Wall clock time and date at job start Sat Mar 6 2021 13:34:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53001 * 109.47346 * 2 1 4 4 H 1.09005 * 109.46955 * 305.00076 * 3 2 1 5 5 C 1.53006 * 109.47082 * 64.99747 * 3 2 1 6 6 C 1.53001 * 109.47082 * 180.02562 * 5 3 2 7 7 C 1.53002 * 109.47259 * 300.00241 * 6 5 3 8 8 H 1.09000 * 109.46788 * 299.99796 * 7 6 5 9 9 N 1.46501 * 109.47063 * 179.97438 * 7 6 5 10 10 C 1.34774 * 119.99540 * 84.99994 * 9 7 6 11 11 O 1.21277 * 120.00605 * 359.97438 * 10 9 7 12 12 C 1.50706 * 119.99821 * 180.02562 * 10 9 7 13 13 O 1.42891 * 109.47373 * 179.97438 * 12 10 9 14 14 C 1.35899 * 117.00352 * 179.97438 * 13 12 10 15 15 C 1.38748 * 120.02867 * 180.02562 * 14 13 12 16 16 C 1.50700 * 119.97479 * 359.97438 * 15 14 13 17 17 O 1.42894 * 109.47252 * 284.99695 * 16 15 14 18 18 Si 1.86300 * 109.46973 * 164.99838 * 16 15 14 19 19 C 1.38198 * 120.05244 * 179.97438 * 15 14 13 20 20 C 1.38150 * 120.11079 * 0.04429 * 19 15 14 21 21 C 1.38794 * 120.05479 * 359.95320 * 20 19 15 22 22 O 1.35899 * 120.02761 * 180.29443 * 21 20 19 23 23 C 1.42902 * 117.00042 * 359.73580 * 22 21 20 24 24 C 1.38615 * 119.94440 * 0.02746 * 21 20 19 25 25 C 1.53002 * 109.46951 * 60.00010 * 7 6 5 26 26 C 1.53001 * 109.47286 * 299.99707 * 25 7 6 27 27 H 1.08994 * 109.47464 * 180.02562 * 1 2 3 28 28 H 1.09006 * 109.47220 * 300.00266 * 1 2 3 29 29 H 1.09001 * 109.47184 * 59.99695 * 1 2 3 30 30 H 1.09002 * 109.47490 * 240.00143 * 2 1 3 31 31 H 1.08999 * 109.47409 * 119.99815 * 2 1 3 32 32 H 1.09002 * 109.47069 * 300.00220 * 5 3 2 33 33 H 1.08997 * 109.46661 * 60.00427 * 5 3 2 34 34 H 1.08995 * 109.47297 * 179.97438 * 6 5 3 35 35 H 1.09005 * 109.46955 * 60.00329 * 6 5 3 36 36 H 0.96997 * 119.99784 * 265.00068 * 9 7 6 37 37 H 1.09001 * 109.46876 * 59.99595 * 12 10 9 38 38 H 1.09009 * 109.46854 * 300.00273 * 12 10 9 39 39 H 1.09001 * 109.46809 * 45.00184 * 16 15 14 40 40 H 0.96701 * 114.00589 * 300.00651 * 17 16 15 41 41 H 1.48494 * 109.99960 * 58.68358 * 18 16 15 42 42 H 1.48499 * 109.99771 * 180.02562 * 18 16 15 43 43 H 1.08000 * 119.94719 * 180.02562 * 19 15 14 44 44 H 1.08001 * 119.97703 * 179.97438 * 20 19 15 45 45 H 1.08998 * 109.46791 * 179.97438 * 23 22 21 46 46 H 1.09004 * 109.46420 * 299.99136 * 23 22 21 47 47 H 1.08993 * 109.47450 * 59.99009 * 23 22 21 48 48 H 1.08003 * 120.04971 * 179.97438 * 24 21 20 49 49 H 1.09000 * 109.47549 * 60.00252 * 25 7 6 50 50 H 1.09002 * 109.46749 * 180.02562 * 25 7 6 51 51 H 1.08995 * 109.47453 * 180.02562 * 26 25 7 52 52 H 1.09000 * 109.47271 * 300.00715 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8419 5 6 1.6352 2.1266 1.3074 6 6 2.1447 3.5693 1.3071 7 6 3.6696 3.5716 1.1811 8 1 4.1045 3.0329 2.0229 9 7 4.1573 4.9531 1.1802 10 6 4.3819 5.5891 2.3470 11 8 4.1798 5.0180 3.3977 12 6 4.8831 7.0103 2.3462 13 8 5.0415 7.4604 3.6931 14 6 5.4901 8.7309 3.8705 15 6 5.6671 9.2322 5.1520 16 6 5.3613 8.3674 6.3477 17 8 3.9455 8.2670 6.5133 18 14 6.1125 9.1286 7.8731 19 6 6.1238 10.5239 5.3330 20 6 6.4042 11.3195 4.2389 21 6 6.2287 10.8226 2.9549 22 8 6.5104 11.6037 1.8790 23 6 6.9778 12.9280 2.1434 24 6 5.7712 9.5272 2.7708 25 6 4.0743 2.8876 -0.1263 26 6 3.5649 1.4449 -0.1260 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 1.8934 -0.5138 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 0.5489 2.1253 1.3969 33 1 2.0699 1.5875 2.1491 34 1 1.8560 4.0568 2.2382 35 1 1.7097 4.1081 0.4653 36 1 4.3186 5.4099 0.3399 37 1 4.1644 7.6487 1.8323 38 1 5.8431 7.0567 1.8319 39 1 5.7806 7.3731 6.1937 40 1 3.5048 9.1160 6.6550 41 1 5.5727 10.4970 8.0763 42 1 5.8184 8.2849 9.0592 43 1 6.2614 10.9122 6.3313 44 1 6.7605 12.3288 4.3828 45 1 7.1649 13.4421 1.2006 46 1 6.2236 13.4728 2.7113 47 1 7.9016 12.8790 2.7197 48 1 5.6337 9.1390 1.7724 49 1 3.6393 3.4263 -0.9681 50 1 5.1606 2.8889 -0.2158 51 1 3.8535 0.9574 -1.0572 52 1 3.9998 0.9061 0.7158 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:34:07 Heat of formation + Delta-G solvation = -127.407919 kcal Electronic energy + Delta-G solvation = -31236.221003 eV Core-core repulsion = 26974.526509 eV Total energy + Delta-G solvation = -4261.694494 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -41.87155 -41.16143 -40.09958 -39.39714 -38.35735 -37.02859 -36.16148 -33.62101 -32.31823 -31.81862 -31.46180 -30.11864 -28.54825 -28.25917 -26.14395 -24.73297 -23.90581 -23.40572 -22.50664 -21.74091 -21.63234 -20.75361 -19.97597 -18.66333 -18.16308 -17.87500 -17.54661 -17.36828 -16.97369 -16.68115 -16.50262 -16.23708 -16.01483 -15.73321 -15.52332 -15.35885 -15.18614 -14.97903 -14.75899 -14.51277 -14.38519 -14.27428 -13.85982 -13.75881 -13.49529 -13.34892 -13.21646 -13.14765 -12.82581 -12.52831 -12.49941 -12.34296 -12.30636 -12.11486 -12.04421 -11.69438 -11.66822 -11.63570 -11.46270 -11.29259 -11.08599 -10.90773 -10.52502 -10.16707 -9.71624 -9.11739 -4.93651 0.18777 0.29427 1.30831 1.40472 1.43316 1.55054 1.95634 2.24028 2.54480 2.57180 3.47462 3.48721 3.64258 3.68347 3.71155 3.79087 3.83664 3.93035 4.00660 4.04907 4.05494 4.13796 4.15861 4.31907 4.33836 4.36683 4.39455 4.42184 4.45368 4.46301 4.51066 4.51522 4.64928 4.67979 4.74355 4.78677 4.80719 4.98893 5.01190 5.04990 5.11012 5.12992 5.16638 5.22281 5.23002 5.26555 5.27493 5.29983 5.39937 5.46475 5.49550 5.57303 6.12003 6.34939 6.43788 6.56276 7.10287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.120 4.120 3 C -0.084 4.084 4 H 0.079 0.921 5 C -0.111 4.111 6 C -0.125 4.125 7 C 0.148 3.852 8 H 0.061 0.939 9 N -0.707 5.707 10 C 0.513 3.487 11 O -0.569 6.569 12 C 0.035 3.965 13 O -0.303 6.303 14 C 0.176 3.824 15 C -0.196 4.196 16 C -0.079 4.079 17 O -0.550 6.550 18 Si 0.783 3.217 19 C -0.041 4.041 20 C -0.237 4.237 21 C 0.165 3.835 22 O -0.330 6.330 23 C 0.016 3.984 24 C -0.252 4.252 25 C -0.117 4.117 26 C -0.112 4.112 27 H 0.053 0.947 28 H 0.052 0.948 29 H 0.057 0.943 30 H 0.068 0.932 31 H 0.055 0.945 32 H 0.068 0.932 33 H 0.051 0.949 34 H 0.038 0.962 35 H 0.078 0.922 36 H 0.420 0.580 37 H 0.118 0.882 38 H 0.125 0.875 39 H 0.096 0.904 40 H 0.381 0.619 41 H -0.261 1.261 42 H -0.308 1.308 43 H 0.156 0.844 44 H 0.158 0.842 45 H 0.117 0.883 46 H 0.067 0.933 47 H 0.071 0.929 48 H 0.153 0.847 49 H 0.087 0.913 50 H 0.077 0.923 51 H 0.081 0.919 52 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.847 4.974 -7.060 9.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.102 4.102 4 H 0.097 0.903 5 C -0.149 4.149 6 C -0.163 4.163 7 C 0.044 3.956 8 H 0.079 0.921 9 N -0.361 5.361 10 C 0.299 3.701 11 O -0.447 6.447 12 C -0.042 4.042 13 O -0.216 6.216 14 C 0.130 3.870 15 C -0.197 4.197 16 C -0.186 4.186 17 O -0.358 6.358 18 Si 0.686 3.314 19 C -0.058 4.058 20 C -0.256 4.256 21 C 0.119 3.881 22 O -0.243 6.243 23 C -0.078 4.078 24 C -0.271 4.271 25 C -0.154 4.154 26 C -0.150 4.150 27 H 0.072 0.928 28 H 0.071 0.929 29 H 0.076 0.924 30 H 0.087 0.913 31 H 0.074 0.926 32 H 0.086 0.914 33 H 0.070 0.930 34 H 0.057 0.943 35 H 0.096 0.904 36 H 0.258 0.742 37 H 0.136 0.864 38 H 0.142 0.858 39 H 0.114 0.886 40 H 0.230 0.770 41 H -0.187 1.187 42 H -0.237 1.237 43 H 0.174 0.826 44 H 0.175 0.825 45 H 0.135 0.865 46 H 0.085 0.915 47 H 0.089 0.911 48 H 0.171 0.829 49 H 0.106 0.894 50 H 0.096 0.904 51 H 0.100 0.900 52 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 3.628 4.086 -5.703 7.899 hybrid contribution -1.277 0.422 -0.379 1.397 sum 2.352 4.508 -6.083 7.928 Atomic orbital electron populations 1.21836 0.95969 1.01666 1.01878 1.21564 0.95897 0.96233 1.02075 1.21197 0.95632 0.95918 0.97469 0.90312 1.21577 1.00945 0.94454 0.97961 1.21863 0.95198 0.97765 1.01510 1.21003 0.93867 0.81148 0.99619 0.92083 1.45790 1.67147 1.14945 1.08179 1.20496 0.77333 0.88171 0.84149 1.90773 1.52330 1.68470 1.33079 1.22737 1.04953 0.92885 0.83666 1.86223 1.80484 1.26775 1.28084 1.18599 0.92110 0.82920 0.93387 1.19608 1.10527 0.96741 0.92812 1.25179 0.84898 1.04331 1.04228 1.86651 1.19461 1.35804 1.93855 0.94098 0.89305 0.75993 0.71981 1.20948 0.93739 0.90982 1.00168 1.21401 1.10310 1.02984 0.90888 1.18866 0.92332 0.90175 0.86763 1.86056 1.80257 1.27035 1.30959 1.23407 0.99835 0.79494 1.05076 1.20554 1.13059 0.94154 0.99363 1.21759 1.01911 0.96229 0.95545 1.21551 0.94907 0.95757 1.02747 0.92835 0.92922 0.92414 0.91301 0.92572 0.91385 0.93034 0.94302 0.90354 0.74242 0.86398 0.85763 0.88580 0.77027 1.18709 1.23691 0.82647 0.82459 0.86525 0.91485 0.91076 0.82936 0.89405 0.90401 0.90049 0.92479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.14 9.67 71.98 0.70 0.84 16 2 C -0.12 0.17 5.40 30.59 0.17 0.34 16 3 C -0.08 0.18 2.19 -10.79 -0.02 0.15 16 4 H 0.08 -0.25 8.14 -2.38 -0.02 -0.27 16 5 C -0.11 -0.13 4.96 30.60 0.15 0.02 16 6 C -0.12 -0.27 5.49 30.60 0.17 -0.10 16 7 C 0.15 0.14 2.45 44.99 0.11 0.25 16 8 H 0.06 0.45 7.58 -2.39 -0.02 0.43 16 9 N -0.71 0.84 5.08 -442.53 -2.25 -1.40 16 10 C 0.51 3.21 7.87 87.66 0.69 3.90 16 11 O -0.57 -10.31 16.16 16.02 0.26 -10.05 16 12 C 0.04 0.03 5.22 71.24 0.37 0.40 16 13 O -0.30 -2.87 8.99 -73.38 -0.66 -3.53 16 14 C 0.18 1.11 6.66 22.49 0.15 1.26 16 15 C -0.20 -0.97 5.27 -19.75 -0.10 -1.08 16 16 C -0.08 -0.54 2.37 71.24 0.17 -0.37 16 17 O -0.55 -5.99 12.88 -148.98 -1.92 -7.91 16 18 Si 0.78 0.91 30.24 68.60 2.07 2.99 16 19 C -0.04 -0.01 8.65 22.24 0.19 0.18 16 20 C -0.24 0.18 9.04 22.38 0.20 0.38 16 21 C 0.16 0.32 6.68 22.49 0.15 0.47 16 22 O -0.33 -0.28 10.49 -92.42 -0.97 -1.25 16 23 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 24 C -0.25 -0.67 8.97 22.46 0.20 -0.47 16 25 C -0.12 0.54 5.39 30.60 0.16 0.70 16 26 C -0.11 0.37 5.21 30.60 0.16 0.53 16 27 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 28 H 0.05 0.00 6.57 -2.38 -0.02 -0.01 16 29 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 30 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 32 H 0.07 0.09 6.56 -2.39 -0.02 0.07 16 33 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 34 H 0.04 0.32 8.14 -2.39 -0.02 0.31 16 35 H 0.08 -0.06 8.14 -2.38 -0.02 -0.08 16 36 H 0.42 -3.78 8.60 -92.71 -0.80 -4.58 16 37 H 0.12 -0.51 7.66 -2.39 -0.02 -0.53 16 38 H 0.12 -0.68 7.66 -2.38 -0.02 -0.70 16 39 H 0.10 0.98 7.82 -2.39 -0.02 0.96 16 40 H 0.38 1.24 8.70 -74.06 -0.64 0.59 16 41 H -0.26 -0.32 6.68 99.48 0.66 0.35 16 42 H -0.31 -2.97 7.11 99.48 0.71 -2.26 16 43 H 0.16 -0.63 4.85 -2.91 -0.01 -0.65 16 44 H 0.16 -0.95 6.29 -2.91 -0.02 -0.97 16 45 H 0.12 -1.09 8.14 -2.39 -0.02 -1.11 16 46 H 0.07 -0.53 7.67 -2.38 -0.02 -0.55 16 47 H 0.07 -0.60 7.65 -2.39 -0.02 -0.62 16 48 H 0.15 -0.26 6.30 -2.91 -0.02 -0.28 16 49 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 50 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 51 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 52 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 Total: 0.00 -25.25 408.71 0.75 -24.50 By element: Atomic # 1 Polarization: -11.23 SS G_CDS: -0.51 Total: -11.75 kcal Atomic # 6 Polarization: 3.68 SS G_CDS: 4.73 Total: 8.41 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -2.25 Total: -1.40 kcal Atomic # 8 Polarization: -19.46 SS G_CDS: -3.29 Total: -22.75 kcal Atomic # 14 Polarization: 0.91 SS G_CDS: 2.07 Total: 2.99 kcal Total: -25.25 0.75 -24.50 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.908 kcal (2) G-P(sol) polarization free energy of solvation -25.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.751 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds