Wall clock time and date at job start Sat Mar 6 2021 13:31:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53000 * 109.46867 * 2 1 4 4 H 1.09002 * 109.47398 * 54.99853 * 3 2 1 5 5 C 1.53002 * 109.47233 * 175.00027 * 3 2 1 6 6 C 1.52997 * 109.47415 * 179.97438 * 5 3 2 7 7 C 1.53002 * 109.46978 * 300.00098 * 6 5 3 8 8 H 1.09002 * 109.46838 * 299.99316 * 7 6 5 9 9 N 1.46497 * 109.46729 * 179.97438 * 7 6 5 10 10 C 1.34778 * 119.99664 * 155.00120 * 9 7 6 11 11 O 1.21563 * 120.00246 * 359.97438 * 10 9 7 12 12 C 1.47728 * 119.99732 * 179.97438 * 10 9 7 13 13 C 1.39634 * 120.11691 * 179.72102 * 12 10 9 14 14 C 1.37862 * 119.87780 * 179.79232 * 13 12 10 15 15 C 1.50703 * 119.93635 * 180.23315 * 14 13 12 16 16 O 1.42896 * 109.47297 * 15.23160 * 15 14 13 17 17 Si 1.86303 * 109.46939 * 135.23305 * 15 14 13 18 18 C 1.38627 * 120.11875 * 0.46090 * 14 13 12 19 19 F 1.35102 * 119.88015 * 179.76761 * 18 14 13 20 20 C 1.38684 * 120.24204 * 359.79481 * 18 14 13 21 21 C 1.37817 * 120.11465 * 359.97006 * 20 18 14 22 22 C 1.53002 * 109.47128 * 59.99726 * 7 6 5 23 23 C 1.52992 * 109.47106 * 300.00123 * 22 7 6 24 24 H 1.09000 * 109.47443 * 300.00098 * 1 2 3 25 25 H 1.09001 * 109.47099 * 60.00379 * 1 2 3 26 26 H 1.09004 * 109.46908 * 180.02562 * 1 2 3 27 27 H 1.08990 * 109.47398 * 239.99928 * 2 1 3 28 28 H 1.09001 * 109.47099 * 119.99621 * 2 1 3 29 29 H 1.09000 * 109.46986 * 299.99797 * 5 3 2 30 30 H 1.09002 * 109.47075 * 59.99068 * 5 3 2 31 31 H 1.09002 * 109.47045 * 59.99931 * 6 5 3 32 32 H 1.08998 * 109.47171 * 179.97438 * 6 5 3 33 33 H 0.97000 * 120.00413 * 334.99384 * 9 7 6 34 34 H 1.08002 * 120.06248 * 0.02562 * 13 12 10 35 35 H 1.09004 * 109.46347 * 255.22749 * 15 14 13 36 36 H 0.96691 * 114.00235 * 59.99977 * 16 15 14 37 37 H 1.48499 * 109.99875 * 58.67749 * 17 15 14 38 38 H 1.48500 * 109.99859 * 179.97438 * 17 15 14 39 39 H 1.07996 * 119.94288 * 180.02562 * 20 18 14 40 40 H 1.07995 * 120.05808 * 179.97438 * 21 20 18 41 41 H 1.09002 * 109.47070 * 60.00059 * 22 7 6 42 42 H 1.08996 * 109.46550 * 179.97438 * 22 7 6 43 43 H 1.09002 * 109.47103 * 299.99915 * 23 22 7 44 44 H 1.08998 * 109.46862 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6053 1.9816 0.8418 5 6 3.5648 1.4445 0.1257 6 6 4.0749 2.8869 0.1251 7 6 3.6701 3.5704 -1.1826 8 1 4.1048 3.0310 -2.0241 9 7 4.1579 4.9517 -1.1829 10 6 4.3825 5.5868 -2.3503 11 8 4.1807 5.0132 -3.4029 12 6 4.8739 6.9799 -2.3506 13 6 5.1130 7.6383 -3.5585 14 6 5.5675 8.9398 -3.5531 15 6 5.8209 9.6533 -4.8561 16 8 5.1982 8.9338 -5.9222 17 14 5.1111 11.3737 -4.7702 18 6 5.7962 9.5917 -2.3513 19 9 6.2461 10.8656 -2.3516 20 6 5.5655 8.9408 -1.1486 21 6 5.1066 7.6413 -1.1426 22 6 2.1452 3.5684 -1.3083 23 6 1.6353 2.1260 -1.3076 24 1 -0.3634 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 1.8934 -0.5138 -0.8899 28 1 1.8934 -0.5138 0.8900 29 1 3.8532 0.9572 1.0571 30 1 3.9995 0.9053 -0.7160 31 1 3.6402 3.4263 0.9667 32 1 5.1611 2.8882 0.2151 33 1 4.3192 5.4094 -0.3430 34 1 4.9386 7.1300 -4.4954 35 1 6.8945 9.7117 -5.0354 36 1 4.2402 8.8428 -5.8284 37 1 5.7276 12.1219 -3.6453 38 1 5.3551 12.0882 -6.0490 39 1 5.7449 9.4534 -0.2151 40 1 4.9276 7.1352 -0.2055 41 1 1.7106 4.1079 -0.4667 42 1 1.8569 4.0557 -2.2397 43 1 2.0699 1.5866 -2.1492 44 1 0.5490 2.1247 -1.3976 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:31:40 Heat of formation + Delta-G solvation = -94.227390 kcal Electronic energy + Delta-G solvation = -25417.459447 eV Core-core repulsion = 21636.189416 eV Total energy + Delta-G solvation = -3781.270032 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -50.42418 -41.55921 -40.22513 -39.21728 -37.70769 -36.17107 -33.76621 -32.59178 -31.93915 -31.69273 -29.19917 -27.12182 -25.39796 -24.19836 -23.50873 -23.22554 -21.70128 -21.46757 -20.71686 -19.30454 -18.78725 -18.10869 -17.73126 -17.17140 -17.05309 -16.40363 -16.08201 -15.85002 -15.71622 -15.58641 -15.18461 -15.10527 -14.95488 -14.75052 -14.37499 -14.25266 -14.02881 -13.84255 -13.70515 -13.38585 -13.16724 -12.79968 -12.76009 -12.49194 -12.35168 -12.29916 -12.06140 -11.65116 -11.48611 -11.39983 -11.27965 -11.05661 -10.99583 -10.87120 -10.19504 -10.02298 -9.70833 -5.04828 -0.50782 0.02481 1.20399 1.59370 1.62191 1.93467 2.03689 2.59266 2.99201 3.24620 3.33512 3.57298 3.66431 3.71559 3.73907 3.88528 3.99093 4.08935 4.09753 4.18092 4.34241 4.36911 4.41662 4.50213 4.53728 4.56608 4.59981 4.72251 4.78452 4.79456 4.84776 4.90372 5.00329 5.04437 5.08279 5.12411 5.15277 5.17118 5.21689 5.27524 5.31519 5.34608 5.45108 5.53845 5.60408 5.62284 6.46545 6.59924 7.13451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.121 4.121 3 C -0.084 4.084 4 H 0.078 0.922 5 C -0.112 4.112 6 C -0.119 4.119 7 C 0.146 3.854 8 H 0.063 0.937 9 N -0.707 5.707 10 C 0.559 3.441 11 O -0.576 6.576 12 C -0.150 4.150 13 C -0.030 4.030 14 C -0.157 4.157 15 C -0.072 4.072 16 O -0.551 6.551 17 Si 0.764 3.236 18 C 0.105 3.895 19 F -0.131 7.131 20 C -0.145 4.145 21 C -0.045 4.045 22 C -0.123 4.123 23 C -0.111 4.111 24 H 0.056 0.944 25 H 0.054 0.946 26 H 0.051 0.949 27 H 0.056 0.944 28 H 0.066 0.934 29 H 0.078 0.922 30 H 0.056 0.944 31 H 0.087 0.913 32 H 0.075 0.925 33 H 0.415 0.585 34 H 0.142 0.858 35 H 0.114 0.886 36 H 0.397 0.603 37 H -0.255 1.255 38 H -0.304 1.304 39 H 0.171 0.829 40 H 0.174 0.826 41 H 0.077 0.923 42 H 0.044 0.956 43 H 0.052 0.948 44 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.764 -0.472 7.862 8.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.102 4.102 4 H 0.097 0.903 5 C -0.150 4.150 6 C -0.157 4.157 7 C 0.042 3.958 8 H 0.081 0.919 9 N -0.359 5.359 10 C 0.347 3.653 11 O -0.457 6.457 12 C -0.153 4.153 13 C -0.049 4.049 14 C -0.158 4.158 15 C -0.181 4.181 16 O -0.359 6.359 17 Si 0.667 3.333 18 C 0.085 3.915 19 F -0.109 7.109 20 C -0.163 4.163 21 C -0.063 4.063 22 C -0.162 4.162 23 C -0.149 4.149 24 H 0.075 0.925 25 H 0.073 0.927 26 H 0.070 0.930 27 H 0.074 0.926 28 H 0.085 0.915 29 H 0.097 0.903 30 H 0.075 0.925 31 H 0.106 0.894 32 H 0.093 0.907 33 H 0.254 0.746 34 H 0.159 0.841 35 H 0.131 0.869 36 H 0.247 0.753 37 H -0.180 1.180 38 H -0.232 1.232 39 H 0.189 0.811 40 H 0.191 0.809 41 H 0.096 0.904 42 H 0.063 0.937 43 H 0.071 0.929 44 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -2.119 -0.039 6.902 7.220 hybrid contribution 0.793 -0.001 -0.175 0.812 sum -1.326 -0.040 6.727 6.857 Atomic orbital electron populations 1.21836 0.95928 1.01617 1.01950 1.21567 0.95929 0.96346 1.01975 1.21195 0.95496 0.95852 0.97704 0.90337 1.21545 0.95029 0.95775 1.02616 1.21767 1.01767 0.96289 0.95829 1.21018 0.94124 0.81174 0.99481 0.91864 1.45888 1.66653 1.14950 1.08394 1.18393 0.76848 0.86145 0.83937 1.90798 1.53743 1.68336 1.32778 1.19986 1.06187 0.94211 0.94955 1.20895 0.93327 0.91839 0.98800 1.20267 1.04821 0.95909 0.94844 1.25096 1.01711 1.06548 0.84770 1.86473 1.27405 1.77674 1.44368 0.94330 0.89158 0.72642 0.77125 1.18011 0.99014 0.79609 0.94860 1.91557 1.86623 1.35867 1.96879 1.21398 1.01675 0.95728 0.97532 1.21494 0.93609 0.93325 0.97860 1.21850 0.94863 0.97628 1.01829 1.21574 1.01013 0.94589 0.97765 0.92450 0.92718 0.92970 0.92567 0.91541 0.90329 0.92494 0.89428 0.90667 0.74636 0.84050 0.86884 0.75303 1.18041 1.23248 0.81118 0.80913 0.90395 0.93666 0.92941 0.91275 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.36 9.67 71.98 0.70 1.06 16 2 C -0.12 0.33 5.40 30.60 0.17 0.50 16 3 C -0.08 0.32 2.19 -10.79 -0.02 0.30 16 4 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 5 C -0.11 0.52 5.20 30.59 0.16 0.68 16 6 C -0.12 0.73 5.39 30.59 0.16 0.89 16 7 C 0.15 -0.20 2.45 44.99 0.11 -0.09 16 8 H 0.06 0.29 7.58 -2.39 -0.02 0.28 16 9 N -0.71 2.14 5.03 -445.52 -2.24 -0.10 16 10 C 0.56 2.02 7.73 86.75 0.67 2.69 16 11 O -0.58 -7.37 16.01 -3.92 -0.06 -7.43 16 12 C -0.15 0.01 5.87 -20.09 -0.12 -0.11 16 13 C -0.03 -0.07 8.78 22.52 0.20 0.13 16 14 C -0.16 -0.15 5.13 -19.86 -0.10 -0.26 16 15 C -0.07 -0.11 2.96 71.24 0.21 0.10 16 16 O -0.55 -1.28 11.64 -148.98 -1.73 -3.02 16 17 Si 0.76 0.23 30.81 68.60 2.11 2.34 16 18 C 0.10 -0.01 6.67 22.47 0.15 0.14 16 19 F -0.13 -0.39 12.81 44.97 0.58 0.19 16 20 C -0.14 0.75 10.01 22.28 0.22 0.97 16 21 C -0.04 0.29 9.54 22.52 0.21 0.50 16 22 C -0.12 0.10 5.49 30.59 0.17 0.27 16 23 C -0.11 0.15 4.96 30.59 0.15 0.30 16 24 H 0.06 -0.17 8.14 -2.39 -0.02 -0.18 16 25 H 0.05 -0.10 6.56 -2.39 -0.02 -0.11 16 26 H 0.05 -0.10 8.14 -2.38 -0.02 -0.12 16 27 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 28 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 29 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 30 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 31 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 32 H 0.07 -0.49 8.14 -2.39 -0.02 -0.51 16 33 H 0.42 -4.22 6.63 -92.71 -0.61 -4.84 16 34 H 0.14 0.68 6.67 -2.91 -0.02 0.66 16 35 H 0.11 0.33 7.96 -2.39 -0.02 0.31 16 36 H 0.40 -2.18 8.44 -74.06 -0.62 -2.80 16 37 H -0.25 -1.13 5.27 99.48 0.52 -0.61 16 38 H -0.30 -2.37 7.11 99.48 0.71 -1.66 16 39 H 0.17 -1.73 8.06 -2.91 -0.02 -1.75 16 40 H 0.17 -2.46 6.40 -2.91 -0.02 -2.48 16 41 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 42 H 0.04 0.19 8.14 -2.39 -0.02 0.17 16 43 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 44 H 0.07 -0.09 6.56 -2.39 -0.02 -0.10 16 Total: 0.00 -17.48 348.70 1.32 -16.16 By element: Atomic # 1 Polarization: -15.85 SS G_CDS: -0.37 Total: -16.22 kcal Atomic # 6 Polarization: 5.04 SS G_CDS: 3.04 Total: 8.08 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -2.24 Total: -0.10 kcal Atomic # 8 Polarization: -8.65 SS G_CDS: -1.80 Total: -10.45 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.58 Total: 0.19 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: 2.11 Total: 2.34 kcal Total: -17.48 1.32 -16.16 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.072 kcal (2) G-P(sol) polarization free energy of solvation -17.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.227 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds