Wall clock time and date at job start Sat Mar 6 2021 13:34:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53000 * 109.46846 * 2 1 4 4 H 1.09002 * 109.47131 * 55.00145 * 3 2 1 5 5 C 1.53002 * 109.46806 * 174.99609 * 3 2 1 6 6 C 1.52997 * 109.46978 * 179.97438 * 5 3 2 7 7 C 1.53002 * 109.47415 * 300.00098 * 6 5 3 8 8 H 1.09002 * 109.47070 * 300.00053 * 7 6 5 9 9 N 1.46505 * 109.47411 * 179.97438 * 7 6 5 10 10 C 1.34769 * 119.99798 * 155.00053 * 9 7 6 11 11 O 1.21634 * 120.00553 * 359.97438 * 10 9 7 12 12 C 1.47194 * 119.99662 * 180.02562 * 10 9 7 13 13 C 1.36011 * 123.46123 * 0.02562 * 12 10 9 14 14 S 1.70449 * 110.81687 * 179.97438 * 13 12 10 15 15 C 1.75509 * 92.44307 * 359.97438 * 14 13 12 16 16 C 1.50700 * 124.70687 * 179.97438 * 15 14 13 17 17 O 1.42904 * 109.46731 * 120.02704 * 16 15 14 18 18 Si 1.86295 * 109.47448 * 0.03039 * 16 15 14 19 19 C 1.32761 * 110.57686 * 359.74319 * 15 14 13 20 20 C 1.52997 * 109.46817 * 59.99873 * 7 6 5 21 21 C 1.52992 * 109.47482 * 300.00014 * 20 7 6 22 22 H 1.09001 * 109.46997 * 300.00027 * 1 2 3 23 23 H 1.09002 * 109.46824 * 60.00417 * 1 2 3 24 24 H 1.08996 * 109.46751 * 180.02562 * 1 2 3 25 25 H 1.08991 * 109.47210 * 239.99499 * 2 1 3 26 26 H 1.09002 * 109.46824 * 119.99583 * 2 1 3 27 27 H 1.09002 * 109.47097 * 59.99871 * 5 3 2 28 28 H 1.08998 * 109.47844 * 300.00086 * 5 3 2 29 29 H 1.09000 * 109.47140 * 180.02562 * 6 5 3 30 30 H 1.09002 * 109.47497 * 60.00450 * 6 5 3 31 31 H 0.97005 * 119.99239 * 335.00029 * 9 7 6 32 32 H 1.08001 * 124.59181 * 359.97438 * 13 12 10 33 33 H 1.08997 * 109.47565 * 240.02564 * 16 15 14 34 34 H 0.96697 * 114.00300 * 299.99874 * 17 16 15 35 35 H 1.48503 * 110.00099 * 179.97438 * 18 16 15 36 36 H 1.48500 * 110.00060 * 301.31502 * 18 16 15 37 37 H 1.08005 * 123.45901 * 180.23171 * 19 15 14 38 38 H 1.09002 * 109.47153 * 60.00231 * 20 7 6 39 39 H 1.08998 * 109.47533 * 179.97438 * 20 7 6 40 40 H 1.09002 * 109.47103 * 300.00247 * 21 20 7 41 41 H 1.08996 * 109.47747 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 0.8418 5 6 3.5648 1.4443 0.1258 6 6 4.0748 2.8868 0.1252 7 6 3.6702 3.5703 -1.1825 8 1 4.1049 3.0309 -2.0241 9 7 4.1580 4.9518 -1.1828 10 6 4.3827 5.5867 -2.3502 11 8 4.1809 5.0128 -3.4034 12 6 4.8734 6.9745 -2.3505 13 6 5.1238 7.6816 -1.2160 14 16 5.6788 9.2494 -1.5894 15 6 5.5755 8.9558 -3.3167 16 6 5.9313 9.9618 -4.3808 17 8 6.9851 9.4421 -5.1942 18 14 6.4918 11.5455 -3.5757 19 6 5.1451 7.7228 -3.5555 20 6 2.1454 3.5684 -1.3083 21 6 1.6353 2.1260 -1.3077 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8901 24 1 -0.3633 -1.0277 0.0005 25 1 1.8934 -0.5139 -0.8899 26 1 1.8934 -0.5138 0.8901 27 1 3.9995 0.9053 -0.7160 28 1 3.8533 0.9571 1.0572 29 1 5.1612 2.8881 0.2144 30 1 3.6403 3.4263 0.9668 31 1 4.3193 5.4093 -0.3428 32 1 4.9893 7.3013 -0.2141 33 1 5.0571 10.1591 -5.0012 34 1 7.7964 9.2430 -4.7071 35 1 6.8462 12.5457 -4.6146 36 1 5.4162 12.0795 -2.7021 37 1 5.0086 7.3217 -4.5490 38 1 1.7107 4.1079 -0.4667 39 1 1.8570 4.0558 -2.2396 40 1 2.0700 1.5866 -2.1492 41 1 0.5490 2.1247 -1.3968 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_6894386.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:34:35 Heat of formation + Delta-G solvation = -61.170573 kcal Electronic energy + Delta-G solvation = -21524.208482 eV Core-core repulsion = 18302.978123 eV Total energy + Delta-G solvation = -3221.230358 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.123 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.21291 -39.72806 -38.69164 -37.08286 -36.06227 -33.57731 -31.88816 -31.65852 -29.24403 -26.98348 -25.84900 -24.33709 -23.62076 -22.01182 -21.64840 -20.98093 -20.25022 -19.02025 -18.03983 -17.74801 -17.00639 -16.40261 -16.20567 -15.83861 -15.64644 -15.48401 -15.14180 -14.97794 -14.57036 -14.38320 -14.29439 -14.10771 -13.88733 -13.61486 -13.54379 -13.25107 -12.78805 -12.67648 -12.55194 -12.35439 -12.25900 -12.14251 -11.91760 -11.71330 -11.48227 -11.28668 -11.07154 -10.79766 -10.62527 -10.07766 -9.98420 -9.50771 -5.22000 -0.37016 0.32077 0.67037 0.92120 1.17018 1.53455 1.84940 2.12879 2.39705 3.30987 3.54722 3.61887 3.64160 3.77241 3.84828 3.96974 4.03205 4.13635 4.27506 4.29332 4.37163 4.39075 4.42798 4.48322 4.50369 4.65528 4.70615 4.71042 4.77799 4.97222 4.99128 5.03057 5.08415 5.10693 5.12735 5.21531 5.22737 5.23662 5.30558 5.42877 5.51082 5.55182 6.45531 6.49124 7.25315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.121 4.121 3 C -0.090 4.090 4 H 0.071 0.929 5 C -0.111 4.111 6 C -0.126 4.126 7 C 0.146 3.854 8 H 0.090 0.910 9 N -0.723 5.723 10 C 0.578 3.422 11 O -0.531 6.531 12 C -0.155 4.155 13 C -0.206 4.206 14 S 0.195 5.805 15 C -0.244 4.244 16 C -0.026 4.026 17 O -0.533 6.533 18 Si 0.654 3.346 19 C -0.053 4.053 20 C -0.129 4.129 21 C -0.113 4.113 22 H 0.053 0.947 23 H 0.057 0.943 24 H 0.053 0.947 25 H 0.062 0.938 26 H 0.062 0.938 27 H 0.066 0.934 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.068 0.932 31 H 0.397 0.603 32 H 0.171 0.829 33 H 0.124 0.876 34 H 0.381 0.619 35 H -0.232 1.232 36 H -0.236 1.236 37 H 0.156 0.844 38 H 0.063 0.937 39 H 0.068 0.932 40 H 0.065 0.935 41 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.955 0.934 5.964 6.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.108 4.108 4 H 0.089 0.911 5 C -0.149 4.149 6 C -0.164 4.164 7 C 0.042 3.958 8 H 0.108 0.892 9 N -0.374 5.374 10 C 0.363 3.637 11 O -0.408 6.408 12 C -0.173 4.173 13 C -0.345 4.345 14 S 0.461 5.539 15 C -0.360 4.360 16 C -0.139 4.139 17 O -0.339 6.339 18 Si 0.553 3.447 19 C -0.082 4.082 20 C -0.168 4.168 21 C -0.151 4.151 22 H 0.072 0.928 23 H 0.076 0.924 24 H 0.072 0.928 25 H 0.081 0.919 26 H 0.080 0.920 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.232 0.768 32 H 0.188 0.812 33 H 0.141 0.859 34 H 0.229 0.771 35 H -0.155 1.155 36 H -0.161 1.161 37 H 0.174 0.826 38 H 0.082 0.918 39 H 0.086 0.914 40 H 0.084 0.916 41 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 1.657 2.706 5.705 6.528 hybrid contribution -0.877 -1.448 -0.473 1.758 sum 0.780 1.258 5.233 5.438 Atomic orbital electron populations 1.21832 0.95809 1.01707 1.01930 1.21569 0.96036 0.96104 1.02098 1.21245 0.95218 0.96169 0.98193 0.91094 1.21539 0.95395 0.95454 1.02539 1.21808 1.01331 0.96682 0.96586 1.21043 0.94309 0.81186 0.99235 0.89176 1.45943 1.68149 1.15119 1.08235 1.17614 0.77129 0.85032 0.83878 1.90823 1.51706 1.67240 1.31049 1.20291 1.08494 0.95815 0.92714 1.25784 1.05517 1.00436 1.02717 1.83079 1.61766 1.10006 0.99061 1.24799 1.12396 1.00719 0.98131 1.24448 0.93717 1.02206 0.93540 1.86542 1.24339 1.86558 1.36445 0.95094 0.87986 0.77506 0.84093 1.21051 0.96320 0.91859 0.98998 1.21921 0.94837 0.97506 1.02516 1.21602 1.01101 0.94814 0.97585 0.92805 0.92440 0.92772 0.91891 0.91959 0.91489 0.91286 0.91178 0.91356 0.76812 0.81179 0.85890 0.77143 1.15515 1.16055 0.82602 0.91839 0.91359 0.91615 0.91300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.11 9.67 37.16 0.36 0.47 16 2 C -0.12 0.11 5.40 -26.73 -0.14 -0.04 16 3 C -0.09 0.10 2.19 -90.62 -0.20 -0.10 16 4 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 5 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 6 C -0.13 0.22 5.39 -26.73 -0.14 0.08 16 7 C 0.15 0.03 2.46 -67.93 -0.17 -0.14 16 8 H 0.09 0.21 7.58 -51.93 -0.39 -0.18 16 9 N -0.72 0.01 5.05 -54.95 -0.28 -0.26 16 10 C 0.58 1.75 7.76 -12.63 -0.10 1.65 16 11 O -0.53 -3.72 16.46 5.25 0.09 -3.63 16 12 C -0.15 -0.21 5.98 -104.63 -0.63 -0.84 16 13 C -0.21 0.28 10.38 29.93 0.31 0.59 16 14 S 0.19 -0.33 20.18 -107.50 -2.17 -2.50 16 15 C -0.24 -0.01 5.69 -36.18 -0.21 -0.21 16 16 C -0.03 0.01 2.95 36.01 0.11 0.12 16 17 O -0.53 -0.10 12.85 -35.23 -0.45 -0.56 16 18 Si 0.65 -1.00 30.91 -169.99 -5.25 -6.26 16 19 C -0.05 -0.10 9.91 -39.02 -0.39 -0.49 16 20 C -0.13 -0.06 5.49 -26.74 -0.15 -0.20 16 21 C -0.11 0.02 4.96 -26.73 -0.13 -0.11 16 22 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 23 H 0.06 -0.03 6.56 -51.93 -0.34 -0.37 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.40 -1.11 7.10 -40.82 -0.29 -1.40 16 32 H 0.17 -0.73 7.01 -52.49 -0.37 -1.10 16 33 H 0.12 -0.01 7.96 -51.93 -0.41 -0.43 16 34 H 0.38 -1.42 8.70 45.56 0.40 -1.02 16 35 H -0.23 -0.30 7.11 56.52 0.40 0.10 16 36 H -0.24 -0.07 7.11 56.52 0.40 0.33 16 37 H 0.16 0.47 8.06 -52.48 -0.42 0.04 16 38 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.07 0.18 8.14 -51.93 -0.42 -0.25 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.07 -0.01 6.56 -51.93 -0.34 -0.35 16 LS Contribution 340.30 15.07 5.13 5.13 Total: 0.00 -6.28 340.30 -10.99 -17.27 By element: Atomic # 1 Polarization: -3.54 SS G_CDS: -6.44 Total: -9.98 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -1.61 Total: 0.79 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.28 Total: -0.26 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.37 Total: -4.19 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.25 Total: -6.26 kcal Atomic # 16 Polarization: -0.33 SS G_CDS: -2.17 Total: -2.50 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -6.28 -10.99 -17.27 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_6894386.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.897 kcal (2) G-P(sol) polarization free energy of solvation -6.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.994 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.274 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.171 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds