Wall clock time and date at job start Sat Mar 6 2021 13:32:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53009 * 1 3 3 C 1.52999 * 109.46984 * 2 1 4 4 H 1.09000 * 109.47486 * 55.00077 * 3 2 1 5 5 C 1.53006 * 109.46623 * 174.99905 * 3 2 1 6 6 C 1.52999 * 109.46626 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47592 * 300.00035 * 6 5 3 8 8 H 1.09000 * 109.47140 * 300.00346 * 7 6 5 9 9 N 1.46500 * 109.47204 * 180.02562 * 7 6 5 10 10 C 1.34773 * 119.99955 * 85.00142 * 9 7 6 11 11 O 1.21585 * 120.00322 * 0.02562 * 10 9 7 12 12 C 1.47535 * 119.99980 * 180.02562 * 10 9 7 13 13 C 1.40134 * 120.19578 * 179.72156 * 12 10 9 14 14 O 1.35656 * 120.14751 * 359.97438 * 13 12 10 15 15 C 1.38711 * 119.70512 * 179.76731 * 13 12 10 16 16 C 1.50697 * 119.96081 * 180.23119 * 15 13 12 17 17 O 1.42901 * 109.47259 * 75.27639 * 16 15 13 18 18 Si 1.86297 * 109.47208 * 195.27899 * 16 15 13 19 19 C 1.38047 * 120.07979 * 0.50934 * 15 13 12 20 20 C 1.38548 * 120.39298 * 359.74321 * 19 15 13 21 21 C 1.50702 * 119.85212 * 179.97438 * 20 19 15 22 22 C 1.37782 * 120.29987 * 359.97438 * 20 19 15 23 23 C 1.52996 * 109.47165 * 60.00300 * 7 6 5 24 24 C 1.52997 * 109.47269 * 294.99741 * 3 2 1 25 25 H 1.08999 * 109.47112 * 300.00392 * 1 2 3 26 26 H 1.09001 * 109.46642 * 60.00139 * 1 2 3 27 27 H 1.08998 * 109.46901 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46604 * 239.99625 * 2 1 3 29 29 H 1.09001 * 109.46642 * 119.99861 * 2 1 3 30 30 H 1.08993 * 109.46955 * 300.00075 * 5 3 2 31 31 H 1.09000 * 109.47050 * 59.99904 * 5 3 2 32 32 H 1.09000 * 109.47160 * 60.00369 * 6 5 3 33 33 H 1.09002 * 109.46719 * 180.02562 * 6 5 3 34 34 H 0.97001 * 119.99882 * 265.00024 * 9 7 6 35 35 H 0.96700 * 114.00261 * 89.99649 * 14 13 12 36 36 H 1.09006 * 109.47264 * 315.27700 * 16 15 13 37 37 H 0.96702 * 113.99767 * 60.00242 * 17 16 15 38 38 H 1.48499 * 109.99922 * 58.67810 * 18 16 15 39 39 H 1.48497 * 110.00038 * 179.97438 * 18 16 15 40 40 H 1.08004 * 119.80603 * 179.76601 * 19 15 13 41 41 H 1.08991 * 109.47206 * 270.02292 * 21 20 19 42 42 H 1.09005 * 109.47230 * 30.02300 * 21 20 19 43 43 H 1.08999 * 109.47422 * 150.01873 * 21 20 19 44 44 H 1.08000 * 120.04812 * 180.02562 * 22 20 19 45 45 H 1.08992 * 109.47534 * 180.02562 * 23 7 6 46 46 H 1.08996 * 109.47134 * 59.99508 * 23 7 6 47 47 H 1.09000 * 109.47140 * 300.00547 * 24 3 2 48 48 H 1.09001 * 109.47230 * 59.99691 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9816 0.8418 5 6 3.5649 1.4442 0.1258 6 6 4.0750 2.8867 0.1251 7 6 3.6703 3.5703 -1.1825 8 1 4.1049 3.0309 -2.0241 9 7 4.1592 4.9513 -1.1833 10 6 5.4179 5.2203 -1.5828 11 8 6.1476 4.3169 -1.9431 12 6 5.9105 6.6110 -1.5831 13 6 7.2204 6.8946 -1.9922 14 8 8.0424 5.8913 -2.3897 15 6 7.6714 8.2064 -1.9930 16 6 9.0773 8.5186 -2.4368 17 8 9.1587 8.4276 -3.8606 18 14 9.5300 10.2435 -1.8979 19 6 6.8358 9.2256 -1.5824 20 6 5.5417 8.9487 -1.1721 21 6 4.6401 10.0707 -0.7257 22 6 5.0754 7.6522 -1.1705 23 6 2.1455 3.5685 -1.3082 24 6 1.6354 2.1265 -1.3073 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 1.8933 -0.5139 -0.8899 29 1 1.8933 -0.5138 0.8900 30 1 3.8532 0.9569 1.0571 31 1 3.9995 0.9052 -0.7160 32 1 3.6404 3.4261 0.9667 33 1 5.1613 2.8880 0.2142 34 1 3.5770 5.6721 -0.8962 35 1 7.9995 5.6995 -3.3365 36 1 9.7673 7.8046 -1.9871 37 1 8.5702 9.0362 -4.3279 38 1 9.4185 10.3601 -0.4217 39 1 10.9146 10.5633 -2.3291 40 1 7.1927 10.2449 -1.5812 41 1 4.7543 10.2236 0.3474 42 1 4.9096 10.9855 -1.2537 43 1 3.6041 9.8148 -0.9480 44 1 4.0658 7.4411 -0.8503 45 1 1.8572 4.0551 -2.2399 46 1 1.7109 4.1078 -0.4666 47 1 2.0699 1.5875 -2.1491 48 1 0.5490 2.1252 -1.3970 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:32:44 Heat of formation + Delta-G solvation = -109.932009 kcal Electronic energy + Delta-G solvation = -27573.357324 eV Core-core repulsion = 23786.640453 eV Total energy + Delta-G solvation = -3786.716870 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.75894 -40.57136 -39.22355 -37.99753 -37.60616 -35.99002 -33.82003 -33.11653 -32.47162 -31.81676 -29.18557 -27.67279 -26.78774 -25.51692 -24.20829 -23.51313 -22.11473 -21.68084 -21.35013 -20.69872 -19.53627 -18.32587 -18.06606 -17.40106 -16.82158 -16.75799 -16.15492 -16.07372 -15.74085 -15.66925 -15.44419 -15.08381 -14.95326 -14.80988 -14.64985 -14.38798 -14.23134 -14.16198 -13.79622 -13.72638 -13.35240 -13.21646 -13.08139 -12.87276 -12.71725 -12.60115 -12.14400 -12.13136 -12.12085 -12.05156 -11.82229 -11.66996 -11.46701 -11.26462 -11.04417 -10.75221 -10.39633 -10.18551 -9.95970 -9.53583 -5.10231 -0.33716 0.03495 1.22458 1.60374 1.79540 1.94332 2.11898 2.59466 3.20919 3.37321 3.48684 3.53920 3.61296 3.65744 3.67459 3.80490 4.01022 4.04671 4.08445 4.13088 4.26033 4.30953 4.36808 4.45127 4.46995 4.48828 4.51256 4.53228 4.56336 4.62423 4.70689 4.73290 4.78427 4.90014 4.93656 4.94726 5.04834 5.09407 5.11159 5.14428 5.15575 5.19725 5.27078 5.28306 5.29357 5.44700 5.50809 5.54454 5.58033 6.50762 6.51444 6.78844 7.28235 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.121 4.121 3 C -0.090 4.090 4 H 0.071 0.929 5 C -0.112 4.112 6 C -0.129 4.129 7 C 0.147 3.853 8 H 0.089 0.911 9 N -0.726 5.726 10 C 0.559 3.441 11 O -0.517 6.517 12 C -0.164 4.164 13 C 0.190 3.810 14 O -0.473 6.473 15 C -0.153 4.153 16 C -0.063 4.063 17 O -0.537 6.537 18 Si 0.684 3.316 19 C -0.073 4.073 20 C -0.098 4.098 21 C -0.117 4.117 22 C -0.068 4.068 23 C -0.126 4.126 24 C -0.112 4.112 25 H 0.053 0.947 26 H 0.056 0.944 27 H 0.053 0.947 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.066 0.934 31 H 0.065 0.935 32 H 0.063 0.937 33 H 0.068 0.932 34 H 0.397 0.603 35 H 0.400 0.600 36 H 0.119 0.881 37 H 0.377 0.623 38 H -0.256 1.256 39 H -0.252 1.252 40 H 0.137 0.863 41 H 0.075 0.925 42 H 0.073 0.927 43 H 0.071 0.929 44 H 0.131 0.869 45 H 0.069 0.931 46 H 0.068 0.932 47 H 0.066 0.934 48 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.414 5.007 -0.255 8.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.159 4.159 3 C -0.108 4.108 4 H 0.089 0.911 5 C -0.150 4.150 6 C -0.168 4.168 7 C 0.043 3.957 8 H 0.107 0.893 9 N -0.378 5.378 10 C 0.346 3.654 11 O -0.392 6.392 12 C -0.168 4.168 13 C 0.143 3.857 14 O -0.284 6.284 15 C -0.154 4.154 16 C -0.173 4.173 17 O -0.342 6.342 18 Si 0.586 3.414 19 C -0.091 4.091 20 C -0.098 4.098 21 C -0.174 4.174 22 C -0.086 4.086 23 C -0.164 4.164 24 C -0.150 4.150 25 H 0.072 0.928 26 H 0.075 0.925 27 H 0.072 0.928 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.082 0.918 33 H 0.087 0.913 34 H 0.232 0.768 35 H 0.259 0.741 36 H 0.136 0.864 37 H 0.224 0.776 38 H -0.180 1.180 39 H -0.177 1.177 40 H 0.154 0.846 41 H 0.093 0.907 42 H 0.092 0.908 43 H 0.089 0.911 44 H 0.149 0.851 45 H 0.088 0.912 46 H 0.086 0.914 47 H 0.084 0.916 48 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -4.730 4.340 0.683 6.456 hybrid contribution -0.426 -0.312 -0.070 0.533 sum -5.156 4.028 0.613 6.572 Atomic orbital electron populations 1.21831 0.95815 1.01714 1.01865 1.21574 0.95962 0.96150 1.02168 1.21240 0.95463 0.96116 0.97977 0.91093 1.21556 0.95016 0.96046 1.02416 1.21915 1.01640 0.96037 0.97172 1.21018 0.93984 0.81631 0.99057 0.89278 1.46017 1.13915 1.09742 1.68144 1.18028 0.81723 0.88071 0.77559 1.90835 1.55356 1.46652 1.46406 1.20422 0.94717 0.93866 1.07769 1.18239 0.86885 0.86639 0.93910 1.84684 1.61673 1.51709 1.30361 1.20705 0.97971 0.92784 1.03980 1.25017 0.94698 1.12354 0.85232 1.86543 1.66517 1.65349 1.15811 0.95165 0.84478 0.79551 0.82250 1.20980 0.93055 0.98199 0.96871 1.19798 0.94820 0.94890 1.00283 1.20840 0.98453 0.96067 1.01991 1.21130 0.99000 0.91533 0.96977 1.21806 0.93867 0.98245 1.02515 1.21578 1.01096 0.94388 0.97919 0.92795 0.92484 0.92779 0.91899 0.91932 0.91571 0.91611 0.91839 0.91346 0.76787 0.74138 0.86362 0.77589 1.18014 1.17654 0.84606 0.90661 0.90783 0.91052 0.85136 0.91223 0.91364 0.91560 0.91051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.15 9.67 37.16 0.36 0.51 16 2 C -0.12 0.09 5.40 -26.73 -0.14 -0.05 16 3 C -0.09 0.08 2.19 -90.62 -0.20 -0.11 16 4 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 5 C -0.11 0.00 5.20 -26.73 -0.14 -0.14 16 6 C -0.13 -0.10 5.49 -26.73 -0.15 -0.25 16 7 C 0.15 0.05 2.45 -67.93 -0.17 -0.12 16 8 H 0.09 0.22 7.57 -51.93 -0.39 -0.18 16 9 N -0.73 -0.12 5.03 -54.85 -0.28 -0.40 16 10 C 0.56 1.80 7.73 -12.47 -0.10 1.70 16 11 O -0.52 -3.56 14.82 -16.59 -0.25 -3.81 16 12 C -0.16 -0.30 5.89 -104.85 -0.62 -0.92 16 13 C 0.19 0.51 6.69 -38.70 -0.26 0.25 16 14 O -0.47 -1.94 10.90 -40.55 -0.44 -2.38 16 15 C -0.15 -0.10 5.27 -104.52 -0.55 -0.65 16 16 C -0.06 -0.03 2.38 36.00 0.09 0.06 16 17 O -0.54 -0.10 12.88 -35.23 -0.45 -0.55 16 18 Si 0.68 -0.69 29.91 -169.99 -5.08 -5.77 16 19 C -0.07 0.10 8.30 -39.54 -0.33 -0.23 16 20 C -0.10 0.16 5.87 -104.67 -0.61 -0.46 16 21 C -0.12 0.45 10.00 36.01 0.36 0.81 16 22 C -0.07 0.07 9.18 -39.20 -0.36 -0.29 16 23 C -0.13 0.21 5.39 -26.75 -0.14 0.06 16 24 C -0.11 0.15 4.96 -26.75 -0.13 0.02 16 25 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.06 -0.07 6.56 -51.93 -0.34 -0.41 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 30 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.22 8.14 -51.93 -0.42 -0.21 16 34 H 0.40 -1.00 6.63 -40.82 -0.27 -1.27 16 35 H 0.40 0.56 9.06 45.56 0.41 0.97 16 36 H 0.12 0.26 7.82 -51.93 -0.41 -0.14 16 37 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 38 H -0.26 -0.40 7.11 56.52 0.40 0.01 16 39 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 40 H 0.14 -0.52 5.10 -52.48 -0.27 -0.79 16 41 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.07 -0.35 8.08 -51.93 -0.42 -0.77 16 43 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 44 H 0.13 -0.48 6.40 -52.49 -0.34 -0.81 16 45 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 48 H 0.07 -0.13 6.56 -51.93 -0.34 -0.47 16 LS Contribution 376.26 15.07 5.67 5.67 Total: 0.00 -8.05 376.26 -11.00 -19.06 By element: Atomic # 1 Polarization: -4.93 SS G_CDS: -7.08 Total: -12.01 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -3.09 Total: 0.20 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.28 Total: -0.40 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -1.14 Total: -6.74 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.08 Total: -5.77 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -8.05 -11.00 -19.06 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.874 kcal (2) G-P(sol) polarization free energy of solvation -8.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.004 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.932 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds