Wall clock time and date at job start Sat Mar 6 2021 13:34:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53004 * 109.47048 * 2 1 4 4 H 1.08994 * 109.46884 * 304.99921 * 3 2 1 5 5 C 1.52996 * 109.46913 * 65.00352 * 3 2 1 6 6 C 1.53004 * 109.46913 * 180.02562 * 5 3 2 7 7 C 1.52998 * 109.47087 * 299.99714 * 6 5 3 8 8 H 1.08996 * 109.46820 * 300.00124 * 7 6 5 9 9 N 1.46497 * 109.47075 * 180.02562 * 7 6 5 10 10 C 1.34767 * 120.00228 * 85.00091 * 9 7 6 11 11 O 1.21556 * 120.00367 * 359.97438 * 10 9 7 12 12 C 1.47851 * 120.00366 * 180.02562 * 10 9 7 13 13 C 1.39556 * 120.14707 * 173.47470 * 12 10 9 14 14 C 1.50699 * 120.07395 * 0.02577 * 13 12 10 15 15 C 1.37979 * 119.84894 * 179.76679 * 13 12 10 16 16 C 1.38334 * 120.14925 * 0.48791 * 15 13 12 17 17 C 1.50693 * 119.85514 * 179.76365 * 16 15 13 18 18 C 1.38381 * 120.29047 * 359.79050 * 16 15 13 19 19 C 1.50701 * 119.92998 * 179.97438 * 18 16 15 20 20 O 1.42903 * 109.46986 * 284.97790 * 19 18 16 21 21 Si 1.86293 * 109.47502 * 164.97636 * 19 18 16 22 22 C 1.37937 * 120.14651 * 359.95386 * 18 16 15 23 23 C 1.53004 * 109.47039 * 59.99901 * 7 6 5 24 24 C 1.52992 * 109.47074 * 300.00240 * 23 7 6 25 25 H 1.08996 * 109.47101 * 299.99957 * 1 2 3 26 26 H 1.09001 * 109.47083 * 60.00251 * 1 2 3 27 27 H 1.09002 * 109.46958 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.46889 * 240.00366 * 2 1 3 29 29 H 1.08996 * 109.47575 * 120.00262 * 2 1 3 30 30 H 1.08996 * 109.47510 * 59.99560 * 5 3 2 31 31 H 1.08999 * 109.47081 * 299.99414 * 5 3 2 32 32 H 1.08997 * 109.46813 * 179.97438 * 6 5 3 33 33 H 1.08998 * 109.46903 * 60.00067 * 6 5 3 34 34 H 0.97000 * 119.99911 * 264.99869 * 9 7 6 35 35 H 1.09000 * 109.47488 * 83.40344 * 14 13 12 36 36 H 1.08992 * 109.46948 * 203.40613 * 14 13 12 37 37 H 1.09007 * 109.47115 * 323.40596 * 14 13 12 38 38 H 1.08004 * 119.92274 * 180.25509 * 15 13 12 39 39 H 1.09003 * 109.47661 * 270.02220 * 17 16 15 40 40 H 1.08998 * 109.47431 * 30.02290 * 17 16 15 41 41 H 1.09006 * 109.47399 * 150.02260 * 17 16 15 42 42 H 1.08998 * 109.46842 * 44.97309 * 19 18 16 43 43 H 0.96705 * 113.99809 * 299.99655 * 20 19 18 44 44 H 1.48500 * 110.00022 * 58.68009 * 21 19 18 45 45 H 1.48499 * 110.00169 * 180.02562 * 21 19 18 46 46 H 1.08004 * 120.07779 * 180.02562 * 22 18 16 47 47 H 1.08996 * 109.46696 * 179.97438 * 23 7 6 48 48 H 1.09001 * 109.46716 * 60.00183 * 23 7 6 49 49 H 1.09000 * 109.47124 * 180.02562 * 24 23 7 50 50 H 1.09001 * 109.47302 * 299.99584 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6353 2.1265 1.3074 6 6 2.1447 3.5692 1.3071 7 6 3.6695 3.5716 1.1811 8 1 4.1044 3.0328 2.0228 9 7 4.1573 4.9530 1.1814 10 6 4.3820 5.5880 2.3487 11 8 4.1794 5.0148 3.4013 12 6 4.8738 6.9823 2.3491 13 6 4.9781 7.6884 3.5483 14 6 4.5901 7.0313 4.8478 15 6 5.4424 8.9877 3.5421 16 6 5.7945 9.5940 2.3496 17 6 6.2957 11.0151 2.3499 18 6 5.6880 8.9014 1.1563 19 6 6.0733 9.5700 -0.1381 20 8 5.0571 10.5018 -0.5139 21 14 6.2585 8.2821 -1.4713 22 6 5.2303 7.6002 1.1491 23 6 4.0742 2.8875 -0.1263 24 6 3.5648 1.4449 -0.1260 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8933 -0.5138 -0.8901 29 1 1.8934 -0.5138 0.8899 30 1 2.0698 1.5874 2.1491 31 1 0.5490 2.1252 1.3969 32 1 1.8560 4.0566 2.2383 33 1 1.7097 4.1080 0.4653 34 1 4.3187 5.4106 0.3415 35 1 5.4254 6.4369 5.2181 36 1 4.3360 7.7971 5.5805 37 1 3.7280 6.3843 4.6846 38 1 5.5275 9.5339 4.4700 39 1 5.4532 11.6977 2.2387 40 1 6.8074 11.2198 3.2904 41 1 6.9893 11.1560 1.5209 42 1 7.0187 10.0966 -0.0077 43 1 4.1867 10.1020 -0.6473 44 1 4.9855 7.5356 -1.6368 45 1 6.6390 8.9287 -2.7528 46 1 5.1480 7.0606 0.2172 47 1 5.1605 2.8897 -0.2163 48 1 3.6392 3.4264 -0.9681 49 1 3.8535 0.9575 -1.0572 50 1 3.9998 0.9061 0.7157 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466078_9599494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:34:43 Heat of formation + Delta-G solvation = -69.605826 kcal Electronic energy + Delta-G solvation = -27541.045302 eV Core-core repulsion = 23919.221680 eV Total energy + Delta-G solvation = -3621.823623 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.198 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.70252 -40.49625 -39.33179 -37.75249 -36.18640 -34.38418 -34.03662 -32.85166 -31.80742 -29.80048 -28.98756 -28.21247 -25.64806 -24.69741 -23.86415 -23.53843 -22.36729 -21.54126 -21.14391 -20.62037 -19.05660 -17.70017 -17.47568 -16.78574 -16.46457 -16.38446 -16.17429 -15.78983 -15.64972 -15.63305 -15.07344 -14.90278 -14.62680 -14.57180 -14.36733 -14.25359 -14.06525 -13.89839 -13.75007 -13.47199 -13.23443 -13.10294 -12.88592 -12.70182 -12.68083 -12.55468 -12.51661 -12.33085 -12.14216 -11.93852 -11.79787 -11.71186 -11.47748 -11.25120 -11.07053 -10.64590 -10.48645 -10.05934 -9.88384 -9.57664 -5.08081 -0.18774 0.18177 1.16074 1.42038 1.81881 1.87063 2.11513 2.70749 3.29192 3.47571 3.53917 3.63950 3.66227 3.67812 3.79322 3.85834 4.00805 4.11771 4.16084 4.17987 4.29504 4.36808 4.41722 4.43749 4.47459 4.49770 4.53782 4.54507 4.65294 4.70593 4.71447 4.73530 4.77308 4.88796 4.95541 4.98279 4.99769 5.06780 5.07416 5.09317 5.10436 5.12556 5.22453 5.22753 5.28990 5.31131 5.43683 5.48465 5.50938 5.55189 5.61529 5.83324 6.31457 6.49115 7.25053 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.120 4.120 3 C -0.090 4.090 4 H 0.070 0.930 5 C -0.113 4.113 6 C -0.129 4.129 7 C 0.146 3.854 8 H 0.091 0.909 9 N -0.726 5.726 10 C 0.561 3.439 11 O -0.526 6.526 12 C -0.145 4.145 13 C -0.008 4.008 14 C -0.124 4.124 15 C -0.132 4.132 16 C -0.024 4.024 17 C -0.121 4.121 18 C -0.135 4.135 19 C -0.072 4.072 20 O -0.526 6.526 21 Si 0.682 3.318 22 C -0.080 4.080 23 C -0.128 4.128 24 C -0.111 4.111 25 H 0.057 0.943 26 H 0.053 0.947 27 H 0.053 0.947 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.065 0.935 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.062 0.938 34 H 0.396 0.604 35 H 0.078 0.922 36 H 0.059 0.941 37 H 0.096 0.904 38 H 0.133 0.867 39 H 0.079 0.921 40 H 0.069 0.931 41 H 0.073 0.927 42 H 0.120 0.880 43 H 0.375 0.625 44 H -0.259 1.259 45 H -0.253 1.253 46 H 0.127 0.873 47 H 0.071 0.929 48 H 0.067 0.933 49 H 0.068 0.932 50 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.325 -0.636 -2.014 2.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.158 4.158 3 C -0.109 4.109 4 H 0.089 0.911 5 C -0.150 4.150 6 C -0.168 4.168 7 C 0.042 3.958 8 H 0.109 0.891 9 N -0.377 5.377 10 C 0.349 3.651 11 O -0.404 6.404 12 C -0.148 4.148 13 C -0.009 4.009 14 C -0.180 4.180 15 C -0.150 4.150 16 C -0.025 4.025 17 C -0.177 4.177 18 C -0.135 4.135 19 C -0.182 4.182 20 O -0.332 6.332 21 Si 0.583 3.417 22 C -0.098 4.098 23 C -0.166 4.166 24 C -0.149 4.149 25 H 0.076 0.924 26 H 0.072 0.928 27 H 0.072 0.928 28 H 0.080 0.920 29 H 0.081 0.919 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.086 0.914 33 H 0.081 0.919 34 H 0.231 0.769 35 H 0.097 0.903 36 H 0.078 0.922 37 H 0.114 0.886 38 H 0.150 0.850 39 H 0.098 0.902 40 H 0.088 0.912 41 H 0.092 0.908 42 H 0.138 0.862 43 H 0.223 0.777 44 H -0.184 1.184 45 H -0.178 1.178 46 H 0.144 0.856 47 H 0.090 0.910 48 H 0.086 0.914 49 H 0.087 0.913 50 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.401 -0.935 -1.995 2.611 hybrid contribution -1.030 0.770 -0.385 1.342 sum 0.371 -0.166 -2.381 2.415 Atomic orbital electron populations 1.21830 0.95825 1.01701 1.01920 1.21567 0.96018 0.96102 1.02097 1.21245 0.95265 0.96160 0.98199 0.91139 1.21597 1.01069 0.94804 0.97580 1.21925 0.94901 0.97484 1.02470 1.21041 0.94264 0.81237 0.99254 0.89060 1.46054 1.68127 1.15134 1.08413 1.18231 0.77211 0.85869 0.83792 1.90747 1.51968 1.67170 1.30524 1.19641 1.06913 0.94481 0.93803 1.20105 0.92783 0.93150 0.94876 1.21121 1.03943 1.00518 0.92382 1.21040 1.01279 0.94586 0.98129 1.19989 0.94352 0.96144 0.91990 1.20922 1.01735 0.91971 1.03095 1.19967 1.03642 0.94216 0.95714 1.24966 0.94370 1.00171 0.98659 1.86619 1.21137 1.35377 1.90054 0.95023 0.86908 0.81210 0.78541 1.21187 0.97117 0.94407 0.97133 1.21821 1.01448 0.96669 0.96625 1.21532 0.95349 0.95445 1.02547 0.92447 0.92823 0.92772 0.91963 0.91885 0.91601 0.91349 0.91352 0.91929 0.76866 0.90305 0.92196 0.88593 0.84955 0.90234 0.91215 0.90783 0.86215 0.77717 1.18412 1.17811 0.85567 0.91029 0.91436 0.91297 0.91463 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.12 9.67 37.16 0.36 0.48 16 2 C -0.12 0.12 5.40 -26.73 -0.14 -0.03 16 3 C -0.09 0.11 2.19 -90.62 -0.20 -0.09 16 4 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 5 C -0.11 0.05 4.96 -26.73 -0.13 -0.08 16 6 C -0.13 -0.03 5.49 -26.73 -0.15 -0.17 16 7 C 0.15 -0.01 2.45 -67.93 -0.17 -0.17 16 8 H 0.09 0.16 7.57 -51.93 -0.39 -0.24 16 9 N -0.73 -0.05 5.03 -54.75 -0.28 -0.32 16 10 C 0.56 1.39 7.67 -12.33 -0.09 1.30 16 11 O -0.53 -2.75 13.01 5.32 0.07 -2.68 16 12 C -0.15 -0.24 5.87 -104.96 -0.62 -0.85 16 13 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 14 C -0.12 -0.23 8.73 36.01 0.31 0.09 16 15 C -0.13 -0.09 9.31 -39.64 -0.37 -0.46 16 16 C -0.02 -0.01 5.89 -104.54 -0.62 -0.62 16 17 C -0.12 0.11 9.53 36.00 0.34 0.45 16 18 C -0.13 0.02 5.26 -104.68 -0.55 -0.53 16 19 C -0.07 0.07 2.04 36.01 0.07 0.15 16 20 O -0.53 -0.12 12.80 -35.23 -0.45 -0.57 16 21 Si 0.68 -1.26 30.24 -169.99 -5.14 -6.40 16 22 C -0.08 0.02 8.13 -39.18 -0.32 -0.30 16 23 C -0.13 0.22 5.39 -26.73 -0.14 0.08 16 24 C -0.11 0.18 5.20 -26.74 -0.14 0.04 16 25 H 0.06 -0.04 6.56 -51.93 -0.34 -0.38 16 26 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 -0.03 6.57 -51.93 -0.34 -0.37 16 32 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 33 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 34 H 0.40 -0.76 6.68 -40.82 -0.27 -1.03 16 35 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 36 H 0.06 0.02 8.04 -51.93 -0.42 -0.40 16 37 H 0.10 0.34 5.86 -51.92 -0.30 0.03 16 38 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 39 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 41 H 0.07 -0.09 6.22 -51.93 -0.32 -0.41 16 42 H 0.12 -0.20 6.48 -51.93 -0.34 -0.54 16 43 H 0.38 -0.88 8.70 45.56 0.40 -0.49 16 44 H -0.26 0.24 6.68 56.52 0.38 0.62 16 45 H -0.25 -0.38 7.11 56.52 0.40 0.03 16 46 H 0.13 -0.26 3.25 -52.48 -0.17 -0.43 16 47 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 48 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 49 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 50 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 380.03 15.07 5.73 5.73 Total: 0.00 -4.99 380.03 -11.72 -16.71 By element: Atomic # 1 Polarization: -2.61 SS G_CDS: -8.49 Total: -11.09 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -3.16 Total: -1.37 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -0.28 Total: -0.32 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.38 Total: -3.25 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.14 Total: -6.40 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -4.99 -11.72 -16.71 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_9599494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.896 kcal (2) G-P(sol) polarization free energy of solvation -4.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.886 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.720 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.710 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.606 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds