06 -2.91 -0.02 0.42 16 49 H 0.11 1.12 8.06 -2.91 -0.02 1.10 16 Total: 0.00 -30.18 430.28 0.25 -29.93 By element: Atomic # 1 Polarization: -22.68 SS G_CDS: -0.41 Total: -23.09 kcal Atomic # 6 Polarization: -4.60 SS G_CDS: 4.69 Total: 0.09 kcal Atomic # 7 Polarization: 6.89 SS G_CDS: -3.50 Total: 3.40 kcal Atomic # 8 Polarization: -8.21 SS G_CDS: -1.97 Total: -10.17 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: 2.11 Total: 0.71 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -0.69 Total: -0.87 kcal Total: -30.18 0.25 -29.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.120 kcal (2) G-P(sol) polarization free energy of solvation -30.176 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.248 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.929 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.191 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds