Wall clock time and date at job start Sat Mar 6 2021 13:30:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52997 * 109.47127 * 2 1 4 4 H 1.09002 * 109.47196 * 304.99671 * 3 2 1 5 5 C 1.53000 * 109.47341 * 64.99479 * 3 2 1 6 6 C 1.53001 * 109.47194 * 179.97438 * 5 3 2 7 7 C 1.52990 * 109.47510 * 300.00246 * 6 5 3 8 8 H 1.08997 * 109.47823 * 300.00078 * 7 6 5 9 9 N 1.46503 * 109.47375 * 179.97438 * 7 6 5 10 10 C 1.34779 * 119.99449 * 85.00541 * 9 7 6 11 11 O 1.21278 * 120.00232 * 359.97438 * 10 9 7 12 12 C 1.50703 * 119.99735 * 180.02562 * 10 9 7 13 13 C 1.50703 * 109.46891 * 179.97438 * 12 10 9 14 14 C 1.38233 * 119.99734 * 269.72501 * 13 12 10 15 15 C 1.38241 * 119.99773 * 179.79271 * 14 13 12 16 16 C 1.38236 * 119.99744 * 0.43942 * 15 14 13 17 17 C 1.50702 * 120.00390 * 179.83985 * 16 15 14 18 18 O 1.42902 * 109.46870 * 244.98034 * 17 16 15 19 19 Si 1.86306 * 109.46710 * 4.97332 * 17 16 15 20 20 C 1.38241 * 120.00004 * 359.81092 * 16 15 14 21 21 C 1.38227 * 120.00106 * 359.97438 * 20 16 15 22 22 C 1.53005 * 109.47057 * 60.00027 * 7 6 5 23 23 C 1.52997 * 109.47085 * 299.99980 * 22 7 6 24 24 H 1.09001 * 109.46801 * 300.00272 * 1 2 3 25 25 H 1.09001 * 109.46998 * 59.99868 * 1 2 3 26 26 H 1.09000 * 109.47050 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47002 * 119.99574 * 2 1 3 28 28 H 1.08993 * 109.46955 * 240.00011 * 2 1 3 29 29 H 1.08994 * 109.47725 * 300.00215 * 5 3 2 30 30 H 1.09002 * 109.46818 * 59.99962 * 5 3 2 31 31 H 1.09003 * 109.47255 * 179.97438 * 6 5 3 32 32 H 1.09006 * 109.46733 * 60.00838 * 6 5 3 33 33 H 0.96998 * 120.00248 * 265.00075 * 9 7 6 34 34 H 1.08993 * 109.47370 * 299.99956 * 12 10 9 35 35 H 1.08998 * 109.46985 * 59.99655 * 12 10 9 36 36 H 1.07997 * 120.00450 * 0.02562 * 14 13 12 37 37 H 1.07997 * 120.00414 * 180.28084 * 15 14 13 38 38 H 1.08994 * 109.47428 * 124.97521 * 17 16 15 39 39 H 0.96700 * 113.99917 * 59.99687 * 18 17 16 40 40 H 1.48500 * 109.99804 * 58.68687 * 19 17 16 41 41 H 1.48494 * 109.99867 * 180.02562 * 19 17 16 42 42 H 1.08005 * 119.99637 * 179.97438 * 20 16 15 43 43 H 1.08002 * 120.00343 * 179.97438 * 21 20 16 44 44 H 1.09003 * 109.46928 * 180.02562 * 22 7 6 45 45 H 1.09002 * 109.47110 * 60.00041 * 22 7 6 46 46 H 1.09002 * 109.47196 * 300.00008 * 23 22 7 47 47 H 1.09001 * 109.47630 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9815 -0.8419 5 6 1.6352 2.1266 1.3073 6 6 2.1458 3.5689 1.3075 7 6 3.6705 3.5702 1.1822 8 1 4.1049 3.0310 2.0239 9 7 4.1593 4.9513 1.1818 10 6 4.3840 5.5869 2.3489 11 8 4.1810 5.0157 3.3993 12 6 4.8862 7.0078 2.3486 13 6 5.0531 7.4818 3.7693 14 6 4.0027 8.1033 4.4184 15 6 4.1544 8.5344 5.7231 16 6 5.3594 8.3520 6.3755 17 6 5.5260 8.8251 7.7966 18 8 6.5001 9.8698 7.8397 19 14 3.8971 9.4684 8.4319 20 6 6.4114 7.7351 5.7246 21 6 6.2583 7.3001 4.4215 22 6 4.0754 2.8862 -0.1252 23 6 3.5649 1.4439 -0.1254 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 1.8934 -0.5138 0.8900 28 1 1.8933 -0.5138 -0.8899 29 1 0.5490 2.1253 1.3969 30 1 2.0698 1.5876 2.1491 31 1 1.8570 4.0565 2.2387 32 1 1.7114 4.1082 0.4656 33 1 4.3214 5.4083 0.3416 34 1 5.8464 7.0536 1.8347 35 1 4.1682 7.6468 1.8346 36 1 3.0624 8.2488 3.9075 37 1 3.3324 9.0159 6.2318 38 1 5.8565 7.9942 8.4198 39 1 6.2712 10.6432 7.3064 40 1 2.8674 8.4006 8.3625 41 1 4.0481 9.9386 9.8323 42 1 7.3530 7.5930 6.2343 43 1 7.0803 6.8185 3.9128 44 1 5.1618 2.8867 -0.2143 45 1 3.6411 3.4254 -0.9671 46 1 3.9992 0.9046 0.7164 47 1 3.8529 0.9566 -1.0570 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_12335836.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:30:58 Heat of formation + Delta-G solvation = -67.837819 kcal Electronic energy + Delta-G solvation = -24653.127652 eV Core-core repulsion = 21186.918315 eV Total energy + Delta-G solvation = -3466.209337 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.183 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.34266 -40.44673 -39.39449 -37.64699 -36.08006 -34.14112 -33.31635 -31.94722 -31.78207 -30.17127 -28.74512 -25.85229 -24.48312 -23.82780 -23.67219 -22.24421 -21.62462 -21.32521 -20.67787 -18.46983 -18.06135 -17.57466 -16.97850 -16.60425 -16.31334 -16.10623 -15.91860 -15.61736 -15.50659 -15.01208 -14.91866 -14.72339 -14.51634 -14.37035 -14.27786 -14.11101 -13.82887 -13.28539 -13.19148 -13.11710 -12.81508 -12.75568 -12.50470 -12.32113 -12.26590 -12.10138 -12.01948 -11.72927 -11.67948 -11.45870 -11.27101 -11.05654 -10.85818 -10.45440 -10.03830 -9.88652 -9.62486 -5.05212 0.23130 0.44156 1.28132 1.61107 1.65153 1.92310 2.17653 2.78479 3.49709 3.62622 3.64934 3.69551 3.78588 3.82018 3.90141 4.04591 4.05146 4.07620 4.16495 4.34578 4.35294 4.38341 4.45852 4.47192 4.47517 4.53038 4.53690 4.61325 4.69246 4.71138 4.75266 4.82133 4.99232 5.02544 5.07460 5.07743 5.12052 5.14660 5.17295 5.23994 5.27953 5.31825 5.36832 5.46896 5.52420 5.54498 5.58207 5.58543 6.00880 6.58660 6.75259 7.29830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.121 4.121 3 C -0.083 4.083 4 H 0.078 0.922 5 C -0.112 4.112 6 C -0.122 4.122 7 C 0.147 3.853 8 H 0.056 0.944 9 N -0.716 5.716 10 C 0.511 3.489 11 O -0.583 6.583 12 C -0.098 4.098 13 C -0.071 4.071 14 C -0.111 4.111 15 C -0.122 4.122 16 C -0.129 4.129 17 C -0.076 4.076 18 O -0.555 6.555 19 Si 0.782 3.218 20 C -0.109 4.109 21 C -0.117 4.117 22 C -0.117 4.117 23 C -0.112 4.112 24 H 0.053 0.947 25 H 0.057 0.943 26 H 0.052 0.948 27 H 0.055 0.945 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.049 0.951 31 H 0.041 0.959 32 H 0.077 0.923 33 H 0.417 0.583 34 H 0.129 0.871 35 H 0.134 0.866 36 H 0.142 0.858 37 H 0.143 0.857 38 H 0.100 0.900 39 H 0.395 0.605 40 H -0.294 1.294 41 H -0.297 1.297 42 H 0.122 0.878 43 H 0.131 0.869 44 H 0.074 0.926 45 H 0.086 0.914 46 H 0.054 0.946 47 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.128 2.982 -8.657 9.225 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.102 4.102 4 H 0.097 0.903 5 C -0.150 4.150 6 C -0.160 4.160 7 C 0.042 3.958 8 H 0.074 0.926 9 N -0.368 5.368 10 C 0.299 3.701 11 O -0.462 6.462 12 C -0.137 4.137 13 C -0.071 4.071 14 C -0.129 4.129 15 C -0.139 4.139 16 C -0.129 4.129 17 C -0.185 4.185 18 O -0.363 6.363 19 Si 0.689 3.311 20 C -0.127 4.127 21 C -0.135 4.135 22 C -0.155 4.155 23 C -0.150 4.150 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.071 0.929 27 H 0.073 0.927 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.068 0.932 31 H 0.060 0.940 32 H 0.095 0.905 33 H 0.255 0.745 34 H 0.147 0.853 35 H 0.152 0.848 36 H 0.160 0.840 37 H 0.160 0.840 38 H 0.117 0.883 39 H 0.245 0.755 40 H -0.221 1.221 41 H -0.225 1.225 42 H 0.140 0.860 43 H 0.149 0.851 44 H 0.092 0.908 45 H 0.104 0.896 46 H 0.073 0.927 47 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -1.586 2.077 -6.948 7.423 hybrid contribution 0.527 -0.673 0.126 0.864 sum -1.059 1.404 -6.821 7.044 Atomic orbital electron populations 1.21835 0.95885 1.01663 1.01927 1.21570 0.95973 0.96301 1.01978 1.21188 0.95521 0.95871 0.97601 0.90330 1.21575 1.00914 0.94739 0.97746 1.21832 0.95244 0.97442 1.01528 1.20907 0.93810 0.82069 0.98997 0.92553 1.46013 1.67236 1.14654 1.08927 1.21081 0.76538 0.89122 0.83383 1.90741 1.53283 1.69032 1.33140 1.20768 1.06070 0.92056 0.94785 1.19589 0.93857 0.97724 0.95931 1.21245 0.98943 0.97910 0.94755 1.21160 0.96599 1.00734 0.95398 1.20404 0.94812 1.00940 0.96784 1.25186 1.04557 0.93189 0.95606 1.86460 1.47276 1.29241 1.73307 0.93756 0.73078 0.84908 0.79402 1.21094 0.98846 0.97781 0.94998 1.21235 0.97940 0.99374 0.94945 1.21751 1.01649 0.96170 0.95952 1.21551 0.95018 0.95929 1.02519 0.92838 0.92375 0.92875 0.92660 0.91424 0.91375 0.93235 0.94035 0.90474 0.74541 0.85269 0.84806 0.83995 0.83974 0.88299 0.75457 1.22096 1.22483 0.86032 0.85127 0.90760 0.89564 0.92673 0.90306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.23 9.67 71.98 0.70 0.92 16 2 C -0.12 0.21 5.40 30.60 0.17 0.38 16 3 C -0.08 0.22 2.19 -10.79 -0.02 0.19 16 4 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 5 C -0.11 -0.02 4.96 30.59 0.15 0.13 16 6 C -0.12 -0.07 5.49 30.59 0.17 0.10 16 7 C 0.15 -0.03 2.45 44.99 0.11 0.08 16 8 H 0.06 0.36 7.58 -2.39 -0.02 0.34 16 9 N -0.72 2.22 5.08 -442.53 -2.25 -0.02 16 10 C 0.51 1.18 7.79 87.66 0.68 1.86 16 11 O -0.58 -7.76 15.70 -3.02 -0.05 -7.81 16 12 C -0.10 0.43 5.83 29.10 0.17 0.60 16 13 C -0.07 -0.14 4.37 -19.86 -0.09 -0.22 16 14 C -0.11 -0.19 9.70 22.27 0.22 0.02 16 15 C -0.12 -0.26 8.67 22.27 0.19 -0.07 16 16 C -0.13 -0.55 5.35 -19.86 -0.11 -0.65 16 17 C -0.08 -0.24 2.80 71.24 0.20 -0.04 16 18 O -0.55 -1.61 12.83 -148.98 -1.91 -3.52 16 19 Si 0.78 0.60 29.80 68.60 2.04 2.64 16 20 C -0.11 -0.60 9.69 22.27 0.22 -0.39 16 21 C -0.12 -0.46 9.70 22.27 0.22 -0.24 16 22 C -0.12 0.58 5.39 30.60 0.16 0.74 16 23 C -0.11 0.38 5.20 30.59 0.16 0.54 16 24 H 0.05 -0.04 6.56 -2.39 -0.02 -0.05 16 25 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 26 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 27 H 0.05 -0.02 8.14 -2.39 -0.02 -0.03 16 28 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 29 H 0.07 0.01 6.56 -2.39 -0.02 0.00 16 30 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 31 H 0.04 0.25 8.14 -2.39 -0.02 0.23 16 32 H 0.08 -0.16 8.14 -2.38 -0.02 -0.18 16 33 H 0.42 -4.24 8.60 -92.71 -0.80 -5.04 16 34 H 0.13 -1.21 8.09 -2.39 -0.02 -1.23 16 35 H 0.13 -1.36 8.08 -2.39 -0.02 -1.38 16 36 H 0.14 -0.37 8.06 -2.91 -0.02 -0.40 16 37 H 0.14 -0.33 4.91 -2.91 -0.01 -0.34 16 38 H 0.10 0.53 7.96 -2.39 -0.02 0.51 16 39 H 0.40 -2.25 8.70 -74.06 -0.64 -2.90 16 40 H -0.29 -1.95 7.11 99.48 0.71 -1.24 16 41 H -0.30 -2.25 7.11 99.48 0.71 -1.55 16 42 H 0.12 0.61 8.06 -2.91 -0.02 0.59 16 43 H 0.13 0.12 8.06 -2.91 -0.02 0.09 16 44 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 45 H 0.09 -0.68 8.14 -2.39 -0.02 -0.69 16 46 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 47 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 Total: 0.00 -20.22 371.22 0.68 -19.54 By element: Atomic # 1 Polarization: -14.32 SS G_CDS: -0.45 Total: -14.78 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: 3.29 Total: 3.95 kcal Atomic # 7 Polarization: 2.22 SS G_CDS: -2.25 Total: -0.02 kcal Atomic # 8 Polarization: -9.37 SS G_CDS: -1.96 Total: -11.33 kcal Atomic # 14 Polarization: 0.60 SS G_CDS: 2.04 Total: 2.64 kcal Total: -20.22 0.68 -19.54 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_12335836.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.298 kcal (2) G-P(sol) polarization free energy of solvation -20.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.515 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.540 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.838 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds