Wall clock time and date at job start Sat Mar 6 2021 13:32:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53009 * 1 3 3 C 1.52999 * 109.46984 * 2 1 4 4 H 1.09000 * 109.47486 * 55.00077 * 3 2 1 5 5 C 1.53006 * 109.46623 * 174.99905 * 3 2 1 6 6 C 1.52999 * 109.46626 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47592 * 300.00035 * 6 5 3 8 8 H 1.09000 * 109.47140 * 300.00346 * 7 6 5 9 9 N 1.46500 * 109.47204 * 180.02562 * 7 6 5 10 10 C 1.34773 * 119.99955 * 85.00142 * 9 7 6 11 11 O 1.21585 * 120.00322 * 0.02562 * 10 9 7 12 12 C 1.47535 * 119.99980 * 180.02562 * 10 9 7 13 13 C 1.40134 * 120.19578 * 179.72156 * 12 10 9 14 14 O 1.35656 * 120.14751 * 359.97438 * 13 12 10 15 15 C 1.38711 * 119.70512 * 179.76731 * 13 12 10 16 16 C 1.50697 * 119.96081 * 180.23119 * 15 13 12 17 17 O 1.42901 * 109.47259 * 75.27639 * 16 15 13 18 18 Si 1.86297 * 109.47208 * 195.27899 * 16 15 13 19 19 C 1.38047 * 120.07979 * 0.50934 * 15 13 12 20 20 C 1.38548 * 120.39298 * 359.74321 * 19 15 13 21 21 C 1.50702 * 119.85212 * 179.97438 * 20 19 15 22 22 C 1.37782 * 120.29987 * 359.97438 * 20 19 15 23 23 C 1.52996 * 109.47165 * 60.00300 * 7 6 5 24 24 C 1.52997 * 109.47269 * 294.99741 * 3 2 1 25 25 H 1.08999 * 109.47112 * 300.00392 * 1 2 3 26 26 H 1.09001 * 109.46642 * 60.00139 * 1 2 3 27 27 H 1.08998 * 109.46901 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.46604 * 239.99625 * 2 1 3 29 29 H 1.09001 * 109.46642 * 119.99861 * 2 1 3 30 30 H 1.08993 * 109.46955 * 300.00075 * 5 3 2 31 31 H 1.09000 * 109.47050 * 59.99904 * 5 3 2 32 32 H 1.09000 * 109.47160 * 60.00369 * 6 5 3 33 33 H 1.09002 * 109.46719 * 180.02562 * 6 5 3 34 34 H 0.97001 * 119.99882 * 265.00024 * 9 7 6 35 35 H 0.96700 * 114.00261 * 89.99649 * 14 13 12 36 36 H 1.09006 * 109.47264 * 315.27700 * 16 15 13 37 37 H 0.96702 * 113.99767 * 60.00242 * 17 16 15 38 38 H 1.48499 * 109.99922 * 58.67810 * 18 16 15 39 39 H 1.48497 * 110.00038 * 179.97438 * 18 16 15 40 40 H 1.08004 * 119.80603 * 179.76601 * 19 15 13 41 41 H 1.08991 * 109.47206 * 270.02292 * 21 20 19 42 42 H 1.09005 * 109.47230 * 30.02300 * 21 20 19 43 43 H 1.08999 * 109.47422 * 150.01873 * 21 20 19 44 44 H 1.08000 * 120.04812 * 180.02562 * 22 20 19 45 45 H 1.08992 * 109.47534 * 180.02562 * 23 7 6 46 46 H 1.08996 * 109.47134 * 59.99508 * 23 7 6 47 47 H 1.09000 * 109.47140 * 300.00547 * 24 3 2 48 48 H 1.09001 * 109.47230 * 59.99691 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9816 0.8418 5 6 3.5649 1.4442 0.1258 6 6 4.0750 2.8867 0.1251 7 6 3.6703 3.5703 -1.1825 8 1 4.1049 3.0309 -2.0241 9 7 4.1592 4.9513 -1.1833 10 6 5.4179 5.2203 -1.5828 11 8 6.1476 4.3169 -1.9431 12 6 5.9105 6.6110 -1.5831 13 6 7.2204 6.8946 -1.9922 14 8 8.0424 5.8913 -2.3897 15 6 7.6714 8.2064 -1.9930 16 6 9.0773 8.5186 -2.4368 17 8 9.1587 8.4276 -3.8606 18 14 9.5300 10.2435 -1.8979 19 6 6.8358 9.2256 -1.5824 20 6 5.5417 8.9487 -1.1721 21 6 4.6401 10.0707 -0.7257 22 6 5.0754 7.6522 -1.1705 23 6 2.1455 3.5685 -1.3082 24 6 1.6354 2.1265 -1.3073 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 1.8933 -0.5139 -0.8899 29 1 1.8933 -0.5138 0.8900 30 1 3.8532 0.9569 1.0571 31 1 3.9995 0.9052 -0.7160 32 1 3.6404 3.4261 0.9667 33 1 5.1613 2.8880 0.2142 34 1 3.5770 5.6721 -0.8962 35 1 7.9995 5.6995 -3.3365 36 1 9.7673 7.8046 -1.9871 37 1 8.5702 9.0362 -4.3279 38 1 9.4185 10.3601 -0.4217 39 1 10.9146 10.5633 -2.3291 40 1 7.1927 10.2449 -1.5812 41 1 4.7543 10.2236 0.3474 42 1 4.9096 10.9855 -1.2537 43 1 3.6041 9.8148 -0.9480 44 1 4.0658 7.4411 -0.8503 45 1 1.8572 4.0551 -2.2399 46 1 1.7109 4.1078 -0.4666 47 1 2.0699 1.5875 -2.1491 48 1 0.5490 2.1252 -1.3970 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:32:43 Heat of formation + Delta-G solvation = -108.313723 kcal Electronic energy + Delta-G solvation = -27573.287149 eV Core-core repulsion = 23786.640453 eV Total energy + Delta-G solvation = -3786.646696 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.84010 -40.61857 -39.32092 -38.06866 -37.64820 -36.10594 -33.87952 -33.04168 -32.46603 -31.79851 -29.19161 -27.51087 -26.77831 -25.56195 -24.18984 -23.52316 -22.08830 -21.68050 -21.48137 -20.69786 -19.64000 -18.38371 -18.10535 -17.44951 -16.91692 -16.77039 -16.21009 -16.12698 -15.84139 -15.64030 -15.48899 -15.07890 -15.03566 -14.80138 -14.48899 -14.34633 -14.25680 -14.20603 -13.77367 -13.62904 -13.27701 -13.25060 -12.87370 -12.80290 -12.65442 -12.54229 -12.19815 -12.16621 -12.12077 -12.09599 -11.80741 -11.74264 -11.44273 -11.27449 -11.06452 -10.89599 -10.44075 -10.26609 -10.01318 -9.51310 -5.07240 -0.35821 0.05243 1.23468 1.62006 1.70086 1.93485 2.04191 2.54065 3.17351 3.40648 3.50884 3.58507 3.63571 3.69658 3.78741 3.82748 4.04772 4.11782 4.13852 4.18035 4.30875 4.35969 4.37151 4.46483 4.50249 4.51168 4.54022 4.60402 4.68951 4.74484 4.80683 4.83232 4.93135 4.97396 4.99456 5.04168 5.10517 5.14023 5.15088 5.17991 5.22636 5.27299 5.27858 5.31351 5.42909 5.44254 5.50906 5.57163 5.68704 6.45134 6.66573 6.74546 7.14507 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.121 4.121 3 C -0.083 4.083 4 H 0.078 0.922 5 C -0.110 4.110 6 C -0.124 4.124 7 C 0.148 3.852 8 H 0.062 0.938 9 N -0.710 5.710 10 C 0.553 3.447 11 O -0.566 6.566 12 C -0.181 4.181 13 C 0.157 3.843 14 O -0.496 6.496 15 C -0.159 4.159 16 C -0.076 4.076 17 O -0.553 6.553 18 Si 0.797 3.203 19 C -0.070 4.070 20 C -0.093 4.093 21 C -0.118 4.118 22 C -0.062 4.062 23 C -0.117 4.117 24 C -0.111 4.111 25 H 0.056 0.944 26 H 0.061 0.939 27 H 0.051 0.949 28 H 0.057 0.943 29 H 0.059 0.941 30 H 0.065 0.935 31 H 0.053 0.947 32 H 0.075 0.925 33 H 0.036 0.964 34 H 0.413 0.587 35 H 0.402 0.598 36 H 0.090 0.910 37 H 0.396 0.604 38 H -0.284 1.284 39 H -0.300 1.300 40 H 0.165 0.835 41 H 0.081 0.919 42 H 0.089 0.911 43 H 0.083 0.917 44 H 0.159 0.841 45 H 0.077 0.923 46 H 0.086 0.914 47 H 0.056 0.944 48 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.911 7.372 0.371 11.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.159 4.159 3 C -0.102 4.102 4 H 0.096 0.904 5 C -0.149 4.149 6 C -0.162 4.162 7 C 0.044 3.956 8 H 0.080 0.920 9 N -0.362 5.362 10 C 0.342 3.658 11 O -0.446 6.446 12 C -0.185 4.185 13 C 0.111 3.889 14 O -0.308 6.308 15 C -0.160 4.160 16 C -0.184 4.184 17 O -0.362 6.362 18 Si 0.702 3.298 19 C -0.087 4.087 20 C -0.093 4.093 21 C -0.174 4.174 22 C -0.081 4.081 23 C -0.155 4.155 24 C -0.149 4.149 25 H 0.075 0.925 26 H 0.080 0.920 27 H 0.070 0.930 28 H 0.075 0.925 29 H 0.078 0.922 30 H 0.084 0.916 31 H 0.071 0.929 32 H 0.094 0.906 33 H 0.055 0.945 34 H 0.251 0.749 35 H 0.261 0.739 36 H 0.108 0.892 37 H 0.246 0.754 38 H -0.211 1.211 39 H -0.228 1.228 40 H 0.182 0.818 41 H 0.099 0.901 42 H 0.107 0.893 43 H 0.102 0.898 44 H 0.177 0.823 45 H 0.096 0.904 46 H 0.105 0.895 47 H 0.075 0.925 48 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -7.298 6.711 1.303 10.000 hybrid contribution 0.381 -1.063 -0.266 1.160 sum -6.917 5.648 1.037 8.990 Atomic orbital electron populations 1.21821 0.95289 1.01733 1.02236 1.21566 0.96380 0.96151 1.01783 1.21186 0.94216 0.96220 0.98537 0.90371 1.21533 0.96093 0.95369 1.01863 1.21845 0.99682 0.96830 0.97860 1.20985 0.95505 0.81381 0.97727 0.92006 1.45894 1.13159 1.10246 1.66933 1.18389 0.82120 0.88381 0.76939 1.90803 1.56800 1.48143 1.48842 1.20438 0.95042 0.93766 1.09266 1.18622 0.87548 0.87192 0.95545 1.84656 1.62506 1.52820 1.30854 1.20757 0.98257 0.92493 1.04515 1.25250 0.94364 1.13393 0.85432 1.86499 1.67313 1.66475 1.15868 0.94016 0.81054 0.76112 0.78653 1.21321 0.93005 0.98876 0.95543 1.20166 0.94925 0.95348 0.98829 1.20941 0.98518 0.95524 1.02413 1.21446 0.99743 0.91094 0.95799 1.21758 0.91676 0.98379 1.03689 1.21581 1.01711 0.94374 0.97236 0.92474 0.92002 0.92992 0.92451 0.92242 0.91639 0.92852 0.90608 0.94478 0.74906 0.73903 0.89206 0.75434 1.21107 1.22772 0.81772 0.90086 0.89262 0.89772 0.82308 0.90443 0.89546 0.92480 0.89841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.40 9.67 71.99 0.70 1.09 16 2 C -0.12 0.17 5.40 30.60 0.17 0.33 16 3 C -0.08 0.17 2.19 -10.79 -0.02 0.14 16 4 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 5 C -0.11 -0.15 5.20 30.60 0.16 0.00 16 6 C -0.12 -0.36 5.49 30.59 0.17 -0.20 16 7 C 0.15 0.26 2.45 44.99 0.11 0.37 16 8 H 0.06 0.47 7.57 -2.39 -0.02 0.45 16 9 N -0.71 -0.64 5.03 -445.72 -2.24 -2.88 16 10 C 0.55 4.70 7.73 86.70 0.67 5.37 16 11 O -0.57 -9.96 14.82 16.94 0.25 -9.70 16 12 C -0.18 -0.88 5.89 -20.01 -0.12 -0.99 16 13 C 0.16 1.19 6.69 22.84 0.15 1.34 16 14 O -0.50 -6.01 10.90 -68.79 -0.75 -6.76 16 15 C -0.16 -0.33 5.27 -19.80 -0.10 -0.43 16 16 C -0.08 -0.17 2.38 71.24 0.17 0.00 16 17 O -0.55 -0.88 12.88 -148.98 -1.92 -2.80 16 18 Si 0.80 -1.79 29.91 68.60 2.05 0.26 16 19 C -0.07 0.28 8.30 22.30 0.19 0.46 16 20 C -0.09 0.49 5.87 -19.90 -0.12 0.37 16 21 C -0.12 1.30 10.00 71.24 0.71 2.01 16 22 C -0.06 0.19 9.18 22.52 0.21 0.40 16 23 C -0.12 0.49 5.39 30.58 0.16 0.66 16 24 C -0.11 0.36 4.96 30.58 0.15 0.51 16 25 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.06 -0.21 6.56 -2.39 -0.02 -0.23 16 27 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 28 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 32 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 33 H 0.04 0.35 8.14 -2.39 -0.02 0.33 16 34 H 0.41 -2.53 6.63 -92.71 -0.62 -3.15 16 35 H 0.40 2.94 9.06 -74.06 -0.67 2.27 16 36 H 0.09 0.67 7.82 -2.38 -0.02 0.65 16 37 H 0.40 -3.14 8.70 -74.06 -0.64 -3.79 16 38 H -0.28 -0.72 7.11 99.48 0.71 -0.01 16 39 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 40 H 0.17 -1.70 5.10 -2.91 -0.01 -1.71 16 41 H 0.08 -0.91 8.14 -2.39 -0.02 -0.93 16 42 H 0.09 -1.20 8.08 -2.38 -0.02 -1.22 16 43 H 0.08 -1.09 8.08 -2.39 -0.02 -1.11 16 44 H 0.16 -1.55 6.40 -2.91 -0.02 -1.57 16 45 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 46 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 47 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 48 H 0.08 -0.42 6.56 -2.39 -0.02 -0.44 16 Total: 0.00 -23.24 376.26 -0.17 -23.41 By element: Atomic # 1 Polarization: -12.05 SS G_CDS: -0.91 Total: -12.96 kcal Atomic # 6 Polarization: 8.09 SS G_CDS: 3.35 Total: 11.44 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -2.24 Total: -2.88 kcal Atomic # 8 Polarization: -16.85 SS G_CDS: -2.42 Total: -19.26 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: 2.05 Total: 0.26 kcal Total: -23.24 -0.17 -23.41 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.906 kcal (2) G-P(sol) polarization free energy of solvation -23.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.147 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.407 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds