Wall clock time and date at job start Sat Mar 6 2021 13:32:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.47161 * 2 1 4 4 H 1.08995 * 109.46928 * 55.00339 * 3 2 1 5 5 C 1.52997 * 109.47241 * 175.00262 * 3 2 1 6 6 C 1.53003 * 109.47241 * 179.97438 * 5 3 2 7 7 C 1.52999 * 109.47087 * 300.00042 * 6 5 3 8 8 H 1.09004 * 109.47434 * 300.00074 * 7 6 5 9 9 N 1.46498 * 109.46963 * 179.97438 * 7 6 5 10 10 C 1.34777 * 119.99828 * 154.72290 * 9 7 6 11 11 O 1.21513 * 119.99898 * 0.28095 * 10 9 7 12 12 C 1.48173 * 120.00085 * 180.27625 * 10 9 7 13 13 N 1.32717 * 119.72294 * 0.02562 * 12 10 9 14 14 C 1.31519 * 121.64303 * 179.97438 * 13 12 10 15 15 C 1.38555 * 120.90142 * 359.97438 * 14 13 12 16 16 C 1.50700 * 120.32146 * 180.02562 * 15 14 13 17 17 O 1.42904 * 109.47208 * 245.00209 * 16 15 14 18 18 Si 1.86298 * 109.47234 * 4.99872 * 16 15 14 19 19 C 1.38623 * 119.35776 * 0.02562 * 15 14 13 20 20 C 1.38591 * 118.48375 * 359.74738 * 19 15 14 21 21 C 1.52997 * 109.47114 * 59.99880 * 7 6 5 22 22 C 1.52999 * 109.47087 * 295.00304 * 3 2 1 23 23 H 1.08996 * 109.47387 * 59.99547 * 1 2 3 24 24 H 1.09003 * 109.47113 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46883 * 299.99550 * 1 2 3 26 26 H 1.09003 * 109.46883 * 240.00450 * 2 1 3 27 27 H 1.08996 * 109.47387 * 120.00453 * 2 1 3 28 28 H 1.09004 * 109.46812 * 60.00212 * 5 3 2 29 29 H 1.08997 * 109.47293 * 300.00108 * 5 3 2 30 30 H 1.08997 * 109.46962 * 180.02562 * 6 5 3 31 31 H 1.08995 * 109.46928 * 60.00077 * 6 5 3 32 32 H 0.97001 * 120.00384 * 335.00737 * 9 7 6 33 33 H 1.08003 * 119.54489 * 179.97438 * 14 13 12 34 34 H 1.08998 * 109.47715 * 125.00113 * 16 15 14 35 35 H 0.96699 * 113.99990 * 60.00102 * 17 16 15 36 36 H 1.48504 * 110.00050 * 58.68569 * 18 16 15 37 37 H 1.48501 * 110.00494 * 180.02562 * 18 16 15 38 38 H 1.07994 * 120.75941 * 179.97438 * 19 15 14 39 39 H 1.08006 * 120.47242 * 180.26106 * 20 19 15 40 40 H 1.09009 * 109.47238 * 59.99946 * 21 7 6 41 41 H 1.08997 * 109.47293 * 179.97438 * 21 7 6 42 42 H 1.08995 * 109.47266 * 299.99829 * 22 3 2 43 43 H 1.09000 * 109.47204 * 59.99887 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 0.8418 5 6 3.5648 1.4444 0.1257 6 6 4.0749 2.8869 0.1250 7 6 3.6701 3.5704 -1.1826 8 1 4.1046 3.0310 -2.0243 9 7 4.1579 4.9517 -1.1829 10 6 4.3879 5.5849 -2.3503 11 8 4.1856 5.0117 -3.4025 12 6 4.8871 6.9800 -2.3507 13 7 5.1065 7.6006 -1.1983 14 6 5.5498 8.8381 -1.1545 15 6 5.8063 9.5437 -2.3191 16 6 6.3145 10.9609 -2.2537 17 8 5.3356 11.8439 -2.8051 18 14 6.6380 11.4233 -0.4783 19 6 5.5907 8.9333 -3.5449 20 6 5.1279 7.6271 -3.5606 21 6 2.1453 3.5685 -1.3083 22 6 1.6352 2.1266 -1.3073 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8901 26 1 1.8933 -0.5138 -0.8901 27 1 1.8933 -0.5139 0.8899 28 1 3.9993 0.9054 -0.7163 29 1 3.8532 0.9570 1.0570 30 1 5.1612 2.8881 0.2141 31 1 3.6403 3.4262 0.9666 32 1 4.3194 5.4093 -0.3430 33 1 5.7163 9.3107 -0.1977 34 1 7.2395 11.0419 -2.8246 35 1 4.4850 11.8244 -2.3456 36 1 7.6310 10.4927 0.1162 37 1 7.1392 12.8191 -0.4001 38 1 5.7827 9.4623 -4.4666 39 1 4.9530 7.1192 -4.4976 40 1 1.7106 4.1080 -0.4666 41 1 1.8568 4.0558 -2.2396 42 1 2.0697 1.5876 -2.1491 43 1 0.5489 2.1253 -1.3968 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:32:19 Heat of formation + Delta-G solvation = -53.036302 kcal Electronic energy + Delta-G solvation = -23027.361048 eV Core-core repulsion = 19651.905261 eV Total energy + Delta-G solvation = -3375.455787 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.162 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.89337 -40.70298 -39.34112 -37.96449 -36.10948 -34.11156 -33.22322 -32.89487 -31.78223 -29.45312 -27.64817 -25.10647 -24.79256 -23.91109 -23.38156 -21.87328 -21.50909 -20.84751 -19.16183 -18.65777 -17.85354 -16.97124 -16.76414 -16.57223 -16.14628 -16.09260 -15.74437 -15.64180 -15.15421 -14.98331 -14.59151 -14.43002 -14.37323 -14.28973 -14.15669 -13.79766 -13.60764 -13.22186 -12.77161 -12.66058 -12.53895 -12.33639 -12.18843 -12.11145 -11.69716 -11.51130 -11.34796 -11.14490 -11.08646 -11.03426 -10.69178 -10.61570 -10.32346 -9.97095 -5.19505 -0.57817 0.03932 1.08335 1.48082 1.65908 1.83777 2.03277 2.70245 2.93688 3.24324 3.41531 3.59208 3.65747 3.67114 3.71415 3.85686 3.90998 4.03686 4.12246 4.15631 4.28187 4.32775 4.39061 4.45126 4.49718 4.51201 4.52718 4.67471 4.72929 4.80362 4.82628 4.94141 5.00512 5.03329 5.09450 5.12316 5.15548 5.24981 5.25218 5.31225 5.33796 5.44593 5.52395 5.56777 6.34019 6.37398 6.64574 7.18014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.120 4.120 3 C -0.090 4.090 4 H 0.071 0.929 5 C -0.111 4.111 6 C -0.126 4.126 7 C 0.144 3.856 8 H 0.090 0.910 9 N -0.707 5.707 10 C 0.572 3.428 11 O -0.529 6.529 12 C 0.081 3.919 13 N -0.453 5.453 14 C 0.104 3.896 15 C -0.151 4.151 16 C -0.067 4.067 17 O -0.536 6.536 18 Si 0.686 3.314 19 C -0.053 4.053 20 C -0.109 4.109 21 C -0.129 4.129 22 C -0.113 4.113 23 H 0.057 0.943 24 H 0.053 0.947 25 H 0.053 0.947 26 H 0.062 0.938 27 H 0.062 0.938 28 H 0.066 0.934 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.411 0.589 33 H 0.164 0.836 34 H 0.120 0.880 35 H 0.381 0.619 36 H -0.253 1.253 37 H -0.249 1.249 38 H 0.147 0.853 39 H 0.153 0.847 40 H 0.065 0.935 41 H 0.067 0.933 42 H 0.065 0.935 43 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.179 0.935 3.718 4.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.109 4.109 4 H 0.090 0.910 5 C -0.149 4.149 6 C -0.164 4.164 7 C 0.040 3.960 8 H 0.108 0.892 9 N -0.357 5.357 10 C 0.357 3.643 11 O -0.404 6.404 12 C -0.057 4.057 13 N -0.164 5.164 14 C -0.055 4.055 15 C -0.153 4.153 16 C -0.178 4.178 17 O -0.341 6.341 18 Si 0.587 3.413 19 C -0.079 4.079 20 C -0.129 4.129 21 C -0.167 4.167 22 C -0.151 4.151 23 H 0.076 0.924 24 H 0.072 0.928 25 H 0.072 0.928 26 H 0.081 0.919 27 H 0.080 0.920 28 H 0.085 0.915 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.247 0.753 33 H 0.181 0.819 34 H 0.137 0.863 35 H 0.229 0.771 36 H -0.177 1.177 37 H -0.173 1.173 38 H 0.165 0.835 39 H 0.170 0.830 40 H 0.083 0.917 41 H 0.086 0.914 42 H 0.083 0.917 43 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -0.414 0.405 3.915 3.958 hybrid contribution 0.496 0.512 -0.936 1.177 sum 0.082 0.917 2.979 3.118 Atomic orbital electron populations 1.21830 0.95812 1.01685 1.01943 1.21568 0.96029 0.96125 1.02077 1.21245 0.95236 0.96145 0.98228 0.91020 1.21541 0.95377 0.95473 1.02515 1.21805 1.01405 0.96587 0.96620 1.21101 0.94431 0.81174 0.99342 0.89218 1.45933 1.66110 1.14835 1.08866 1.17855 0.77609 0.84605 0.84258 1.90815 1.52045 1.66310 1.31271 1.21206 0.99720 0.95052 0.89686 1.67509 1.10366 1.09965 1.28564 1.22590 0.95371 0.90048 0.97510 1.21650 1.00626 0.98321 0.94751 1.25051 0.94732 0.86169 1.11864 1.86542 1.25584 1.62139 1.59853 0.94817 0.88746 0.81059 0.76681 1.21561 0.94261 0.93563 0.98487 1.22235 0.96266 0.94759 0.99659 1.21913 0.94708 0.97541 1.02585 1.21591 1.01100 0.94794 0.97586 0.92441 0.92801 0.92782 0.91927 0.91963 0.91548 0.91272 0.91164 0.91144 0.75317 0.81930 0.86259 0.77135 1.17714 1.17340 0.83499 0.82977 0.91655 0.91380 0.91659 0.91271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.12 9.67 37.16 0.36 0.48 16 2 C -0.12 0.11 5.40 -26.73 -0.14 -0.04 16 3 C -0.09 0.09 2.19 -90.62 -0.20 -0.10 16 4 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 5 C -0.11 0.14 5.20 -26.73 -0.14 0.01 16 6 C -0.13 0.16 5.39 -26.73 -0.14 0.02 16 7 C 0.14 0.06 2.46 -67.93 -0.17 -0.10 16 8 H 0.09 0.20 7.57 -51.93 -0.39 -0.20 16 9 N -0.71 -0.62 5.06 -54.65 -0.28 -0.90 16 10 C 0.57 1.79 7.78 -12.18 -0.09 1.69 16 11 O -0.53 -3.17 15.98 5.35 0.09 -3.09 16 12 C 0.08 0.16 6.75 -83.01 -0.56 -0.40 16 13 N -0.45 -0.41 9.54 -9.80 -0.09 -0.51 16 14 C 0.10 -0.09 9.84 -17.57 -0.17 -0.26 16 15 C -0.15 0.16 5.37 -104.36 -0.56 -0.40 16 16 C -0.07 0.13 2.82 36.01 0.10 0.23 16 17 O -0.54 0.70 12.84 -35.23 -0.45 0.25 16 18 Si 0.69 -1.81 29.83 -169.99 -5.07 -6.88 16 19 C -0.05 0.02 9.83 -39.31 -0.39 -0.36 16 20 C -0.11 -0.11 9.63 -39.05 -0.38 -0.49 16 21 C -0.13 -0.05 5.49 -26.76 -0.15 -0.20 16 22 C -0.11 0.04 4.96 -26.76 -0.13 -0.09 16 23 H 0.06 -0.04 6.56 -51.93 -0.34 -0.38 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.41 -0.22 7.93 -40.82 -0.32 -0.54 16 33 H 0.16 -0.56 4.92 -52.48 -0.26 -0.82 16 34 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 35 H 0.38 -1.94 8.70 45.56 0.40 -1.54 16 36 H -0.25 0.07 7.11 56.52 0.40 0.48 16 37 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 38 H 0.15 -0.26 8.06 -52.49 -0.42 -0.68 16 39 H 0.15 0.11 7.64 -52.48 -0.40 -0.29 16 40 H 0.06 0.00 8.14 -51.92 -0.42 -0.42 16 41 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 42 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 43 H 0.07 -0.03 6.56 -51.93 -0.34 -0.37 16 LS Contribution 343.87 15.07 5.18 5.18 Total: 0.00 -6.09 343.87 -10.16 -16.25 By element: Atomic # 1 Polarization: -3.51 SS G_CDS: -6.77 Total: -10.28 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -2.76 Total: -0.03 kcal Atomic # 7 Polarization: -1.03 SS G_CDS: -0.37 Total: -1.40 kcal Atomic # 8 Polarization: -2.47 SS G_CDS: -0.37 Total: -2.84 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: -5.07 Total: -6.88 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -6.09 -10.16 -16.25 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.786 kcal (2) G-P(sol) polarization free energy of solvation -6.094 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.157 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.250 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds