Wall clock time and date at job start Sat Mar 6 2021 16:06:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35446 * 125.56791 * 2 1 4 4 C 1.50701 * 126.06809 * 359.93695 * 3 2 1 5 5 O 1.42896 * 109.47417 * 210.02830 * 4 3 2 6 6 Si 1.86301 * 109.47149 * 330.02846 * 4 3 2 7 7 C 1.39836 * 107.86663 * 180.20441 * 3 2 1 8 8 C 1.50696 * 126.45998 * 179.75782 * 7 3 2 9 9 C 1.37876 * 107.08060 * 359.60998 * 7 3 2 10 10 C 1.46685 * 126.23013 * 180.14173 * 9 7 3 11 11 O 1.21695 * 119.99797 * 0.31399 * 10 9 7 12 12 N 1.34772 * 119.99772 * 180.31563 * 10 9 7 13 13 C 1.46504 * 119.99827 * 180.02562 * 12 10 9 14 14 H 1.09003 * 112.84373 * 336.18815 * 13 12 10 15 15 C 1.53779 * 113.61763 * 107.49813 * 13 12 10 16 16 C 1.53785 * 87.07945 * 89.11399 * 15 13 12 17 17 H 1.09000 * 113.69185 * 270.87256 * 16 15 13 18 18 C 1.50703 * 113.61151 * 139.97898 * 16 15 13 19 19 C 1.38245 * 119.97691 * 322.22854 * 18 16 15 20 20 C 1.38195 * 120.02401 * 179.72421 * 19 18 16 21 21 C 1.38455 * 119.97502 * 0.57021 * 20 19 18 22 22 F 1.35102 * 120.02854 * 179.67704 * 21 20 19 23 23 C 1.38461 * 119.94687 * 359.70741 * 21 20 19 24 24 C 1.38188 * 119.97680 * 359.97438 * 23 21 20 25 25 C 1.53781 * 113.61143 * 204.99891 * 13 12 10 26 26 N 1.35538 * 125.55769 * 179.97438 * 2 1 3 27 27 H 1.09003 * 109.46848 * 89.99771 * 1 2 3 28 28 H 1.08995 * 109.47855 * 210.00197 * 1 2 3 29 29 H 1.09002 * 109.46726 * 330.00827 * 1 2 3 30 30 H 1.09002 * 109.47060 * 90.02857 * 4 3 2 31 31 H 0.96699 * 114.00604 * 179.97438 * 5 4 3 32 32 H 1.48501 * 110.00188 * 178.68010 * 6 4 3 33 33 H 1.48498 * 110.00005 * 299.99971 * 6 4 3 34 34 H 1.08996 * 109.47398 * 89.99660 * 8 7 3 35 35 H 1.09000 * 109.47119 * 209.99927 * 8 7 3 36 36 H 1.09001 * 109.46945 * 329.99478 * 8 7 3 37 37 H 0.96996 * 120.00138 * 359.97438 * 12 10 9 38 38 H 1.08997 * 113.61016 * 203.66393 * 15 13 12 39 39 H 1.08997 * 113.61607 * 334.56920 * 15 13 12 40 40 H 1.08001 * 119.98451 * 359.97438 * 19 18 16 41 41 H 1.08003 * 120.01269 * 180.29878 * 20 19 18 42 42 H 1.08008 * 120.00888 * 180.02562 * 23 21 20 43 43 H 1.08004 * 119.99039 * 180.02562 * 24 23 21 44 44 H 1.08996 * 113.61651 * 25.42805 * 25 13 12 45 45 H 1.09004 * 113.61432 * 156.24554 * 25 13 12 46 46 H 0.96996 * 125.67819 * 0.05870 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8201 2.5320 -0.0013 5 8 2.7776 3.3512 -0.6752 6 14 0.1811 2.6415 -0.8804 7 6 3.6270 0.6766 -0.0047 8 6 4.8486 1.5589 -0.0116 9 6 3.6121 -0.7021 0.0014 10 6 4.7859 -1.5818 0.0024 11 8 5.9048 -1.1033 0.0032 12 7 4.6251 -2.9199 0.0023 13 6 5.7974 -3.7985 0.0038 14 1 6.6877 -3.3169 -0.4007 15 6 6.0347 -4.5069 1.3480 16 6 5.1257 -5.6320 0.8258 17 1 4.0695 -5.4810 1.0489 18 6 5.6080 -7.0137 1.1856 19 6 6.9612 -7.2965 1.1787 20 6 7.4050 -8.5616 1.5140 21 6 6.4931 -9.5493 1.8454 22 9 6.9254 -10.7882 2.1670 23 6 5.1377 -9.2665 1.8463 24 6 4.6966 -7.9989 1.5171 25 6 5.5252 -5.1899 -0.5919 26 7 2.2952 -1.1026 0.0005 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3634 -0.8899 0.5138 29 1 -0.3633 0.8901 0.5137 30 1 1.7052 2.8777 1.0260 31 1 2.5365 4.2868 -0.7146 32 1 -0.3133 4.0416 -0.8608 33 1 0.3243 2.1730 -2.2822 34 1 5.1475 1.7737 1.0144 35 1 5.6621 1.0492 -0.5278 36 1 4.6199 2.4921 -0.5264 37 1 3.7332 -3.3012 0.0020 38 1 7.0684 -4.8165 1.5018 39 1 5.6203 -3.9720 2.2025 40 1 7.6721 -6.5273 0.9152 41 1 8.4625 -8.7809 1.5133 42 1 4.4254 -10.0361 2.1050 43 1 3.6394 -7.7780 1.5181 44 1 4.6996 -5.2063 -1.3033 45 1 6.4194 -5.6857 -0.9697 46 1 1.9832 -2.0211 0.0001 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:06:45 Heat of formation + Delta-G solvation = -17.616643 kcal Electronic energy + Delta-G solvation = -29234.550128 eV Core-core repulsion = 25006.497855 eV Total energy + Delta-G solvation = -4228.052273 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -49.81307 -42.63826 -41.51555 -39.99103 -38.59609 -37.77188 -34.73982 -33.62140 -33.12912 -32.21319 -31.38469 -29.29216 -27.59780 -26.88075 -26.51505 -25.67373 -24.16921 -22.95409 -22.41666 -20.69923 -20.45338 -19.91518 -19.32595 -18.72896 -18.35748 -17.52757 -17.15029 -16.88003 -16.58390 -16.52319 -16.28922 -15.93888 -15.54967 -15.36028 -15.20503 -14.95837 -14.64621 -14.59266 -14.35702 -14.25526 -14.13703 -13.98719 -13.92889 -13.82977 -13.71863 -13.53335 -13.15677 -12.97483 -12.86560 -12.64359 -12.34758 -12.24796 -11.97254 -11.80550 -11.72831 -11.37788 -10.93572 -10.51660 -10.20334 -10.13663 -9.53067 -9.39430 -8.93613 -4.82551 0.07630 0.18547 0.44431 1.20723 1.62266 1.73608 1.93074 2.02167 2.08166 2.40698 2.48454 3.25941 3.29469 3.30070 3.49682 3.55197 3.67919 3.69327 3.79036 3.84421 3.87697 3.96170 3.99827 4.17919 4.18717 4.31526 4.31925 4.41650 4.48641 4.57767 4.60205 4.66005 4.72025 4.75144 4.79280 4.85262 4.89004 4.95429 4.99139 5.01601 5.11136 5.19775 5.22521 5.38392 5.48515 5.53063 5.58696 5.79028 5.85072 6.01435 6.30939 6.46635 6.60864 7.18884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C 0.064 3.936 3 C -0.168 4.168 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.649 3.351 7 C -0.031 4.031 8 C -0.097 4.097 9 C -0.071 4.071 10 C 0.595 3.405 11 O -0.519 6.519 12 N -0.717 5.717 13 C 0.122 3.878 14 H 0.109 0.891 15 C -0.144 4.144 16 C -0.072 4.072 17 H 0.097 0.903 18 C -0.083 4.083 19 C -0.087 4.087 20 C -0.150 4.150 21 C 0.095 3.905 22 F -0.140 7.140 23 C -0.151 4.151 24 C -0.087 4.087 25 C -0.136 4.136 26 N -0.535 5.535 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.101 0.899 30 H 0.070 0.930 31 H 0.376 0.624 32 H -0.259 1.259 33 H -0.256 1.256 34 H 0.063 0.937 35 H 0.074 0.926 36 H 0.086 0.914 37 H 0.393 0.607 38 H 0.097 0.903 39 H 0.076 0.924 40 H 0.134 0.866 41 H 0.136 0.864 42 H 0.136 0.864 43 H 0.131 0.869 44 H 0.077 0.923 45 H 0.100 0.900 46 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.829 -1.173 1.110 7.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.054 4.054 3 C -0.175 4.175 4 C -0.144 4.144 5 O -0.338 6.338 6 Si 0.550 3.450 7 C -0.040 4.040 8 C -0.154 4.154 9 C -0.182 4.182 10 C 0.384 3.616 11 O -0.395 6.395 12 N -0.368 5.368 13 C 0.016 3.984 14 H 0.127 0.873 15 C -0.183 4.183 16 C -0.091 4.091 17 H 0.116 0.884 18 C -0.083 4.083 19 C -0.105 4.105 20 C -0.169 4.169 21 C 0.075 3.925 22 F -0.118 7.118 23 C -0.170 4.170 24 C -0.105 4.105 25 C -0.174 4.174 26 N -0.132 5.132 27 H 0.107 0.893 28 H 0.106 0.894 29 H 0.119 0.881 30 H 0.088 0.912 31 H 0.223 0.777 32 H -0.184 1.184 33 H -0.180 1.180 34 H 0.081 0.919 35 H 0.093 0.907 36 H 0.104 0.896 37 H 0.227 0.773 38 H 0.115 0.885 39 H 0.095 0.905 40 H 0.152 0.848 41 H 0.154 0.846 42 H 0.154 0.846 43 H 0.149 0.851 44 H 0.095 0.905 45 H 0.119 0.881 46 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -6.113 -1.276 0.379 6.256 hybrid contribution 0.150 -0.114 0.014 0.189 sum -5.963 -1.390 0.393 6.135 Atomic orbital electron populations 1.20407 0.87579 1.03599 1.04189 1.20007 0.93316 0.85657 1.06432 1.18439 0.92831 0.92502 1.13714 1.23938 1.01500 0.88886 1.00077 1.86555 1.45661 1.22287 1.79341 0.95635 0.81434 0.84235 0.83671 1.19799 0.95030 0.90516 0.98639 1.20518 0.93719 0.98933 1.02203 1.20066 0.82679 0.94082 1.21408 1.16991 0.87605 0.81060 0.75962 1.90845 1.24177 1.74824 1.49619 1.45536 1.09034 1.05609 1.76666 1.21844 0.89727 0.89801 0.96992 0.87316 1.23586 1.00768 0.95951 0.97962 1.21586 0.99964 0.90724 0.96787 0.88442 1.19746 0.93301 0.95294 0.99940 1.20896 0.95401 0.95898 0.98345 1.21193 1.00157 0.93129 1.02387 1.17780 0.92956 0.80413 1.01316 1.91523 1.90417 1.39624 1.90251 1.21190 0.94066 0.98571 1.03184 1.20920 0.99898 0.91782 0.97906 1.23449 1.03135 0.94895 0.95918 1.41656 1.05254 1.08084 1.58253 0.89348 0.89375 0.88123 0.91209 0.77670 1.18436 1.17988 0.91864 0.90713 0.89594 0.77303 0.88466 0.90541 0.84805 0.84567 0.84643 0.85081 0.90474 0.88139 0.74669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.50 8.21 36.01 0.30 0.79 16 2 C 0.06 -0.06 6.84 -81.95 -0.56 -0.62 16 3 C -0.17 -0.31 5.42 -105.02 -0.57 -0.88 16 4 C -0.03 -0.02 3.02 36.01 0.11 0.09 16 5 O -0.53 -0.85 10.01 -35.23 -0.35 -1.21 16 6 Si 0.65 -0.60 26.76 -169.99 -4.55 -5.15 16 7 C -0.03 -0.12 6.15 -104.16 -0.64 -0.76 16 8 C -0.10 -0.43 9.50 36.00 0.34 -0.09 16 9 C -0.07 -0.15 7.06 -81.98 -0.58 -0.73 16 10 C 0.60 1.60 7.79 -12.85 -0.10 1.50 16 11 O -0.52 -3.29 14.41 5.19 0.07 -3.21 16 12 N -0.72 0.78 5.26 -54.32 -0.29 0.49 16 13 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 14 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 15 C -0.14 0.26 7.25 -25.92 -0.19 0.07 16 16 C -0.07 0.21 3.86 -90.95 -0.35 -0.14 16 17 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 18 C -0.08 0.11 5.29 -104.61 -0.55 -0.44 16 19 C -0.09 0.08 8.59 -39.59 -0.34 -0.26 16 20 C -0.15 -0.04 10.03 -39.52 -0.40 -0.43 16 21 C 0.09 0.14 7.30 -39.42 -0.29 -0.14 16 22 F -0.14 -0.43 17.27 2.25 0.04 -0.39 16 23 C -0.15 -0.02 10.03 -39.52 -0.40 -0.42 16 24 C -0.09 0.10 9.71 -39.60 -0.38 -0.28 16 25 C -0.14 0.39 7.29 -25.92 -0.19 0.20 16 26 N -0.53 0.78 5.99 -5.69 -0.03 0.75 16 27 H 0.09 -0.47 7.13 -51.93 -0.37 -0.84 16 28 H 0.09 -0.61 8.14 -51.93 -0.42 -1.03 16 29 H 0.10 -0.62 5.18 -51.93 -0.27 -0.89 16 30 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 31 H 0.38 -0.87 8.74 45.56 0.40 -0.47 16 32 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 33 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 34 H 0.06 0.26 8.14 -51.93 -0.42 -0.16 16 35 H 0.07 0.43 6.50 -51.93 -0.34 0.09 16 36 H 0.09 0.38 5.60 -51.93 -0.29 0.09 16 37 H 0.39 -1.58 7.83 -40.82 -0.32 -1.90 16 38 H 0.10 -0.21 6.32 -51.93 -0.33 -0.53 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 40 H 0.13 -0.35 6.67 -52.49 -0.35 -0.70 16 41 H 0.14 -0.14 8.06 -52.48 -0.42 -0.56 16 42 H 0.14 -0.16 8.06 -52.48 -0.42 -0.58 16 43 H 0.13 -0.42 8.05 -52.48 -0.42 -0.85 16 44 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 45 H 0.10 -0.29 7.72 -51.93 -0.40 -0.69 16 46 H 0.42 -2.13 8.19 -40.82 -0.33 -2.46 16 LS Contribution 371.71 15.07 5.60 5.60 Total: 0.00 -10.05 371.71 -10.56 -20.61 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -5.98 Total: -14.51 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -5.08 Total: -2.98 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.32 Total: 1.24 kcal Atomic # 8 Polarization: -4.14 SS G_CDS: -0.28 Total: -4.42 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.04 Total: -0.39 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -4.55 Total: -5.15 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.05 -10.56 -20.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.995 kcal (2) G-P(sol) polarization free energy of solvation -10.048 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds