Wall clock time and date at job start Sat Mar 6 2021 13:30:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52997 * 109.47127 * 2 1 4 4 H 1.09002 * 109.47196 * 304.99671 * 3 2 1 5 5 C 1.53000 * 109.47341 * 64.99479 * 3 2 1 6 6 C 1.53001 * 109.47194 * 179.97438 * 5 3 2 7 7 C 1.52990 * 109.47510 * 300.00246 * 6 5 3 8 8 H 1.08997 * 109.47823 * 300.00078 * 7 6 5 9 9 N 1.46503 * 109.47375 * 179.97438 * 7 6 5 10 10 C 1.34779 * 119.99449 * 85.00541 * 9 7 6 11 11 O 1.21278 * 120.00232 * 359.97438 * 10 9 7 12 12 C 1.50703 * 119.99735 * 180.02562 * 10 9 7 13 13 C 1.50703 * 109.46891 * 179.97438 * 12 10 9 14 14 C 1.38233 * 119.99734 * 269.72501 * 13 12 10 15 15 C 1.38241 * 119.99773 * 179.79271 * 14 13 12 16 16 C 1.38236 * 119.99744 * 0.43942 * 15 14 13 17 17 C 1.50702 * 120.00390 * 179.83985 * 16 15 14 18 18 O 1.42902 * 109.46870 * 244.98034 * 17 16 15 19 19 Si 1.86306 * 109.46710 * 4.97332 * 17 16 15 20 20 C 1.38241 * 120.00004 * 359.81092 * 16 15 14 21 21 C 1.38227 * 120.00106 * 359.97438 * 20 16 15 22 22 C 1.53005 * 109.47057 * 60.00027 * 7 6 5 23 23 C 1.52997 * 109.47085 * 299.99980 * 22 7 6 24 24 H 1.09001 * 109.46801 * 300.00272 * 1 2 3 25 25 H 1.09001 * 109.46998 * 59.99868 * 1 2 3 26 26 H 1.09000 * 109.47050 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47002 * 119.99574 * 2 1 3 28 28 H 1.08993 * 109.46955 * 240.00011 * 2 1 3 29 29 H 1.08994 * 109.47725 * 300.00215 * 5 3 2 30 30 H 1.09002 * 109.46818 * 59.99962 * 5 3 2 31 31 H 1.09003 * 109.47255 * 179.97438 * 6 5 3 32 32 H 1.09006 * 109.46733 * 60.00838 * 6 5 3 33 33 H 0.96998 * 120.00248 * 265.00075 * 9 7 6 34 34 H 1.08993 * 109.47370 * 299.99956 * 12 10 9 35 35 H 1.08998 * 109.46985 * 59.99655 * 12 10 9 36 36 H 1.07997 * 120.00450 * 0.02562 * 14 13 12 37 37 H 1.07997 * 120.00414 * 180.28084 * 15 14 13 38 38 H 1.08994 * 109.47428 * 124.97521 * 17 16 15 39 39 H 0.96700 * 113.99917 * 59.99687 * 18 17 16 40 40 H 1.48500 * 109.99804 * 58.68687 * 19 17 16 41 41 H 1.48494 * 109.99867 * 180.02562 * 19 17 16 42 42 H 1.08005 * 119.99637 * 179.97438 * 20 16 15 43 43 H 1.08002 * 120.00343 * 179.97438 * 21 20 16 44 44 H 1.09003 * 109.46928 * 180.02562 * 22 7 6 45 45 H 1.09002 * 109.47110 * 60.00041 * 22 7 6 46 46 H 1.09002 * 109.47196 * 300.00008 * 23 22 7 47 47 H 1.09001 * 109.47630 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9815 -0.8419 5 6 1.6352 2.1266 1.3073 6 6 2.1458 3.5689 1.3075 7 6 3.6705 3.5702 1.1822 8 1 4.1049 3.0310 2.0239 9 7 4.1593 4.9513 1.1818 10 6 4.3840 5.5869 2.3489 11 8 4.1810 5.0157 3.3993 12 6 4.8862 7.0078 2.3486 13 6 5.0531 7.4818 3.7693 14 6 4.0027 8.1033 4.4184 15 6 4.1544 8.5344 5.7231 16 6 5.3594 8.3520 6.3755 17 6 5.5260 8.8251 7.7966 18 8 6.5001 9.8698 7.8397 19 14 3.8971 9.4684 8.4319 20 6 6.4114 7.7351 5.7246 21 6 6.2583 7.3001 4.4215 22 6 4.0754 2.8862 -0.1252 23 6 3.5649 1.4439 -0.1254 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 1.8934 -0.5138 0.8900 28 1 1.8933 -0.5138 -0.8899 29 1 0.5490 2.1253 1.3969 30 1 2.0698 1.5876 2.1491 31 1 1.8570 4.0565 2.2387 32 1 1.7114 4.1082 0.4656 33 1 4.3214 5.4083 0.3416 34 1 5.8464 7.0536 1.8347 35 1 4.1682 7.6468 1.8346 36 1 3.0624 8.2488 3.9075 37 1 3.3324 9.0159 6.2318 38 1 5.8565 7.9942 8.4198 39 1 6.2712 10.6432 7.3064 40 1 2.8674 8.4006 8.3625 41 1 4.0481 9.9386 9.8323 42 1 7.3530 7.5930 6.2343 43 1 7.0803 6.8185 3.9128 44 1 5.1618 2.8867 -0.2143 45 1 3.6411 3.4254 -0.9671 46 1 3.9992 0.9046 0.7164 47 1 3.8529 0.9566 -1.0570 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_12335836.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:30:59 Heat of formation + Delta-G solvation = -71.778333 kcal Electronic energy + Delta-G solvation = -24653.298526 eV Core-core repulsion = 21186.918315 eV Total energy + Delta-G solvation = -3466.380211 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.183 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.29956 -40.42528 -39.36066 -37.58445 -36.05132 -34.10414 -33.33835 -31.89504 -31.82249 -30.17315 -28.77623 -25.81192 -24.51159 -23.77766 -23.69818 -22.21933 -21.63814 -21.30553 -20.71480 -18.41340 -18.05724 -17.54610 -16.93838 -16.58454 -16.25495 -16.08976 -15.87445 -15.66554 -15.45550 -15.02182 -14.87511 -14.65797 -14.47891 -14.40007 -14.29315 -13.99615 -13.85346 -13.29867 -13.19056 -13.17248 -12.82970 -12.74757 -12.55259 -12.34483 -12.16204 -12.14923 -11.91919 -11.72324 -11.65074 -11.49922 -11.29684 -11.08002 -10.76331 -10.37355 -10.00694 -9.81435 -9.56765 -4.99418 0.29247 0.51469 1.34944 1.69676 1.69962 2.02853 2.14718 2.82725 3.50452 3.59294 3.62062 3.63575 3.76908 3.79468 3.88554 3.97533 4.02484 4.06306 4.13086 4.26003 4.28832 4.36150 4.40032 4.41712 4.47408 4.49292 4.50675 4.57284 4.64863 4.69790 4.73118 4.76718 4.96843 4.98383 5.02909 5.07147 5.09633 5.11587 5.11769 5.21612 5.22177 5.28713 5.41536 5.42839 5.50468 5.55029 5.59610 5.63102 6.04820 6.50631 6.61767 7.27913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.121 4.121 3 C -0.089 4.089 4 H 0.071 0.929 5 C -0.113 4.113 6 C -0.128 4.128 7 C 0.145 3.855 8 H 0.087 0.913 9 N -0.731 5.731 10 C 0.514 3.486 11 O -0.527 6.527 12 C -0.104 4.104 13 C -0.062 4.062 14 C -0.100 4.100 15 C -0.114 4.114 16 C -0.119 4.119 17 C -0.068 4.068 18 O -0.540 6.540 19 Si 0.686 3.314 20 C -0.091 4.091 21 C -0.104 4.104 22 C -0.126 4.126 23 C -0.112 4.112 24 H 0.056 0.944 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.062 0.938 28 H 0.062 0.938 29 H 0.068 0.932 30 H 0.064 0.936 31 H 0.066 0.934 32 H 0.063 0.937 33 H 0.400 0.600 34 H 0.104 0.896 35 H 0.105 0.895 36 H 0.124 0.876 37 H 0.126 0.874 38 H 0.113 0.887 39 H 0.378 0.622 40 H -0.258 1.258 41 H -0.255 1.255 42 H 0.125 0.875 43 H 0.122 0.878 44 H 0.069 0.931 45 H 0.068 0.932 46 H 0.065 0.935 47 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.902 2.125 -6.422 6.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.108 4.108 4 H 0.089 0.911 5 C -0.151 4.151 6 C -0.167 4.167 7 C 0.041 3.959 8 H 0.105 0.895 9 N -0.382 5.382 10 C 0.300 3.700 11 O -0.403 6.403 12 C -0.144 4.144 13 C -0.062 4.062 14 C -0.118 4.118 15 C -0.131 4.131 16 C -0.120 4.120 17 C -0.179 4.179 18 O -0.346 6.346 19 Si 0.588 3.412 20 C -0.109 4.109 21 C -0.122 4.122 22 C -0.164 4.164 23 C -0.150 4.150 24 H 0.075 0.925 25 H 0.072 0.928 26 H 0.072 0.928 27 H 0.081 0.919 28 H 0.081 0.919 29 H 0.087 0.913 30 H 0.083 0.917 31 H 0.085 0.915 32 H 0.082 0.918 33 H 0.234 0.766 34 H 0.122 0.878 35 H 0.123 0.877 36 H 0.142 0.858 37 H 0.144 0.856 38 H 0.130 0.870 39 H 0.226 0.774 40 H -0.183 1.183 41 H -0.180 1.180 42 H 0.143 0.857 43 H 0.140 0.860 44 H 0.087 0.913 45 H 0.087 0.913 46 H 0.084 0.916 47 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -1.385 1.195 -4.640 4.988 hybrid contribution 0.454 -0.361 -0.590 0.827 sum -0.931 0.834 -5.230 5.378 Atomic orbital electron populations 1.21831 0.95797 1.01712 1.01927 1.21571 0.96048 0.96126 1.02084 1.21238 0.95218 0.96149 0.98181 0.91077 1.21602 1.01065 0.94903 0.97564 1.21908 0.94958 0.97427 1.02387 1.21003 0.94207 0.81650 0.99021 0.89483 1.46127 1.68429 1.15093 1.08587 1.20574 0.77409 0.88250 0.83776 1.90757 1.50722 1.67622 1.31152 1.20703 1.04069 0.93802 0.95822 1.19266 0.94210 0.98200 0.94562 1.20906 0.98158 0.98181 0.94591 1.20916 0.96446 1.00699 0.95045 1.20310 0.94485 1.00580 0.96586 1.25052 1.03812 0.93241 0.95799 1.86505 1.46874 1.28464 1.72709 0.94831 0.76073 0.87695 0.82595 1.20959 0.98590 0.96946 0.94378 1.21013 0.97061 0.99204 0.94925 1.21804 1.01259 0.96618 0.96696 1.21544 0.95397 0.95561 1.02476 0.92463 0.92776 0.92770 0.91932 0.91950 0.91338 0.91729 0.91484 0.91838 0.76626 0.87750 0.87698 0.85798 0.85638 0.87005 0.77444 1.18267 1.18029 0.85697 0.86027 0.91266 0.91318 0.91580 0.91321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.12 9.67 37.16 0.36 0.48 16 2 C -0.12 0.11 5.40 -26.73 -0.14 -0.04 16 3 C -0.09 0.10 2.19 -90.62 -0.20 -0.10 16 4 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 5 C -0.11 0.04 4.96 -26.73 -0.13 -0.10 16 6 C -0.13 -0.01 5.49 -26.74 -0.15 -0.15 16 7 C 0.15 -0.04 2.45 -67.93 -0.17 -0.20 16 8 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 9 N -0.73 0.88 5.08 -53.81 -0.27 0.61 16 10 C 0.51 0.61 7.79 -10.98 -0.09 0.52 16 11 O -0.53 -3.10 15.70 5.56 0.09 -3.01 16 12 C -0.10 0.16 5.83 -29.03 -0.17 -0.01 16 13 C -0.06 -0.07 4.37 -104.62 -0.46 -0.52 16 14 C -0.10 -0.10 9.70 -39.58 -0.38 -0.49 16 15 C -0.11 -0.11 8.67 -39.58 -0.34 -0.46 16 16 C -0.12 -0.20 5.35 -104.62 -0.56 -0.76 16 17 C -0.07 -0.07 2.80 36.01 0.10 0.03 16 18 O -0.54 -0.63 12.83 -35.23 -0.45 -1.08 16 19 Si 0.69 0.06 29.80 -169.99 -5.07 -5.00 16 20 C -0.09 -0.19 9.69 -39.58 -0.38 -0.57 16 21 C -0.10 -0.17 9.70 -39.59 -0.38 -0.55 16 22 C -0.13 0.24 5.39 -26.73 -0.14 0.10 16 23 C -0.11 0.17 5.20 -26.73 -0.14 0.03 16 24 H 0.06 -0.03 6.56 -51.93 -0.34 -0.38 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 28 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.02 6.56 -51.93 -0.34 -0.36 16 30 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 32 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.40 -1.62 8.60 -40.82 -0.35 -1.97 16 34 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 35 H 0.10 -0.39 8.08 -51.93 -0.42 -0.81 16 36 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 37 H 0.13 -0.13 4.91 -52.49 -0.26 -0.38 16 38 H 0.11 0.19 7.96 -51.93 -0.41 -0.22 16 39 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 40 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 41 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 42 H 0.13 0.19 8.06 -52.48 -0.42 -0.23 16 43 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 44 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 46 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 47 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 371.22 15.07 5.59 5.59 Total: 0.00 -7.49 371.22 -11.57 -19.06 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -8.08 Total: -13.38 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -3.38 Total: -2.79 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.27 Total: 0.61 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.36 Total: -4.09 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: -5.07 Total: -5.00 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -7.49 -11.57 -19.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_12335836.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.721 kcal (2) G-P(sol) polarization free energy of solvation -7.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds