Wall clock time and date at job start Sat Mar 6 2021 11:17:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36764 * 125.80315 * 2 1 4 4 C 1.47265 * 126.94220 * 0.04146 * 3 2 1 5 5 O 1.21631 * 120.00022 * 359.97438 * 4 3 2 6 6 N 1.34777 * 120.00073 * 180.02562 * 4 3 2 7 7 C 1.46505 * 119.99640 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.85423 * 336.19987 * 7 6 4 9 9 C 1.53780 * 113.61047 * 107.50520 * 7 6 4 10 10 C 1.53783 * 87.08322 * 89.11192 * 9 7 6 11 11 H 1.09001 * 113.69366 * 270.87171 * 10 9 7 12 12 C 1.50708 * 113.61315 * 139.97752 * 10 9 7 13 13 C 1.38233 * 119.99018 * 322.23247 * 12 10 9 14 14 C 1.38215 * 120.01024 * 179.76751 * 13 12 10 15 15 C 1.38322 * 119.98911 * 0.50479 * 14 13 12 16 16 Br 1.89097 * 120.01386 * 179.76795 * 15 14 13 17 17 C 1.38330 * 119.97914 * 359.74480 * 15 14 13 18 18 C 1.38216 * 119.98820 * 0.02562 * 17 15 14 19 19 C 1.53783 * 113.61237 * 204.99935 * 7 6 4 20 20 C 1.46684 * 106.12005 * 180.02562 * 3 2 1 21 21 C 1.34486 * 106.33174 * 359.97438 * 20 3 2 22 22 C 1.50694 * 125.57638 * 179.97438 * 21 20 3 23 23 O 1.42901 * 109.47118 * 64.99904 * 22 21 20 24 24 Si 1.86298 * 109.47775 * 185.00149 * 22 21 20 25 25 N 1.34665 * 125.79871 * 180.29361 * 2 1 3 26 26 H 1.08997 * 109.47410 * 90.00059 * 1 2 3 27 27 H 1.09001 * 109.46930 * 209.99984 * 1 2 3 28 28 H 1.09000 * 109.46617 * 329.99737 * 1 2 3 29 29 H 0.96997 * 120.00298 * 359.97438 * 6 4 3 30 30 H 1.09004 * 113.61374 * 203.66453 * 9 7 6 31 31 H 1.09005 * 113.61420 * 334.56214 * 9 7 6 32 32 H 1.08004 * 119.99566 * 0.02562 * 13 12 10 33 33 H 1.08001 * 120.00843 * 180.22961 * 14 13 12 34 34 H 1.07998 * 120.00458 * 179.97438 * 17 15 14 35 35 H 1.08004 * 119.99640 * 179.97438 * 18 17 15 36 36 H 1.09001 * 113.61697 * 25.43354 * 19 7 6 37 37 H 1.08996 * 113.61379 * 156.33931 * 19 7 6 38 38 H 1.08002 * 126.83770 * 179.97438 * 20 3 2 39 39 H 1.09004 * 109.47407 * 305.00261 * 22 21 20 40 40 H 0.96708 * 114.00246 * 180.02562 * 23 22 21 41 41 H 1.48506 * 109.99834 * 300.00486 * 24 22 21 42 42 H 1.48502 * 110.00011 * 61.31751 * 24 22 21 43 43 H 0.96994 * 124.85747 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 0.0009 5 8 0.6839 2.7839 0.0012 6 7 2.7851 3.5054 0.0002 7 6 2.3504 4.9044 0.0005 8 1 1.3469 5.0360 -0.4042 9 6 2.5733 5.6184 1.3441 10 6 3.9695 5.9966 0.8220 11 1 4.7365 5.2552 1.0458 12 6 4.3887 7.3990 1.1808 13 6 3.4585 8.4215 1.1732 14 6 3.8415 9.7070 1.5069 15 6 5.1580 9.9721 1.8383 16 35 5.6842 11.7317 2.2885 17 6 6.0896 8.9495 1.8408 18 6 5.7046 7.6635 1.5115 19 6 3.3868 5.8716 -0.5957 20 6 3.6882 0.6151 -0.0006 21 6 3.6096 -0.7274 -0.0004 22 6 4.7819 -1.6743 -0.0014 23 8 5.5114 -1.5305 1.2190 24 14 4.1656 -3.4258 -0.1537 25 7 2.2947 -1.0922 -0.0056 26 1 -0.3634 0.0000 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8900 0.5139 29 1 3.7311 3.2914 -0.0004 30 1 1.9174 6.4754 1.4973 31 1 2.5952 4.9427 2.1993 32 1 2.4315 8.2152 0.9105 33 1 3.1140 10.5051 1.5045 34 1 7.1177 9.1561 2.0991 35 1 6.4319 6.8650 1.5130 36 1 4.0655 5.4003 -1.3067 37 1 2.9533 6.7978 -0.9729 38 1 4.5891 1.2109 -0.0012 39 1 5.4342 -1.4441 -0.8438 40 1 6.2820 -2.1108 1.2874 41 1 3.2751 -3.7520 0.9891 42 1 3.4325 -3.5967 -1.4337 43 1 1.9735 -2.0074 -0.0099 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10390340_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:17:09 Heat of formation + Delta-G solvation = 32.101442 kcal Electronic energy + Delta-G solvation = -26711.537194 eV Core-core repulsion = 22770.814451 eV Total energy + Delta-G solvation = -3940.722743 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -42.52512 -41.46698 -40.01612 -38.64203 -37.80436 -34.60582 -33.10102 -32.91842 -32.10479 -31.95127 -30.26806 -29.05659 -26.76286 -26.34295 -25.30295 -24.01059 -23.40383 -22.29248 -21.50932 -20.71388 -20.04844 -18.67820 -18.27910 -17.96255 -17.11843 -16.94110 -16.45435 -16.24044 -16.09438 -15.84809 -15.41245 -15.35049 -14.96880 -14.85426 -14.55018 -14.51096 -14.46743 -14.31423 -14.14780 -13.73530 -13.52988 -13.52124 -13.40931 -12.96216 -12.87284 -12.50158 -12.43985 -12.22334 -12.01754 -11.90623 -11.39856 -11.24148 -11.19079 -10.78501 -10.50707 -10.05923 -10.01650 -9.83402 -9.49171 -9.17407 -5.33814 0.05983 0.30432 0.70806 0.73915 0.96197 1.15380 1.39008 1.62143 1.86193 2.36044 2.54558 2.62792 3.27924 3.40996 3.59525 3.64495 3.68022 3.78218 3.79491 3.90506 3.91495 4.06690 4.11244 4.13480 4.25107 4.30692 4.39027 4.46167 4.61228 4.65721 4.66298 4.70297 4.71286 4.82821 4.86472 4.96047 4.98355 5.01140 5.09304 5.21718 5.22214 5.25493 5.53333 5.65759 5.70956 5.79795 5.83412 6.22233 6.45350 6.68061 7.45527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.125 3.875 3 C -0.240 4.240 4 C 0.598 3.402 5 O -0.546 6.546 6 N -0.710 5.710 7 C 0.123 3.877 8 H 0.106 0.894 9 C -0.144 4.144 10 C -0.077 4.077 11 H 0.100 0.900 12 C -0.054 4.054 13 C -0.112 4.112 14 C -0.087 4.087 15 C -0.095 4.095 16 Br -0.052 7.052 17 C -0.088 4.088 18 C -0.111 4.111 19 C -0.135 4.135 20 C -0.123 4.123 21 C 0.014 3.986 22 C -0.039 4.039 23 O -0.543 6.543 24 Si 0.682 3.318 25 N -0.551 5.551 26 H 0.082 0.918 27 H 0.065 0.935 28 H 0.106 0.894 29 H 0.401 0.599 30 H 0.095 0.905 31 H 0.076 0.924 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.078 0.922 37 H 0.098 0.902 38 H 0.149 0.851 39 H 0.086 0.914 40 H 0.385 0.615 41 H -0.250 1.250 42 H -0.251 1.251 43 H 0.409 0.591 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.150 -5.642 -1.841 7.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.006 3.994 3 C -0.250 4.250 4 C 0.388 3.612 5 O -0.424 6.424 6 N -0.361 5.361 7 C 0.017 3.983 8 H 0.124 0.876 9 C -0.183 4.183 10 C -0.095 4.095 11 H 0.118 0.882 12 C -0.054 4.054 13 C -0.130 4.130 14 C -0.107 4.107 15 C -0.175 4.175 16 Br 0.034 6.966 17 C -0.108 4.108 18 C -0.130 4.130 19 C -0.173 4.173 20 C -0.147 4.147 21 C -0.093 4.093 22 C -0.151 4.151 23 O -0.349 6.349 24 Si 0.582 3.418 25 N -0.150 5.150 26 H 0.100 0.900 27 H 0.084 0.916 28 H 0.125 0.875 29 H 0.235 0.765 30 H 0.114 0.886 31 H 0.095 0.905 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.150 0.850 35 H 0.149 0.851 36 H 0.096 0.904 37 H 0.117 0.883 38 H 0.166 0.834 39 H 0.104 0.896 40 H 0.233 0.767 41 H -0.175 1.175 42 H -0.176 1.176 43 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 2.322 -5.006 -1.643 5.757 hybrid contribution 0.468 -0.403 -0.085 0.624 sum 2.790 -5.409 -1.728 6.326 Atomic orbital electron populations 1.20667 0.86438 1.04655 1.03915 1.20427 0.93841 0.85136 0.99961 1.20063 0.92978 0.91962 1.20006 1.17259 0.85216 0.83877 0.74865 1.90754 1.16562 1.84273 1.50857 1.45413 1.09728 1.04875 1.76053 1.21793 0.99613 0.80179 0.96682 0.87568 1.23583 0.95624 1.00874 0.98219 1.21660 0.97634 0.93200 0.97014 0.88176 1.19857 0.93372 0.95097 0.97097 1.21044 0.99989 0.91788 1.00203 1.21138 0.94254 0.97579 0.97751 1.21848 0.96466 0.91759 1.07399 1.96773 1.91774 1.15722 1.92358 1.21145 0.99261 0.91979 0.98403 1.21093 0.95863 0.96359 0.99640 1.23433 0.98093 1.00013 0.95801 1.21760 0.95677 0.92326 1.04956 1.19215 0.83223 0.94413 1.12498 1.23922 0.93517 1.07254 0.90433 1.86517 1.44963 1.66727 1.36713 0.94559 0.87330 0.79327 0.80566 1.41775 1.05719 1.08367 1.59177 0.89959 0.91579 0.87536 0.76451 0.88648 0.90533 0.84925 0.84917 0.84955 0.85115 0.90353 0.88317 0.83372 0.89573 0.76674 1.17456 1.17552 0.75201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.11 9.88 36.01 0.36 0.25 16 2 C 0.12 0.31 7.17 -81.88 -0.59 -0.28 16 3 C -0.24 -0.72 6.29 -103.35 -0.65 -1.38 16 4 C 0.60 2.17 7.81 -12.59 -0.10 2.07 16 5 O -0.55 -3.52 14.41 5.25 0.08 -3.44 16 6 N -0.71 -0.41 5.26 -54.14 -0.28 -0.69 16 7 C 0.12 -0.01 4.32 -67.11 -0.29 -0.30 16 8 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 9 C -0.14 0.09 7.25 -25.92 -0.19 -0.09 16 10 C -0.08 0.12 3.86 -90.95 -0.35 -0.23 16 11 H 0.10 -0.23 8.09 -51.93 -0.42 -0.65 16 12 C -0.05 0.02 5.29 -104.62 -0.55 -0.53 16 13 C -0.11 0.03 8.60 -39.59 -0.34 -0.32 16 14 C -0.09 -0.06 9.79 -39.56 -0.39 -0.45 16 15 C -0.10 -0.14 6.22 -39.52 -0.25 -0.38 16 16 Br -0.05 -0.09 33.70 -68.01 -2.29 -2.38 16 17 C -0.09 -0.06 9.79 -39.56 -0.39 -0.45 16 18 C -0.11 0.02 9.71 -39.59 -0.38 -0.36 16 19 C -0.14 0.24 7.29 -25.91 -0.19 0.05 16 20 C -0.12 -0.19 10.45 -37.50 -0.39 -0.58 16 21 C 0.01 0.02 6.13 -81.86 -0.50 -0.48 16 22 C -0.04 0.06 2.97 36.00 0.11 0.17 16 23 O -0.54 0.69 12.86 -35.23 -0.45 0.24 16 24 Si 0.68 -1.93 30.96 -169.99 -5.26 -7.19 16 25 N -0.55 -0.73 5.41 -5.42 -0.03 -0.76 16 26 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 27 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.11 0.29 6.46 -51.93 -0.34 -0.05 16 29 H 0.40 -0.60 7.82 -40.82 -0.32 -0.92 16 30 H 0.10 -0.11 6.32 -51.93 -0.33 -0.44 16 31 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.13 -0.24 6.67 -52.48 -0.35 -0.59 16 33 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 34 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 35 H 0.13 -0.27 8.05 -52.48 -0.42 -0.69 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.10 -0.20 7.71 -51.93 -0.40 -0.60 16 38 H 0.15 -0.10 7.70 -52.49 -0.40 -0.50 16 39 H 0.09 -0.30 7.96 -51.93 -0.41 -0.71 16 40 H 0.39 -2.45 8.74 45.56 0.40 -2.06 16 41 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 42 H -0.25 0.12 7.11 56.52 0.40 0.52 16 43 H 0.41 -0.14 6.72 -40.82 -0.27 -0.42 16 LS Contribution 378.04 15.07 5.70 5.70 Total: 0.00 -8.56 378.04 -13.02 -21.58 By element: Atomic # 1 Polarization: -4.38 SS G_CDS: -5.39 Total: -9.77 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -5.08 Total: -3.28 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -0.31 Total: -1.46 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.38 Total: -3.20 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: -5.26 Total: -7.19 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.29 Total: -2.38 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.56 -13.02 -21.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.681 kcal (2) G-P(sol) polarization free energy of solvation -8.557 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.580 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds