Wall clock time and date at job start Sat Mar 6 2021 13:32:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52997 * 109.47060 * 2 1 4 4 H 1.09004 * 109.47346 * 305.00346 * 3 2 1 5 5 C 1.53004 * 109.47236 * 65.00086 * 3 2 1 6 6 C 1.52997 * 109.47236 * 180.02562 * 5 3 2 7 7 C 1.52997 * 109.47504 * 300.00184 * 6 5 3 8 8 H 1.09004 * 109.46881 * 300.00361 * 7 6 5 9 9 N 1.46496 * 109.47451 * 180.02562 * 7 6 5 10 10 C 1.34775 * 120.00403 * 84.99700 * 9 7 6 11 11 O 1.21589 * 119.99441 * 0.02562 * 10 9 7 12 12 C 1.47604 * 120.00346 * 180.02562 * 10 9 7 13 13 C 1.39713 * 120.08603 * 180.02562 * 12 10 9 14 14 C 1.37723 * 119.90610 * 179.97438 * 13 12 10 15 15 C 1.50699 * 119.95337 * 179.97438 * 14 13 12 16 16 O 1.42901 * 109.47377 * 105.00242 * 15 14 13 17 17 Si 1.86302 * 109.47141 * 345.00197 * 15 14 13 18 18 C 1.38970 * 120.09318 * 0.02562 * 14 13 12 19 19 O 1.35707 * 119.91586 * 179.97438 * 18 14 13 20 20 C 1.39023 * 120.17390 * 0.02562 * 18 14 13 21 21 C 1.50698 * 119.95532 * 179.97438 * 20 18 14 22 22 C 1.37682 * 120.08947 * 359.68056 * 20 18 14 23 23 C 1.53004 * 109.47024 * 59.99687 * 7 6 5 24 24 C 1.52997 * 109.47504 * 185.00270 * 3 2 1 25 25 H 1.09001 * 109.47194 * 299.99650 * 1 2 3 26 26 H 1.08992 * 109.47399 * 59.99823 * 1 2 3 27 27 H 1.09004 * 109.46724 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47398 * 120.00169 * 2 1 3 29 29 H 1.09001 * 109.47194 * 240.00350 * 2 1 3 30 30 H 1.09001 * 109.46917 * 300.00567 * 5 3 2 31 31 H 1.09004 * 109.46741 * 59.99889 * 5 3 2 32 32 H 1.09002 * 109.47196 * 180.02562 * 6 5 3 33 33 H 1.09004 * 109.46881 * 60.00519 * 6 5 3 34 34 H 0.97005 * 119.99842 * 265.00268 * 9 7 6 35 35 H 1.07995 * 120.04727 * 0.02878 * 13 12 10 36 36 H 1.08997 * 109.47399 * 225.00364 * 15 14 13 37 37 H 0.96693 * 114.00130 * 179.97438 * 16 15 14 38 38 H 1.48502 * 109.99943 * 298.68026 * 17 15 14 39 39 H 1.48499 * 110.00056 * 60.00295 * 17 15 14 40 40 H 0.96692 * 114.00252 * 89.99965 * 19 18 14 41 41 H 1.08994 * 109.47171 * 90.00177 * 21 20 18 42 42 H 1.09000 * 109.47082 * 210.00201 * 21 20 18 43 43 H 1.09007 * 109.47204 * 329.99973 * 21 20 18 44 44 H 1.07998 * 120.04989 * 180.31779 * 22 20 18 45 45 H 1.09001 * 109.46917 * 179.97438 * 23 7 6 46 46 H 1.09004 * 109.46741 * 60.00588 * 23 7 6 47 47 H 1.09004 * 109.46881 * 300.00361 * 24 3 2 48 48 H 1.09002 * 109.47016 * 59.99741 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6053 1.9816 -0.8418 5 6 1.6352 2.1266 1.3074 6 6 2.1447 3.5692 1.3071 7 6 3.6694 3.5717 1.1810 8 1 4.1045 3.0329 2.0228 9 7 4.1572 4.9531 1.1814 10 6 4.3819 5.5882 2.3487 11 8 4.1801 5.0144 3.4015 12 6 4.8728 6.9802 2.3490 13 6 5.1068 7.6400 3.5581 14 6 5.5654 8.9387 3.5541 15 6 5.8176 9.6516 4.8576 16 8 7.2248 9.7281 5.0943 17 14 5.0045 8.7129 6.2463 18 6 5.7949 9.5929 2.3497 19 8 6.2463 10.8727 2.3499 20 6 5.5623 8.9401 1.1445 21 6 5.8123 9.6544 -0.1587 22 6 5.1096 7.6398 1.1399 23 6 4.0742 2.8877 -0.1264 24 6 3.5648 1.4444 -0.1258 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 1.8934 -0.5139 0.8900 29 1 1.8934 -0.5138 -0.8900 30 1 0.5489 2.1251 1.3970 31 1 2.0699 1.5875 2.1492 32 1 1.8567 4.0564 2.2387 33 1 1.7095 4.1080 0.4653 34 1 4.3185 5.4107 0.3414 35 1 4.9292 7.1322 4.4945 36 1 5.4024 10.6582 4.8075 37 1 7.4613 10.1761 5.9179 38 1 3.5367 8.6538 6.0283 39 1 5.5620 7.3388 6.3253 40 1 7.2102 10.9498 2.3492 41 1 6.8415 9.4844 -0.4746 42 1 5.1311 9.2723 -0.9190 43 1 5.6450 10.7232 -0.0251 44 1 4.9340 7.1316 0.2033 45 1 5.1604 2.8899 -0.2164 46 1 3.6391 3.4265 -0.9681 47 1 3.9994 0.9053 0.7160 48 1 3.8531 0.9571 -1.0572 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:32:24 Heat of formation + Delta-G solvation = -108.841630 kcal Electronic energy + Delta-G solvation = -27409.113638 eV Core-core repulsion = 23622.444050 eV Total energy + Delta-G solvation = -3786.669588 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.91473 -40.87401 -39.56857 -37.78794 -37.60940 -36.30819 -34.24228 -33.70595 -31.98264 -31.75322 -29.23445 -28.09558 -26.90670 -25.40928 -24.25388 -23.53105 -22.14032 -21.71278 -21.56684 -20.75785 -19.59828 -18.75236 -18.43181 -18.04606 -16.96749 -16.78258 -16.40771 -16.23816 -15.78752 -15.64031 -15.47431 -15.17193 -15.10666 -15.00211 -14.46686 -14.39242 -14.24878 -14.01470 -13.92630 -13.73770 -13.55849 -13.25120 -13.08320 -12.93551 -12.85292 -12.66818 -12.55158 -12.38893 -12.22080 -12.15337 -11.72377 -11.58130 -11.51749 -11.38374 -11.14936 -11.04515 -10.39484 -10.31394 -10.10654 -9.78122 -5.12028 -0.55199 -0.09411 1.17921 1.42813 1.52538 1.86531 1.89862 2.38570 3.02124 3.20409 3.40527 3.49385 3.58550 3.64773 3.75854 3.79728 3.83535 4.01197 4.05926 4.09379 4.26256 4.28417 4.33103 4.33851 4.42924 4.46072 4.47327 4.53144 4.62086 4.64937 4.71404 4.77272 4.77697 4.89616 4.91324 4.97435 5.01576 5.07397 5.10104 5.11589 5.13123 5.19880 5.21207 5.24822 5.26431 5.34509 5.46513 5.49132 5.54674 6.30252 6.63540 6.82506 6.96321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.120 4.120 3 C -0.084 4.084 4 H 0.079 0.921 5 C -0.110 4.110 6 C -0.124 4.124 7 C 0.144 3.856 8 H 0.062 0.938 9 N -0.703 5.703 10 C 0.557 3.443 11 O -0.585 6.585 12 C -0.154 4.154 13 C -0.083 4.083 14 C -0.125 4.125 15 C -0.058 4.058 16 O -0.556 6.556 17 Si 0.764 3.236 18 C 0.160 3.840 19 O -0.490 6.490 20 C -0.115 4.115 21 C -0.110 4.110 22 C -0.055 4.055 23 C -0.117 4.117 24 C -0.111 4.111 25 H 0.052 0.948 26 H 0.057 0.943 27 H 0.053 0.947 28 H 0.056 0.944 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.051 0.949 32 H 0.038 0.962 33 H 0.078 0.922 34 H 0.416 0.584 35 H 0.111 0.889 36 H 0.098 0.902 37 H 0.406 0.594 38 H -0.299 1.299 39 H -0.303 1.303 40 H 0.415 0.585 41 H 0.088 0.912 42 H 0.088 0.912 43 H 0.075 0.925 44 H 0.169 0.831 45 H 0.076 0.924 46 H 0.088 0.912 47 H 0.057 0.943 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.220 3.472 -5.334 6.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.157 4.157 3 C -0.102 4.102 4 H 0.098 0.902 5 C -0.148 4.148 6 C -0.163 4.163 7 C 0.040 3.960 8 H 0.080 0.920 9 N -0.355 5.355 10 C 0.345 3.655 11 O -0.467 6.467 12 C -0.157 4.157 13 C -0.102 4.102 14 C -0.125 4.125 15 C -0.169 4.169 16 O -0.367 6.367 17 Si 0.673 3.327 18 C 0.114 3.886 19 O -0.304 6.304 20 C -0.116 4.116 21 C -0.167 4.167 22 C -0.073 4.073 23 C -0.155 4.155 24 C -0.149 4.149 25 H 0.071 0.929 26 H 0.076 0.924 27 H 0.072 0.928 28 H 0.074 0.926 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.070 0.930 32 H 0.056 0.944 33 H 0.097 0.903 34 H 0.254 0.746 35 H 0.129 0.871 36 H 0.115 0.885 37 H 0.258 0.742 38 H -0.227 1.227 39 H -0.231 1.231 40 H 0.276 0.724 41 H 0.106 0.894 42 H 0.107 0.893 43 H 0.094 0.906 44 H 0.186 0.814 45 H 0.095 0.905 46 H 0.107 0.893 47 H 0.075 0.925 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.046 2.217 -4.951 5.525 hybrid contribution 0.329 -0.125 -0.124 0.373 sum 1.375 2.092 -5.075 5.659 Atomic orbital electron populations 1.21836 0.95929 1.01693 1.01890 1.21561 0.95924 0.96134 1.02107 1.21200 0.95565 0.96001 0.97467 0.90228 1.21575 1.01011 0.94222 0.98037 1.21864 0.94939 0.97974 1.01521 1.21084 0.94114 0.80923 0.99862 0.91983 1.45866 1.66424 1.15084 1.08089 1.18417 0.76815 0.86174 0.84074 1.90778 1.54275 1.68518 1.33085 1.19836 1.06915 0.94268 0.94701 1.20964 0.97504 0.93902 0.97782 1.19864 1.03381 0.93471 0.95820 1.24416 0.88500 1.05092 0.98885 1.86382 1.19555 1.82736 1.47987 0.94814 0.75679 0.78131 0.84073 1.18365 0.95429 0.84211 0.90551 1.84600 1.29260 1.20436 1.96062 1.20548 1.00516 0.94171 0.96372 1.20795 1.03709 1.00601 0.91558 1.21407 0.95064 0.93715 0.97111 1.21779 1.01893 0.96414 0.95416 1.21555 0.94967 0.95516 1.02824 0.92918 0.92395 0.92802 0.92562 0.91254 0.91226 0.92976 0.94354 0.90307 0.74554 0.87104 0.88457 0.74247 1.22705 1.23146 0.72386 0.89350 0.89349 0.90631 0.81360 0.90501 0.89297 0.92466 0.89905 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.17 9.67 71.98 0.70 0.86 16 2 C -0.12 0.18 5.40 30.59 0.17 0.35 16 3 C -0.08 0.17 2.19 -10.79 -0.02 0.15 16 4 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 5 C -0.11 -0.15 4.96 30.59 0.15 0.00 16 6 C -0.12 -0.37 5.49 30.59 0.17 -0.20 16 7 C 0.14 0.35 2.45 44.99 0.11 0.46 16 8 H 0.06 0.53 7.57 -2.39 -0.02 0.51 16 9 N -0.70 -1.43 5.03 -445.63 -2.24 -3.67 16 10 C 0.56 5.89 7.73 86.72 0.67 6.56 16 11 O -0.59 -11.82 16.00 -4.00 -0.06 -11.88 16 12 C -0.15 -1.23 5.87 -20.08 -0.12 -1.34 16 13 C -0.08 -0.96 8.20 22.50 0.18 -0.77 16 14 C -0.12 -0.90 5.30 -19.81 -0.11 -1.01 16 15 C -0.06 -0.13 2.36 71.24 0.17 0.03 16 16 O -0.56 0.07 12.86 -148.98 -1.92 -1.84 16 17 Si 0.76 2.95 30.20 68.60 2.07 5.02 16 18 C 0.16 0.55 6.66 22.63 0.15 0.70 16 19 O -0.49 0.09 11.84 -90.27 -1.07 -0.98 16 20 C -0.12 -0.02 5.89 -19.81 -0.12 -0.13 16 21 C -0.11 0.63 9.78 71.24 0.70 1.32 16 22 C -0.05 -0.01 9.18 22.51 0.21 0.20 16 23 C -0.12 0.44 5.39 30.61 0.17 0.60 16 24 C -0.11 0.33 5.21 30.61 0.16 0.49 16 25 H 0.05 -0.01 6.57 -2.39 -0.02 -0.02 16 26 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 27 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 28 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.07 0.08 6.56 -2.39 -0.02 0.07 16 31 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 32 H 0.04 0.35 8.14 -2.39 -0.02 0.33 16 33 H 0.08 0.00 8.14 -2.38 -0.02 -0.01 16 34 H 0.42 -2.26 6.63 -92.70 -0.61 -2.87 16 35 H 0.11 1.80 4.47 -2.91 -0.01 1.79 16 36 H 0.10 -0.09 7.82 -2.39 -0.02 -0.10 16 37 H 0.41 -4.22 8.74 -74.06 -0.65 -4.87 16 38 H -0.30 -3.35 7.11 99.48 0.71 -2.64 16 39 H -0.30 -3.99 6.75 99.48 0.67 -3.32 16 40 H 0.42 -3.04 9.06 -74.06 -0.67 -3.71 16 41 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 42 H 0.09 -0.76 8.08 -2.39 -0.02 -0.78 16 43 H 0.07 -0.33 7.52 -2.38 -0.02 -0.35 16 44 H 0.17 -1.35 6.39 -2.91 -0.02 -1.36 16 45 H 0.08 -0.34 8.14 -2.39 -0.02 -0.35 16 46 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 47 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 48 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 Total: 0.00 -24.32 376.79 -0.83 -25.15 By element: Atomic # 1 Polarization: -19.12 SS G_CDS: -0.94 Total: -20.07 kcal Atomic # 6 Polarization: 4.94 SS G_CDS: 3.33 Total: 8.27 kcal Atomic # 7 Polarization: -1.43 SS G_CDS: -2.24 Total: -3.67 kcal Atomic # 8 Polarization: -11.66 SS G_CDS: -3.05 Total: -14.71 kcal Atomic # 14 Polarization: 2.95 SS G_CDS: 2.07 Total: 5.02 kcal Total: -24.32 -0.83 -25.15 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.689 kcal (2) G-P(sol) polarization free energy of solvation -24.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.010 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds