Wall clock time and date at job start Sat Mar 6 2021 11:17:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36764 * 125.80315 * 2 1 4 4 C 1.47265 * 126.94220 * 0.04146 * 3 2 1 5 5 O 1.21631 * 120.00022 * 359.97438 * 4 3 2 6 6 N 1.34777 * 120.00073 * 180.02562 * 4 3 2 7 7 C 1.46505 * 119.99640 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.85423 * 336.19987 * 7 6 4 9 9 C 1.53780 * 113.61047 * 107.50520 * 7 6 4 10 10 C 1.53783 * 87.08322 * 89.11192 * 9 7 6 11 11 H 1.09001 * 113.69366 * 270.87171 * 10 9 7 12 12 C 1.50708 * 113.61315 * 139.97752 * 10 9 7 13 13 C 1.38233 * 119.99018 * 322.23247 * 12 10 9 14 14 C 1.38215 * 120.01024 * 179.76751 * 13 12 10 15 15 C 1.38322 * 119.98911 * 0.50479 * 14 13 12 16 16 Br 1.89097 * 120.01386 * 179.76795 * 15 14 13 17 17 C 1.38330 * 119.97914 * 359.74480 * 15 14 13 18 18 C 1.38216 * 119.98820 * 0.02562 * 17 15 14 19 19 C 1.53783 * 113.61237 * 204.99935 * 7 6 4 20 20 C 1.46684 * 106.12005 * 180.02562 * 3 2 1 21 21 C 1.34486 * 106.33174 * 359.97438 * 20 3 2 22 22 C 1.50694 * 125.57638 * 179.97438 * 21 20 3 23 23 O 1.42901 * 109.47118 * 64.99904 * 22 21 20 24 24 Si 1.86298 * 109.47775 * 185.00149 * 22 21 20 25 25 N 1.34665 * 125.79871 * 180.29361 * 2 1 3 26 26 H 1.08997 * 109.47410 * 90.00059 * 1 2 3 27 27 H 1.09001 * 109.46930 * 209.99984 * 1 2 3 28 28 H 1.09000 * 109.46617 * 329.99737 * 1 2 3 29 29 H 0.96997 * 120.00298 * 359.97438 * 6 4 3 30 30 H 1.09004 * 113.61374 * 203.66453 * 9 7 6 31 31 H 1.09005 * 113.61420 * 334.56214 * 9 7 6 32 32 H 1.08004 * 119.99566 * 0.02562 * 13 12 10 33 33 H 1.08001 * 120.00843 * 180.22961 * 14 13 12 34 34 H 1.07998 * 120.00458 * 179.97438 * 17 15 14 35 35 H 1.08004 * 119.99640 * 179.97438 * 18 17 15 36 36 H 1.09001 * 113.61697 * 25.43354 * 19 7 6 37 37 H 1.08996 * 113.61379 * 156.33931 * 19 7 6 38 38 H 1.08002 * 126.83770 * 179.97438 * 20 3 2 39 39 H 1.09004 * 109.47407 * 305.00261 * 22 21 20 40 40 H 0.96708 * 114.00246 * 180.02562 * 23 22 21 41 41 H 1.48506 * 109.99834 * 300.00486 * 24 22 21 42 42 H 1.48502 * 110.00011 * 61.31751 * 24 22 21 43 43 H 0.96994 * 124.85747 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 0.0009 5 8 0.6839 2.7839 0.0012 6 7 2.7851 3.5054 0.0002 7 6 2.3504 4.9044 0.0005 8 1 1.3469 5.0360 -0.4042 9 6 2.5733 5.6184 1.3441 10 6 3.9695 5.9966 0.8220 11 1 4.7365 5.2552 1.0458 12 6 4.3887 7.3990 1.1808 13 6 3.4585 8.4215 1.1732 14 6 3.8415 9.7070 1.5069 15 6 5.1580 9.9721 1.8383 16 35 5.6842 11.7317 2.2885 17 6 6.0896 8.9495 1.8408 18 6 5.7046 7.6635 1.5115 19 6 3.3868 5.8716 -0.5957 20 6 3.6882 0.6151 -0.0006 21 6 3.6096 -0.7274 -0.0004 22 6 4.7819 -1.6743 -0.0014 23 8 5.5114 -1.5305 1.2190 24 14 4.1656 -3.4258 -0.1537 25 7 2.2947 -1.0922 -0.0056 26 1 -0.3634 0.0000 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3632 0.8900 0.5139 29 1 3.7311 3.2914 -0.0004 30 1 1.9174 6.4754 1.4973 31 1 2.5952 4.9427 2.1993 32 1 2.4315 8.2152 0.9105 33 1 3.1140 10.5051 1.5045 34 1 7.1177 9.1561 2.0991 35 1 6.4319 6.8650 1.5130 36 1 4.0655 5.4003 -1.3067 37 1 2.9533 6.7978 -0.9729 38 1 4.5891 1.2109 -0.0012 39 1 5.4342 -1.4441 -0.8438 40 1 6.2820 -2.1108 1.2874 41 1 3.2751 -3.7520 0.9891 42 1 3.4325 -3.5967 -1.4337 43 1 1.9735 -2.0074 -0.0099 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10390340_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 11:17:08 Heat of formation + Delta-G solvation = 35.020050 kcal Electronic energy + Delta-G solvation = -26711.410634 eV Core-core repulsion = 22770.814451 eV Total energy + Delta-G solvation = -3940.596183 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.60635 -41.46209 -40.11994 -38.72143 -37.64808 -34.73047 -33.14951 -32.98626 -32.12352 -31.98797 -30.30072 -29.04333 -26.69327 -26.36476 -25.30367 -24.00335 -23.45996 -22.30869 -21.55583 -20.85625 -20.03289 -18.56250 -18.27132 -17.95152 -17.18620 -16.97636 -16.47491 -16.31971 -16.09032 -15.80620 -15.43046 -15.37685 -15.00861 -14.87609 -14.55606 -14.52512 -14.45984 -14.25734 -14.20305 -13.81846 -13.57924 -13.45910 -13.42371 -12.94655 -12.87952 -12.50500 -12.39908 -12.13845 -12.04109 -11.84818 -11.40821 -11.28225 -11.20620 -11.00796 -10.36496 -10.20441 -10.01170 -9.90189 -9.50646 -9.26344 -5.12130 0.05801 0.32602 0.56858 0.65485 1.09139 1.18847 1.55542 1.79553 1.81852 2.29821 2.42683 2.57048 3.40530 3.46389 3.65606 3.68001 3.72259 3.83310 3.85617 3.95489 3.96203 4.01725 4.07599 4.20534 4.36480 4.39813 4.42214 4.45247 4.57344 4.63933 4.66938 4.71592 4.77947 4.84648 4.90183 4.92134 5.02728 5.05514 5.09904 5.19402 5.23821 5.26226 5.53999 5.59471 5.67696 5.74590 5.84078 6.18762 6.59301 6.90119 7.28465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.109 3.891 3 C -0.260 4.260 4 C 0.592 3.408 5 O -0.584 6.584 6 N -0.697 5.697 7 C 0.116 3.884 8 H 0.087 0.913 9 C -0.143 4.143 10 C -0.066 4.066 11 H 0.113 0.887 12 C -0.056 4.056 13 C -0.115 4.115 14 C -0.099 4.099 15 C -0.110 4.110 16 Br -0.063 7.063 17 C -0.098 4.098 18 C -0.113 4.113 19 C -0.123 4.123 20 C -0.129 4.129 21 C 0.001 3.999 22 C -0.046 4.046 23 O -0.562 6.562 24 Si 0.772 3.228 25 N -0.551 5.551 26 H 0.086 0.914 27 H 0.083 0.917 28 H 0.087 0.913 29 H 0.412 0.588 30 H 0.099 0.901 31 H 0.064 0.936 32 H 0.146 0.854 33 H 0.138 0.862 34 H 0.140 0.860 35 H 0.151 0.849 36 H 0.088 0.912 37 H 0.103 0.897 38 H 0.169 0.831 39 H 0.111 0.889 40 H 0.407 0.593 41 H -0.294 1.294 42 H -0.283 1.283 43 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.790 -6.528 -2.217 9.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.010 4.010 3 C -0.270 4.270 4 C 0.382 3.618 5 O -0.466 6.466 6 N -0.347 5.347 7 C 0.011 3.989 8 H 0.105 0.895 9 C -0.181 4.181 10 C -0.084 4.084 11 H 0.131 0.869 12 C -0.056 4.056 13 C -0.133 4.133 14 C -0.118 4.118 15 C -0.189 4.189 16 Br 0.023 6.977 17 C -0.118 4.118 18 C -0.132 4.132 19 C -0.161 4.161 20 C -0.153 4.153 21 C -0.107 4.107 22 C -0.157 4.157 23 O -0.372 6.372 24 Si 0.676 3.324 25 N -0.151 5.151 26 H 0.104 0.896 27 H 0.102 0.898 28 H 0.106 0.894 29 H 0.249 0.751 30 H 0.118 0.882 31 H 0.083 0.917 32 H 0.164 0.836 33 H 0.156 0.844 34 H 0.157 0.843 35 H 0.168 0.832 36 H 0.106 0.894 37 H 0.121 0.879 38 H 0.186 0.814 39 H 0.129 0.871 40 H 0.259 0.741 41 H -0.221 1.221 42 H -0.210 1.210 43 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 4.036 -5.886 -2.018 7.416 hybrid contribution -0.069 -0.161 0.053 0.183 sum 3.967 -6.047 -1.966 7.494 Atomic orbital electron populations 1.20619 0.86014 1.04544 1.04143 1.20658 0.94463 0.85586 1.00256 1.20227 0.94134 0.91793 1.20865 1.17482 0.85053 0.84679 0.74561 1.90728 1.18095 1.84852 1.52878 1.45316 1.09948 1.04690 1.74777 1.21843 0.99402 0.80144 0.97553 0.89491 1.23568 0.96597 1.00675 0.97303 1.21626 0.97213 0.92845 0.96744 0.86883 1.20009 0.93385 0.95480 0.96759 1.21243 1.00787 0.91514 0.99797 1.21293 0.94222 0.98261 0.98058 1.21978 0.97076 0.91524 1.08364 1.96749 1.91859 1.16638 1.92494 1.21326 0.99588 0.92263 0.98630 1.21350 0.96370 0.96503 0.98935 1.23375 0.97325 0.99510 0.95887 1.22032 0.95587 0.92756 1.04932 1.19834 0.83881 0.95241 1.11710 1.24118 0.93151 1.07150 0.91263 1.86459 1.46175 1.67816 1.36766 0.93561 0.85303 0.77118 0.76377 1.41863 1.05940 1.08439 1.58838 0.89555 0.89808 0.89431 0.75079 0.88234 0.91703 0.83639 0.84427 0.84261 0.83161 0.89374 0.87853 0.81405 0.87147 0.74123 1.22135 1.20983 0.74570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.35 9.88 71.24 0.70 0.35 16 2 C 0.11 0.66 7.17 41.78 0.30 0.96 16 3 C -0.26 -1.81 6.29 -19.04 -0.12 -1.93 16 4 C 0.59 5.07 7.81 86.62 0.68 5.75 16 5 O -0.58 -8.84 14.41 -4.13 -0.06 -8.90 16 6 N -0.70 -1.02 5.26 -443.43 -2.33 -3.35 16 7 C 0.12 0.02 4.32 45.52 0.20 0.22 16 8 H 0.09 0.39 7.46 -2.39 -0.02 0.37 16 9 C -0.14 0.19 7.25 31.12 0.23 0.41 16 10 C -0.07 0.29 3.86 -11.01 -0.04 0.25 16 11 H 0.11 -0.75 8.09 -2.39 -0.02 -0.77 16 12 C -0.06 0.10 5.29 -19.86 -0.11 -0.01 16 13 C -0.11 0.10 8.60 22.26 0.19 0.29 16 14 C -0.10 -0.15 9.79 22.28 0.22 0.07 16 15 C -0.11 -0.34 6.22 22.31 0.14 -0.20 16 16 Br -0.06 -0.25 33.70 -20.37 -0.69 -0.94 16 17 C -0.10 -0.10 9.79 22.29 0.22 0.12 16 18 C -0.11 0.17 9.71 22.26 0.22 0.39 16 19 C -0.12 0.56 7.29 31.12 0.23 0.78 16 20 C -0.13 -0.36 10.45 23.62 0.25 -0.11 16 21 C 0.00 0.00 6.13 40.98 0.25 0.25 16 22 C -0.05 0.21 2.97 71.23 0.21 0.42 16 23 O -0.56 2.32 12.86 -148.98 -1.92 0.41 16 24 Si 0.77 -4.87 30.96 68.60 2.12 -2.75 16 25 N -0.55 -1.73 5.41 -171.07 -0.93 -2.65 16 26 H 0.09 0.20 8.14 -2.39 -0.02 0.18 16 27 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 28 H 0.09 0.69 6.46 -2.39 -0.02 0.67 16 29 H 0.41 -1.48 7.82 -92.71 -0.73 -2.21 16 30 H 0.10 -0.22 6.32 -2.39 -0.02 -0.24 16 31 H 0.06 0.09 8.14 -2.38 -0.02 0.07 16 32 H 0.15 -0.60 6.67 -2.91 -0.02 -0.62 16 33 H 0.14 -0.05 8.06 -2.91 -0.02 -0.08 16 34 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 35 H 0.15 -0.90 8.05 -2.91 -0.02 -0.92 16 36 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 37 H 0.10 -0.51 7.71 -2.39 -0.02 -0.53 16 38 H 0.17 -0.43 7.70 -2.91 -0.02 -0.45 16 39 H 0.11 -1.03 7.96 -2.38 -0.02 -1.05 16 40 H 0.41 -6.01 8.74 -74.05 -0.65 -6.66 16 41 H -0.29 -0.27 7.11 99.48 0.71 0.44 16 42 H -0.28 0.30 7.11 99.48 0.71 1.01 16 43 H 0.41 -0.04 6.72 -92.71 -0.62 -0.67 16 Total: 0.00 -21.48 378.04 -0.92 -22.39 By element: Atomic # 1 Polarization: -11.36 SS G_CDS: -0.88 Total: -12.24 kcal Atomic # 6 Polarization: 4.28 SS G_CDS: 3.75 Total: 8.03 kcal Atomic # 7 Polarization: -2.75 SS G_CDS: -3.26 Total: -6.00 kcal Atomic # 8 Polarization: -6.52 SS G_CDS: -1.97 Total: -8.49 kcal Atomic # 14 Polarization: -4.87 SS G_CDS: 2.12 Total: -2.75 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -0.69 Total: -0.94 kcal Total: -21.48 -0.92 -22.39 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10390340_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.412 kcal (2) G-P(sol) polarization free energy of solvation -21.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.937 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.392 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds