Wall clock time and date at job start Sat Mar 6 2021 13:33:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53004 * 109.47034 * 2 1 4 4 H 1.09003 * 109.46521 * 305.00011 * 3 2 1 5 5 C 1.53001 * 109.46955 * 64.99943 * 3 2 1 6 6 C 1.53000 * 109.46644 * 180.02562 * 5 3 2 7 7 C 1.53002 * 109.47426 * 299.99838 * 6 5 3 8 8 H 1.08998 * 109.46678 * 300.00540 * 7 6 5 9 9 N 1.46496 * 109.47217 * 180.02562 * 7 6 5 10 10 C 1.34777 * 120.00528 * 85.00078 * 9 7 6 11 11 O 1.21284 * 119.99596 * 359.97438 * 10 9 7 12 12 C 1.50689 * 120.00114 * 179.97438 * 10 9 7 13 13 O 1.42900 * 109.47248 * 179.97438 * 12 10 9 14 14 C 1.35992 * 117.00890 * 180.02562 * 13 12 10 15 15 C 1.39150 * 120.07940 * 180.02562 * 14 13 12 16 16 O 1.35988 * 120.07140 * 359.97438 * 15 14 13 17 17 C 1.42903 * 116.99954 * 180.02562 * 16 15 14 18 18 C 1.38570 * 119.85400 * 180.02562 * 15 14 13 19 19 C 1.38238 * 119.99772 * 0.28227 * 18 15 14 20 20 C 1.50703 * 119.92539 * 179.72114 * 19 18 15 21 21 O 1.42895 * 109.47199 * 254.99499 * 20 19 18 22 22 Si 1.86305 * 109.47136 * 14.99504 * 20 19 18 23 23 C 1.38255 * 120.15035 * 359.43655 * 19 18 15 24 24 N 1.47996 * 119.92974 * 180.28528 * 23 19 18 25 25 O 1.21800 * 120.00083 * 180.27726 * 24 23 19 26 26 O 1.21807 * 120.00186 * 0.27640 * 24 23 19 27 27 C 1.38247 * 120.14202 * 0.55875 * 23 19 18 28 28 C 1.52997 * 109.46629 * 60.00180 * 7 6 5 29 29 C 1.52998 * 109.46928 * 185.00159 * 3 2 1 30 30 H 1.09000 * 109.46913 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.47246 * 299.99614 * 1 2 3 32 32 H 1.08994 * 109.47332 * 60.00417 * 1 2 3 33 33 H 1.08994 * 109.47324 * 239.99780 * 2 1 3 34 34 H 1.09000 * 109.47048 * 119.99891 * 2 1 3 35 35 H 1.08997 * 109.47136 * 299.99865 * 5 3 2 36 36 H 1.08997 * 109.47048 * 60.00480 * 5 3 2 37 37 H 1.09005 * 109.46840 * 179.97438 * 6 5 3 38 38 H 1.09004 * 109.47530 * 60.00253 * 6 5 3 39 39 H 0.97004 * 119.99743 * 264.99788 * 9 7 6 40 40 H 1.09002 * 109.47604 * 59.99907 * 12 10 9 41 41 H 1.09000 * 109.47580 * 300.00137 * 12 10 9 42 42 H 1.08992 * 109.47236 * 60.00087 * 17 16 15 43 43 H 1.09005 * 109.47236 * 179.97438 * 17 16 15 44 44 H 1.09000 * 109.46834 * 300.00018 * 17 16 15 45 45 H 1.08002 * 119.99648 * 179.97438 * 18 15 14 46 46 H 1.08999 * 109.47267 * 134.99267 * 20 19 18 47 47 H 0.96708 * 113.99772 * 59.99976 * 21 20 19 48 48 H 1.48495 * 109.99870 * 180.02562 * 22 20 19 49 49 H 1.48500 * 110.00038 * 301.32231 * 22 20 19 50 50 H 1.08001 * 119.99697 * 179.73791 * 27 23 19 51 51 H 1.08998 * 109.47297 * 60.00738 * 28 7 6 52 52 H 1.09010 * 109.46694 * 179.97438 * 28 7 6 53 53 H 1.08992 * 109.47282 * 59.99953 * 29 3 2 54 54 H 1.08998 * 109.46972 * 299.99179 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6053 1.9815 -0.8419 5 6 1.6352 2.1265 1.3074 6 6 2.1447 3.5692 1.3070 7 6 3.6695 3.5717 1.1810 8 1 4.1044 3.0329 2.0228 9 7 4.1573 4.9531 1.1813 10 6 4.3819 5.5883 2.3486 11 8 4.1798 5.0163 3.3988 12 6 4.8843 7.0090 2.3488 13 8 5.0425 7.4581 3.6961 14 6 5.4913 8.7293 3.8746 15 6 5.6691 9.2322 5.1599 16 8 5.3939 8.4535 6.2403 17 6 5.5992 9.0360 7.5289 18 6 6.1261 10.5283 5.3364 19 6 6.3988 11.3208 4.2370 20 6 6.8898 12.7323 4.4308 21 8 5.8298 13.6483 4.1492 22 14 7.4535 12.9574 6.1923 23 6 6.2278 10.8193 2.9600 24 7 6.5272 11.6699 1.7864 25 8 6.3721 11.2312 0.6608 26 8 6.9287 12.8087 1.9462 27 6 5.7722 9.5270 2.7769 28 6 4.0742 2.8876 -0.1263 29 6 3.5648 1.4443 -0.1258 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5137 -0.8900 33 1 1.8934 -0.5138 -0.8899 34 1 1.8933 -0.5138 0.8900 35 1 0.5489 2.1252 1.3969 36 1 2.0699 1.5876 2.1491 37 1 1.8559 4.0567 2.2382 38 1 1.7097 4.1081 0.4652 39 1 4.3187 5.4106 0.3413 40 1 4.1663 7.6483 1.8350 41 1 5.8444 7.0550 1.8349 42 1 4.9666 9.9173 7.6343 43 1 5.3423 8.3105 8.3008 44 1 6.6450 9.3247 7.6347 45 1 6.2645 10.9211 6.3329 46 1 7.7238 12.9229 3.7554 47 1 5.0528 13.5363 4.7140 48 1 7.9395 14.3456 6.3965 49 1 6.3340 12.6693 7.1245 50 1 5.6353 9.1391 1.7783 51 1 3.6393 3.4264 -0.9681 52 1 5.1605 2.8898 -0.2163 53 1 3.8531 0.9571 -1.0571 54 1 3.9994 0.9054 0.7161 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_4549636.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:33:44 Heat of formation + Delta-G solvation = -115.051828 kcal Electronic energy + Delta-G solvation = -37782.175028 eV Core-core repulsion = 32689.999899 eV Total energy + Delta-G solvation = -5092.175129 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.191 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -43.39412 -42.13334 -41.26861 -40.05592 -39.36132 -39.12966 -37.73814 -37.24745 -36.16496 -33.63740 -32.70221 -32.53757 -31.78574 -30.39664 -28.98671 -28.45016 -27.91811 -25.85035 -24.66569 -23.95327 -23.59417 -23.18268 -21.79968 -21.65915 -20.80474 -20.75066 -19.84707 -19.55263 -18.77431 -18.66302 -18.47590 -17.76411 -17.67308 -17.51896 -17.06946 -16.89091 -16.49562 -16.22619 -16.17494 -15.79049 -15.56505 -15.47154 -15.09338 -14.98956 -14.84212 -14.50914 -14.38089 -14.28145 -13.95591 -13.80713 -13.77974 -13.46040 -13.20112 -13.08061 -12.81476 -12.70878 -12.51994 -12.50324 -12.48719 -12.39716 -12.31583 -12.25394 -12.11896 -12.09641 -11.71103 -11.68156 -11.46002 -11.29459 -11.07831 -10.92982 -10.65511 -10.49553 -10.16576 -9.50925 -5.00960 -1.35979 -0.45106 0.16626 0.30764 1.12684 1.23713 1.38543 1.45804 1.86009 1.87295 1.92918 2.33777 2.96627 3.15409 3.24701 3.40249 3.46280 3.49256 3.65508 3.69609 3.83596 3.87824 3.92580 3.93716 4.04598 4.06033 4.08412 4.14784 4.23980 4.30686 4.33630 4.36628 4.38119 4.47321 4.51965 4.52967 4.58840 4.68967 4.70551 4.75328 4.75498 4.81901 5.00092 5.06280 5.12139 5.13987 5.18250 5.24227 5.26859 5.28655 5.30856 5.39646 5.50371 5.56369 5.59092 6.03202 6.39741 6.41981 6.48653 7.07966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.120 4.120 3 C -0.084 4.084 4 H 0.077 0.923 5 C -0.111 4.111 6 C -0.125 4.125 7 C 0.148 3.852 8 H 0.064 0.936 9 N -0.707 5.707 10 C 0.515 3.485 11 O -0.566 6.566 12 C 0.027 3.973 13 O -0.291 6.291 14 C 0.101 3.899 15 C 0.169 3.831 16 O -0.307 6.307 17 C -0.001 4.001 18 C -0.172 4.172 19 C -0.034 4.034 20 C -0.103 4.103 21 O -0.529 6.529 22 Si 0.775 3.225 23 C -0.043 4.043 24 N 0.036 4.964 25 O -0.188 6.188 26 O -0.162 6.162 27 C -0.109 4.109 28 C -0.118 4.118 29 C -0.112 4.112 30 H 0.052 0.948 31 H 0.053 0.947 32 H 0.056 0.944 33 H 0.067 0.933 34 H 0.056 0.944 35 H 0.068 0.932 36 H 0.053 0.947 37 H 0.042 0.958 38 H 0.077 0.923 39 H 0.420 0.580 40 H 0.126 0.874 41 H 0.130 0.870 42 H 0.074 0.926 43 H 0.122 0.878 44 H 0.089 0.911 45 H 0.187 0.813 46 H 0.129 0.871 47 H 0.383 0.617 48 H -0.294 1.294 49 H -0.250 1.250 50 H 0.184 0.816 51 H 0.086 0.914 52 H 0.077 0.923 53 H 0.079 0.921 54 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.823 -3.511 1.106 3.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.103 4.103 4 H 0.096 0.904 5 C -0.149 4.149 6 C -0.163 4.163 7 C 0.044 3.956 8 H 0.082 0.918 9 N -0.360 5.360 10 C 0.301 3.699 11 O -0.444 6.444 12 C -0.050 4.050 13 O -0.204 6.204 14 C 0.054 3.946 15 C 0.120 3.880 16 O -0.219 6.219 17 C -0.094 4.094 18 C -0.191 4.191 19 C -0.036 4.036 20 C -0.210 4.210 21 O -0.336 6.336 22 Si 0.676 3.324 23 C -0.127 4.127 24 N 0.549 4.451 25 O -0.398 6.398 26 O -0.377 6.377 27 C -0.128 4.128 28 C -0.156 4.156 29 C -0.150 4.150 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.075 0.925 33 H 0.085 0.915 34 H 0.075 0.925 35 H 0.086 0.914 36 H 0.071 0.929 37 H 0.061 0.939 38 H 0.095 0.905 39 H 0.258 0.742 40 H 0.144 0.856 41 H 0.148 0.852 42 H 0.093 0.907 43 H 0.140 0.860 44 H 0.108 0.892 45 H 0.204 0.796 46 H 0.147 0.853 47 H 0.232 0.768 48 H -0.221 1.221 49 H -0.175 1.175 50 H 0.201 0.799 51 H 0.105 0.895 52 H 0.096 0.904 53 H 0.097 0.903 54 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges 0.704 -4.067 2.833 5.007 hybrid contribution -1.081 0.947 -1.037 1.772 sum -0.376 -3.121 1.796 3.620 Atomic orbital electron populations 1.21834 0.95977 1.01639 1.01883 1.21566 0.95887 0.96293 1.02046 1.21199 0.95610 0.95885 0.97591 0.90447 1.21573 1.00970 0.94524 0.97864 1.21867 0.95090 0.97719 1.01665 1.21004 0.93936 0.81071 0.99583 0.91808 1.45806 1.66995 1.14988 1.08255 1.20337 0.77430 0.87938 0.84193 1.90779 1.52360 1.68327 1.32978 1.22916 1.05606 0.93559 0.82962 1.86302 1.80731 1.24739 1.28592 1.17961 1.00555 0.85370 0.90708 1.18674 0.93305 0.89766 0.86232 1.86327 1.80578 1.40363 1.14595 1.23747 1.03842 1.01658 0.80157 1.21217 1.05313 0.91969 1.00564 1.20094 0.95557 0.98139 0.89811 1.25791 0.94319 0.83807 1.17040 1.86772 1.28236 1.56427 1.62181 0.94238 0.84558 0.83159 0.70483 1.20532 1.14560 0.92517 0.85087 1.43686 0.97753 1.01175 1.02440 1.94507 1.57466 1.77407 1.10396 1.94575 1.47299 1.03484 1.92327 1.20906 0.99588 0.91392 1.00963 1.21773 1.01906 0.96219 0.95681 1.21555 0.94921 0.95780 1.02704 0.92901 0.92800 0.92509 0.91468 0.92485 0.91382 0.92860 0.93901 0.90451 0.74177 0.85611 0.85240 0.90715 0.85958 0.89219 0.79606 0.85322 0.76802 1.22146 1.17514 0.79914 0.89531 0.90432 0.90263 0.92361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.31 9.67 71.98 0.70 1.00 16 2 C -0.12 0.31 5.40 30.60 0.17 0.47 16 3 C -0.08 0.29 2.19 -10.79 -0.02 0.27 16 4 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 5 C -0.11 0.09 4.96 30.59 0.15 0.25 16 6 C -0.12 0.04 5.49 30.59 0.17 0.21 16 7 C 0.15 -0.22 2.45 44.99 0.11 -0.11 16 8 H 0.06 0.28 7.58 -2.39 -0.02 0.26 16 9 N -0.71 2.88 5.08 -442.55 -2.25 0.64 16 10 C 0.52 1.15 7.87 87.65 0.69 1.84 16 11 O -0.57 -7.68 16.16 16.00 0.26 -7.42 16 12 C 0.03 -0.10 5.22 71.23 0.37 0.27 16 13 O -0.29 -1.12 9.45 -67.05 -0.63 -1.75 16 14 C 0.10 0.10 6.70 22.57 0.15 0.25 16 15 C 0.17 -0.04 6.70 22.57 0.15 0.11 16 16 O -0.31 -0.27 10.28 -79.55 -0.82 -1.08 16 17 C 0.00 0.01 9.81 113.37 1.11 1.12 16 18 C -0.17 0.72 7.65 22.35 0.17 0.89 16 19 C -0.03 0.02 5.26 -19.86 -0.10 -0.09 16 20 C -0.10 0.00 1.74 71.24 0.12 0.13 16 21 O -0.53 -1.79 11.83 -129.82 -1.54 -3.32 16 22 Si 0.77 -4.25 30.24 68.60 2.07 -2.17 16 23 C -0.04 -0.13 6.85 36.39 0.25 0.12 16 24 N 0.04 0.32 4.45 -46.46 -0.21 0.12 16 25 O -0.19 -1.91 18.44 18.89 0.35 -1.56 16 26 O -0.16 -1.95 14.64 25.04 0.37 -1.59 16 27 C -0.11 0.06 8.54 22.35 0.19 0.25 16 28 C -0.12 0.73 5.39 30.61 0.17 0.89 16 29 C -0.11 0.51 5.21 30.61 0.16 0.67 16 30 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 31 H 0.05 -0.07 6.57 -2.39 -0.02 -0.09 16 32 H 0.06 -0.14 8.14 -2.39 -0.02 -0.15 16 33 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 34 H 0.06 -0.08 8.14 -2.39 -0.02 -0.09 16 35 H 0.07 -0.04 6.56 -2.39 -0.02 -0.06 16 36 H 0.05 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.04 0.22 8.14 -2.38 -0.02 0.20 16 38 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.42 -4.82 8.60 -92.71 -0.80 -5.61 16 40 H 0.13 -1.19 7.66 -2.39 -0.02 -1.21 16 41 H 0.13 -1.30 7.67 -2.39 -0.02 -1.32 16 42 H 0.07 -0.80 7.66 -2.39 -0.02 -0.81 16 43 H 0.12 -1.22 8.14 -2.38 -0.02 -1.24 16 44 H 0.09 -1.14 7.66 -2.39 -0.02 -1.15 16 45 H 0.19 -1.79 3.09 -2.91 -0.01 -1.80 16 46 H 0.13 0.32 6.04 -2.39 -0.01 0.30 16 47 H 0.38 -1.61 8.70 -74.05 -0.64 -2.25 16 48 H -0.29 -0.86 7.11 99.48 0.71 -0.15 16 49 H -0.25 1.62 6.68 99.48 0.66 2.28 16 50 H 0.18 -0.94 5.85 -2.91 -0.02 -0.96 16 51 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 52 H 0.08 -0.53 8.14 -2.38 -0.02 -0.55 16 53 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 54 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 Total: 0.00 -28.13 430.96 1.82 -26.31 By element: Atomic # 1 Polarization: -16.23 SS G_CDS: -0.49 Total: -16.71 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: 4.70 Total: 8.55 kcal Atomic # 7 Polarization: 3.21 SS G_CDS: -2.45 Total: 0.75 kcal Atomic # 8 Polarization: -14.71 SS G_CDS: -2.01 Total: -16.72 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: 2.07 Total: -2.17 kcal Total: -28.13 1.82 -26.31 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_4549636.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.746 kcal (2) G-P(sol) polarization free energy of solvation -28.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds