Wall clock time and date at job start Sat Mar 6 2021 13:34:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53004 * 109.47048 * 2 1 4 4 H 1.08994 * 109.46884 * 304.99921 * 3 2 1 5 5 C 1.52996 * 109.46913 * 65.00352 * 3 2 1 6 6 C 1.53004 * 109.46913 * 180.02562 * 5 3 2 7 7 C 1.52998 * 109.47087 * 299.99714 * 6 5 3 8 8 H 1.08996 * 109.46820 * 300.00124 * 7 6 5 9 9 N 1.46497 * 109.47075 * 180.02562 * 7 6 5 10 10 C 1.34767 * 120.00228 * 85.00091 * 9 7 6 11 11 O 1.21556 * 120.00367 * 359.97438 * 10 9 7 12 12 C 1.47851 * 120.00366 * 180.02562 * 10 9 7 13 13 C 1.39556 * 120.14707 * 173.47470 * 12 10 9 14 14 C 1.50699 * 120.07395 * 0.02577 * 13 12 10 15 15 C 1.37979 * 119.84894 * 179.76679 * 13 12 10 16 16 C 1.38334 * 120.14925 * 0.48791 * 15 13 12 17 17 C 1.50693 * 119.85514 * 179.76365 * 16 15 13 18 18 C 1.38381 * 120.29047 * 359.79050 * 16 15 13 19 19 C 1.50701 * 119.92998 * 179.97438 * 18 16 15 20 20 O 1.42903 * 109.46986 * 284.97790 * 19 18 16 21 21 Si 1.86293 * 109.47502 * 164.97636 * 19 18 16 22 22 C 1.37937 * 120.14651 * 359.95386 * 18 16 15 23 23 C 1.53004 * 109.47039 * 59.99901 * 7 6 5 24 24 C 1.52992 * 109.47074 * 300.00240 * 23 7 6 25 25 H 1.08996 * 109.47101 * 299.99957 * 1 2 3 26 26 H 1.09001 * 109.47083 * 60.00251 * 1 2 3 27 27 H 1.09002 * 109.46958 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.46889 * 240.00366 * 2 1 3 29 29 H 1.08996 * 109.47575 * 120.00262 * 2 1 3 30 30 H 1.08996 * 109.47510 * 59.99560 * 5 3 2 31 31 H 1.08999 * 109.47081 * 299.99414 * 5 3 2 32 32 H 1.08997 * 109.46813 * 179.97438 * 6 5 3 33 33 H 1.08998 * 109.46903 * 60.00067 * 6 5 3 34 34 H 0.97000 * 119.99911 * 264.99869 * 9 7 6 35 35 H 1.09000 * 109.47488 * 83.40344 * 14 13 12 36 36 H 1.08992 * 109.46948 * 203.40613 * 14 13 12 37 37 H 1.09007 * 109.47115 * 323.40596 * 14 13 12 38 38 H 1.08004 * 119.92274 * 180.25509 * 15 13 12 39 39 H 1.09003 * 109.47661 * 270.02220 * 17 16 15 40 40 H 1.08998 * 109.47431 * 30.02290 * 17 16 15 41 41 H 1.09006 * 109.47399 * 150.02260 * 17 16 15 42 42 H 1.08998 * 109.46842 * 44.97309 * 19 18 16 43 43 H 0.96705 * 113.99809 * 299.99655 * 20 19 18 44 44 H 1.48500 * 110.00022 * 58.68009 * 21 19 18 45 45 H 1.48499 * 110.00169 * 180.02562 * 21 19 18 46 46 H 1.08004 * 120.07779 * 180.02562 * 22 18 16 47 47 H 1.08996 * 109.46696 * 179.97438 * 23 7 6 48 48 H 1.09001 * 109.46716 * 60.00183 * 23 7 6 49 49 H 1.09000 * 109.47124 * 180.02562 * 24 23 7 50 50 H 1.09001 * 109.47302 * 299.99584 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 -0.8418 5 6 1.6353 2.1265 1.3074 6 6 2.1447 3.5692 1.3071 7 6 3.6695 3.5716 1.1811 8 1 4.1044 3.0328 2.0228 9 7 4.1573 4.9530 1.1814 10 6 4.3820 5.5880 2.3487 11 8 4.1794 5.0148 3.4013 12 6 4.8738 6.9823 2.3491 13 6 4.9781 7.6884 3.5483 14 6 4.5901 7.0313 4.8478 15 6 5.4424 8.9877 3.5421 16 6 5.7945 9.5940 2.3496 17 6 6.2957 11.0151 2.3499 18 6 5.6880 8.9014 1.1563 19 6 6.0733 9.5700 -0.1381 20 8 5.0571 10.5018 -0.5139 21 14 6.2585 8.2821 -1.4713 22 6 5.2303 7.6002 1.1491 23 6 4.0742 2.8875 -0.1263 24 6 3.5648 1.4449 -0.1260 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8933 -0.5138 -0.8901 29 1 1.8934 -0.5138 0.8899 30 1 2.0698 1.5874 2.1491 31 1 0.5490 2.1252 1.3969 32 1 1.8560 4.0566 2.2383 33 1 1.7097 4.1080 0.4653 34 1 4.3187 5.4106 0.3415 35 1 5.4254 6.4369 5.2181 36 1 4.3360 7.7971 5.5805 37 1 3.7280 6.3843 4.6846 38 1 5.5275 9.5339 4.4700 39 1 5.4532 11.6977 2.2387 40 1 6.8074 11.2198 3.2904 41 1 6.9893 11.1560 1.5209 42 1 7.0187 10.0966 -0.0077 43 1 4.1867 10.1020 -0.6473 44 1 4.9855 7.5356 -1.6368 45 1 6.6390 8.9287 -2.7528 46 1 5.1480 7.0606 0.2172 47 1 5.1605 2.8897 -0.2163 48 1 3.6392 3.4264 -0.9681 49 1 3.8535 0.9575 -1.0572 50 1 3.9998 0.9061 0.7157 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466078_9599494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:34:42 Heat of formation + Delta-G solvation = -62.225749 kcal Electronic energy + Delta-G solvation = -27540.725278 eV Core-core repulsion = 23919.221680 eV Total energy + Delta-G solvation = -3621.503599 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.198 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.78040 -40.50399 -39.37836 -37.74068 -36.25145 -34.42661 -34.05400 -32.84745 -31.77406 -29.80699 -29.01971 -28.18987 -25.65380 -24.67612 -23.86904 -23.51932 -22.36933 -21.59610 -21.14351 -20.61152 -19.07787 -17.71679 -17.53095 -16.77938 -16.43834 -16.42996 -16.21138 -15.83335 -15.64770 -15.59022 -15.07017 -14.95527 -14.62388 -14.58039 -14.34135 -14.23857 -14.06088 -13.89890 -13.79480 -13.46128 -13.17821 -13.10144 -12.92693 -12.71821 -12.70259 -12.54340 -12.50263 -12.31284 -12.09315 -11.93106 -11.77099 -11.67033 -11.42407 -11.20264 -11.05460 -10.64989 -10.57745 -10.16040 -9.90576 -9.62144 -4.93907 -0.25208 0.16134 1.27663 1.52737 1.73310 1.93740 2.05804 2.64159 3.39510 3.47643 3.56739 3.67959 3.68977 3.71173 3.80286 3.86457 4.06517 4.13246 4.16498 4.20691 4.34606 4.38491 4.46948 4.49344 4.51145 4.52909 4.53374 4.60099 4.68207 4.69447 4.76076 4.76339 4.81015 4.83304 4.89606 5.00774 5.04157 5.06722 5.11679 5.13270 5.15465 5.18602 5.24302 5.26336 5.29142 5.31890 5.45752 5.48741 5.50014 5.53870 5.58894 5.80545 6.44536 6.48296 7.14170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.119 4.119 3 C -0.085 4.085 4 H 0.074 0.926 5 C -0.110 4.110 6 C -0.124 4.124 7 C 0.147 3.853 8 H 0.070 0.930 9 N -0.715 5.715 10 C 0.556 3.444 11 O -0.562 6.562 12 C -0.159 4.159 13 C -0.025 4.025 14 C -0.118 4.118 15 C -0.136 4.136 16 C -0.030 4.030 17 C -0.120 4.120 18 C -0.134 4.134 19 C -0.079 4.079 20 O -0.542 6.542 21 Si 0.750 3.250 22 C -0.074 4.074 23 C -0.121 4.121 24 C -0.110 4.110 25 H 0.053 0.947 26 H 0.054 0.946 27 H 0.053 0.947 28 H 0.067 0.933 29 H 0.058 0.942 30 H 0.056 0.944 31 H 0.067 0.933 32 H 0.044 0.956 33 H 0.069 0.931 34 H 0.408 0.592 35 H 0.071 0.929 36 H 0.072 0.928 37 H 0.075 0.925 38 H 0.145 0.855 39 H 0.076 0.924 40 H 0.079 0.921 41 H 0.078 0.922 42 H 0.128 0.872 43 H 0.385 0.615 44 H -0.265 1.265 45 H -0.299 1.299 46 H 0.145 0.855 47 H 0.080 0.920 48 H 0.080 0.920 49 H 0.079 0.921 50 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.799 -0.302 -3.306 3.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.157 4.157 3 C -0.104 4.104 4 H 0.092 0.908 5 C -0.148 4.148 6 C -0.163 4.163 7 C 0.043 3.957 8 H 0.088 0.912 9 N -0.366 5.366 10 C 0.345 3.655 11 O -0.442 6.442 12 C -0.162 4.162 13 C -0.026 4.026 14 C -0.174 4.174 15 C -0.154 4.154 16 C -0.030 4.030 17 C -0.176 4.176 18 C -0.134 4.134 19 C -0.188 4.188 20 O -0.350 6.350 21 Si 0.655 3.345 22 C -0.092 4.092 23 C -0.159 4.159 24 C -0.148 4.148 25 H 0.072 0.928 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.085 0.915 29 H 0.077 0.923 30 H 0.075 0.925 31 H 0.085 0.915 32 H 0.063 0.937 33 H 0.088 0.912 34 H 0.245 0.755 35 H 0.089 0.911 36 H 0.091 0.909 37 H 0.094 0.906 38 H 0.163 0.837 39 H 0.095 0.905 40 H 0.098 0.902 41 H 0.097 0.903 42 H 0.145 0.855 43 H 0.234 0.766 44 H -0.191 1.191 45 H -0.227 1.227 46 H 0.162 0.838 47 H 0.098 0.902 48 H 0.098 0.902 49 H 0.098 0.902 50 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 1.867 -0.604 -3.294 3.834 hybrid contribution -1.185 0.712 -0.004 1.382 sum 0.682 0.108 -3.299 3.370 Atomic orbital electron populations 1.21837 0.96034 1.01654 1.01835 1.21558 0.95830 0.96171 1.02129 1.21200 0.95687 0.95943 0.97543 0.90783 1.21562 1.00904 0.94360 0.97928 1.21857 0.95199 0.97758 1.01455 1.21021 0.93871 0.81092 0.99688 0.91179 1.45980 1.67176 1.15115 1.08330 1.18467 0.76902 0.86261 0.83849 1.90733 1.53624 1.68017 1.31831 1.19681 1.07785 0.94141 0.94560 1.20214 0.93695 0.93845 0.94863 1.21010 1.02804 1.00449 0.93123 1.21191 1.01034 0.94180 0.98994 1.20219 0.93994 0.96777 0.92019 1.20939 1.01740 0.91036 1.03865 1.20091 1.03166 0.94136 0.96000 1.25165 0.94467 1.00565 0.98582 1.86595 1.22009 1.36275 1.90099 0.94218 0.85343 0.79734 0.75211 1.21309 0.96284 0.94458 0.97138 1.21790 1.02061 0.96391 0.95650 1.21531 0.94842 0.95561 1.02831 0.92778 0.92653 0.92819 0.91463 0.92296 0.92527 0.91451 0.93745 0.91181 0.75492 0.91065 0.90880 0.90617 0.83705 0.90495 0.90245 0.90333 0.85482 0.76567 1.19055 1.22720 0.83759 0.90182 0.90168 0.90247 0.92050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.23 9.67 71.98 0.70 0.93 16 2 C -0.12 0.25 5.40 30.60 0.17 0.42 16 3 C -0.09 0.22 2.19 -10.79 -0.02 0.20 16 4 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 5 C -0.11 0.00 4.96 30.59 0.15 0.15 16 6 C -0.12 -0.17 5.49 30.59 0.17 0.00 16 7 C 0.15 0.08 2.45 44.99 0.11 0.19 16 8 H 0.07 0.37 7.57 -2.39 -0.02 0.35 16 9 N -0.71 -0.30 5.03 -445.42 -2.24 -2.54 16 10 C 0.56 3.45 7.67 86.79 0.67 4.12 16 11 O -0.56 -7.21 13.01 -3.89 -0.05 -7.26 16 12 C -0.16 -0.61 5.87 -20.09 -0.12 -0.72 16 13 C -0.03 -0.11 5.91 -19.61 -0.12 -0.23 16 14 C -0.12 -0.63 8.73 71.24 0.62 -0.01 16 15 C -0.14 -0.20 9.31 22.23 0.21 0.01 16 16 C -0.03 0.00 5.89 -19.81 -0.12 -0.12 16 17 C -0.12 0.31 9.53 71.23 0.68 0.99 16 18 C -0.13 0.15 5.26 -19.90 -0.10 0.04 16 19 C -0.08 0.23 2.04 71.24 0.15 0.38 16 20 O -0.54 0.17 12.80 -148.98 -1.91 -1.73 16 21 Si 0.75 -3.54 30.24 68.60 2.07 -1.46 16 22 C -0.07 0.07 8.13 22.53 0.18 0.26 16 23 C -0.12 0.53 5.39 30.59 0.16 0.69 16 24 C -0.11 0.41 5.20 30.59 0.16 0.57 16 25 H 0.05 -0.04 6.56 -2.39 -0.02 -0.06 16 26 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 27 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 28 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 29 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 30 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 31 H 0.07 0.01 6.57 -2.39 -0.02 -0.01 16 32 H 0.04 0.28 8.14 -2.39 -0.02 0.26 16 33 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.41 -1.90 6.68 -92.71 -0.62 -2.52 16 35 H 0.07 0.45 8.14 -2.39 -0.02 0.43 16 36 H 0.07 0.13 8.04 -2.39 -0.02 0.11 16 37 H 0.08 0.74 5.86 -2.38 -0.01 0.72 16 38 H 0.15 -0.27 8.06 -2.91 -0.02 -0.30 16 39 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 40 H 0.08 -0.36 8.08 -2.39 -0.02 -0.38 16 41 H 0.08 -0.27 6.22 -2.38 -0.01 -0.28 16 42 H 0.13 -0.58 6.48 -2.39 -0.02 -0.59 16 43 H 0.39 -2.13 8.70 -74.05 -0.64 -2.77 16 44 H -0.26 1.00 6.68 99.48 0.66 1.66 16 45 H -0.30 -0.98 7.11 99.48 0.71 -0.27 16 46 H 0.15 -0.80 3.25 -2.91 -0.01 -0.81 16 47 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 48 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 49 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 50 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 Total: 0.00 -13.21 380.03 1.19 -12.02 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -0.33 Total: -6.88 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 3.64 Total: 7.85 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -2.24 Total: -2.54 kcal Atomic # 8 Polarization: -7.04 SS G_CDS: -1.96 Total: -8.99 kcal Atomic # 14 Polarization: -3.54 SS G_CDS: 2.07 Total: -1.46 kcal Total: -13.21 1.19 -12.02 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466078_9599494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.202 kcal (2) G-P(sol) polarization free energy of solvation -13.210 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.024 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.226 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds