Wall clock time and date at job start Sat Mar 6 2021 16:07:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.37947 * 119.92368 * 299.72830 * 4 2 1 6 6 C 1.39599 * 119.87151 * 179.70407 * 5 4 2 7 7 C 1.47842 * 120.13865 * 180.26691 * 6 5 4 8 8 O 1.21550 * 120.00062 * 0.30242 * 7 6 5 9 9 N 1.34776 * 120.00000 * 180.29486 * 7 6 5 10 10 C 1.46505 * 120.00143 * 180.02562 * 9 7 6 11 11 H 1.09008 * 112.84499 * 23.80277 * 10 9 7 12 12 C 1.53778 * 113.61746 * 155.00230 * 10 9 7 13 13 C 1.53783 * 87.08078 * 89.11745 * 12 10 9 14 14 H 1.08997 * 113.61275 * 270.88224 * 13 12 10 15 15 C 1.50698 * 113.61081 * 139.98194 * 13 12 10 16 16 C 1.38245 * 119.97512 * 299.72550 * 15 13 12 17 17 C 1.38199 * 120.02193 * 179.73120 * 16 15 13 18 18 C 1.38462 * 119.97604 * 0.56442 * 17 16 15 19 19 F 1.35098 * 120.02820 * 179.68474 * 18 17 16 20 20 C 1.38459 * 119.94832 * 359.71218 * 18 17 16 21 21 C 1.38200 * 119.97410 * 359.97438 * 20 18 17 22 22 C 1.53775 * 113.61446 * 252.50293 * 10 9 7 23 23 C 1.39547 * 119.72149 * 0.56779 * 6 5 4 24 24 C 1.38068 * 119.84162 * 359.72891 * 23 6 5 25 25 Br 1.89099 * 119.93764 * 180.02562 * 24 23 6 26 26 C 1.38363 * 119.92148 * 120.00226 * 4 2 1 27 27 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 28 28 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 29 29 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 30 30 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 31 31 H 1.07990 * 120.05944 * 359.97438 * 5 4 2 32 32 H 0.96992 * 120.00276 * 0.02562 * 9 7 6 33 33 H 1.08996 * 113.61333 * 203.66839 * 12 10 9 34 34 H 1.09005 * 113.61052 * 334.56740 * 12 10 9 35 35 H 1.07993 * 119.98820 * 359.97438 * 16 15 13 36 36 H 1.08004 * 120.01065 * 180.29885 * 17 16 15 37 37 H 1.07999 * 120.01789 * 180.02562 * 20 18 17 38 38 H 1.07998 * 119.98735 * 180.02562 * 21 20 18 39 39 H 1.08996 * 113.61807 * 25.42885 * 22 10 9 40 40 H 1.09005 * 113.61736 * 156.33493 * 22 10 9 41 41 H 1.08001 * 120.07833 * 179.74778 * 23 6 5 42 42 H 1.07999 * 119.86035 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6017 -2.0328 -1.4443 6 6 2.0625 -2.6881 -2.5875 7 6 1.7080 -4.1035 -2.8255 8 8 1.0094 -4.6975 -2.0277 9 7 2.1594 -4.7351 -3.9272 10 6 1.8076 -6.1376 -4.1634 11 1 0.8922 -6.4362 -3.6524 12 6 1.8445 -6.5406 -5.6470 13 6 3.3261 -6.8927 -5.4334 14 1 4.0030 -6.0558 -5.6049 15 6 3.7562 -8.1501 -6.1440 16 6 3.1489 -9.3552 -5.8439 17 6 3.5387 -10.5080 -6.4990 18 6 4.5459 -10.4577 -7.4477 19 9 4.9322 -11.5850 -8.0841 20 6 5.1574 -9.2511 -7.7433 21 6 4.7615 -8.0985 -7.0916 22 6 2.9792 -7.1107 -3.9511 23 6 2.8644 -2.0033 -3.5016 24 6 3.1922 -0.6818 -3.2728 25 35 4.2781 0.2489 -4.5100 26 6 2.7267 -0.0365 -2.1401 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 0.9848 -2.5587 -0.7308 32 1 2.7171 -4.2613 -4.5638 33 1 1.2201 -7.4028 -5.8809 34 1 1.6882 -5.7057 -6.3302 35 1 2.3669 -9.3952 -5.1002 36 1 3.0608 -11.4486 -6.2678 37 1 5.9428 -9.2105 -8.4834 38 1 5.2380 -7.1572 -7.3223 39 1 3.7391 -6.7362 -3.2653 40 1 2.6651 -8.1289 -3.7214 41 1 3.2275 -2.5059 -4.3859 42 1 2.9851 0.9975 -1.9659 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:07:29 Heat of formation + Delta-G solvation = -25.369058 kcal Electronic energy + Delta-G solvation = -28115.934988 eV Core-core repulsion = 23796.003551 eV Total energy + Delta-G solvation = -4319.931437 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.037 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -49.80726 -41.93486 -41.09723 -39.93992 -38.68588 -37.84785 -34.85773 -33.69660 -33.05347 -32.20371 -31.30302 -30.54547 -27.17407 -26.90074 -26.55664 -25.12490 -24.10007 -22.91447 -22.67011 -21.72051 -20.37997 -19.29458 -18.74172 -18.00102 -17.86531 -17.42147 -17.29118 -16.92747 -16.56049 -16.51668 -16.46319 -16.06285 -15.80623 -15.51390 -15.48991 -15.03101 -14.78639 -14.59455 -14.39854 -14.30733 -14.11521 -13.99296 -13.79445 -13.57634 -13.34247 -13.07401 -13.00045 -12.35645 -12.32985 -12.04712 -11.97685 -11.87609 -11.82341 -11.54034 -11.39646 -11.16789 -10.78440 -10.41926 -10.20924 -10.13425 -9.98909 -9.52482 -5.09921 -0.58009 -0.24999 0.08317 0.19335 0.33422 1.09572 1.45903 1.50896 1.81107 1.88442 2.41750 2.48891 3.12612 3.21361 3.24806 3.28466 3.33570 3.49212 3.53671 3.68055 3.69197 3.77019 3.79490 3.88363 3.89031 4.00669 4.13519 4.18359 4.19393 4.32181 4.43605 4.47253 4.56226 4.64959 4.67778 4.74899 4.83970 4.85598 4.88255 4.93188 4.98823 5.01288 5.11841 5.20386 5.29545 5.38250 5.51133 5.85814 6.25113 6.26129 7.00750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.679 3.321 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.565 3.435 8 O -0.523 6.523 9 N -0.708 5.708 10 C 0.119 3.881 11 H 0.109 0.891 12 C -0.136 4.136 13 C -0.073 4.073 14 H 0.099 0.901 15 C -0.083 4.083 16 C -0.088 4.088 17 C -0.150 4.150 18 C 0.095 3.905 19 F -0.140 7.140 20 C -0.151 4.151 21 C -0.086 4.086 22 C -0.144 4.144 23 C -0.053 4.053 24 C -0.094 4.094 25 Br -0.032 7.032 26 C -0.063 4.063 27 H 0.378 0.622 28 H 0.126 0.874 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.149 0.851 32 H 0.401 0.599 33 H 0.101 0.899 34 H 0.078 0.922 35 H 0.134 0.866 36 H 0.136 0.864 37 H 0.136 0.864 38 H 0.132 0.868 39 H 0.077 0.923 40 H 0.098 0.902 41 H 0.138 0.862 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.660 2.647 -1.610 4.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.119 4.119 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.352 3.648 8 O -0.400 6.400 9 N -0.360 5.360 10 C 0.014 3.986 11 H 0.127 0.873 12 C -0.174 4.174 13 C -0.091 4.091 14 H 0.118 0.882 15 C -0.083 4.083 16 C -0.106 4.106 17 C -0.169 4.169 18 C 0.075 3.925 19 F -0.118 7.118 20 C -0.170 4.170 21 C -0.104 4.104 22 C -0.183 4.183 23 C -0.074 4.074 24 C -0.174 4.174 25 Br 0.054 6.946 26 C -0.083 4.083 27 H 0.225 0.775 28 H 0.144 0.856 29 H -0.180 1.180 30 H -0.175 1.175 31 H 0.167 0.833 32 H 0.237 0.763 33 H 0.119 0.881 34 H 0.097 0.903 35 H 0.152 0.848 36 H 0.154 0.846 37 H 0.154 0.846 38 H 0.150 0.850 39 H 0.096 0.904 40 H 0.116 0.884 41 H 0.156 0.844 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.445 3.043 -0.978 4.025 hybrid contribution -0.760 -0.446 -0.903 1.261 sum 1.686 2.597 -1.880 3.622 Atomic orbital electron populations 1.86645 1.17155 1.79882 1.49362 1.25055 0.84362 1.11063 0.97876 0.95096 0.91615 0.74275 0.81062 1.20328 0.99266 0.94783 0.97490 1.21305 0.94338 0.92905 0.95052 1.19938 1.01933 0.94211 0.97124 1.18090 0.79625 0.85818 0.81300 1.90831 1.37076 1.67115 1.44937 1.45571 1.53547 1.12381 1.24519 1.21896 0.99301 0.80379 0.97068 0.87311 1.23450 0.95784 1.02514 0.95624 1.21599 0.96790 0.95287 0.95456 0.88243 1.19735 0.96603 0.94720 0.97228 1.20891 0.99529 0.91158 0.98989 1.21191 0.98024 1.00320 0.97366 1.17782 0.97069 0.82618 0.94989 1.91522 1.90173 1.49695 1.80435 1.21196 1.01879 0.91551 1.02374 1.20935 0.96297 0.97950 0.95252 1.23587 0.98579 1.00516 0.95583 1.21277 0.95145 0.92563 0.98417 1.21644 1.02981 0.95611 0.97155 1.96852 1.65730 1.75405 1.56646 1.21228 0.95100 0.99996 0.91929 0.77457 0.85617 1.17976 1.17471 0.83333 0.76350 0.88089 0.90292 0.84829 0.84594 0.84638 0.85006 0.90449 0.88415 0.84416 0.84021 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.14 12.77 -35.23 -0.45 -0.59 16 2 C -0.07 0.10 2.82 36.01 0.10 0.20 16 3 Si 0.68 -1.36 29.78 -169.99 -5.06 -6.42 16 4 C -0.12 0.13 5.38 -104.68 -0.56 -0.43 16 5 C -0.02 0.00 9.16 -39.18 -0.36 -0.36 16 6 C -0.13 0.03 5.87 -104.97 -0.62 -0.58 16 7 C 0.56 0.58 7.77 -12.33 -0.10 0.48 16 8 O -0.52 -2.54 15.95 5.32 0.08 -2.46 16 9 N -0.71 1.32 5.21 -53.96 -0.28 1.04 16 10 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 11 H 0.11 -0.02 7.46 -51.92 -0.39 -0.41 16 12 C -0.14 0.45 7.29 -25.92 -0.19 0.26 16 13 C -0.07 0.23 3.86 -90.96 -0.35 -0.12 16 14 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 15 C -0.08 0.13 5.29 -104.62 -0.55 -0.43 16 16 C -0.09 0.11 8.62 -39.59 -0.34 -0.24 16 17 C -0.15 -0.01 10.03 -39.51 -0.40 -0.41 16 18 C 0.09 0.13 7.30 -39.42 -0.29 -0.15 16 19 F -0.14 -0.42 17.27 2.25 0.04 -0.38 16 20 C -0.15 -0.01 10.03 -39.51 -0.40 -0.41 16 21 C -0.09 0.10 9.71 -39.59 -0.38 -0.28 16 22 C -0.14 0.34 7.25 -25.92 -0.19 0.15 16 23 C -0.05 0.10 9.28 -39.16 -0.36 -0.26 16 24 C -0.09 0.13 6.22 -39.57 -0.25 -0.12 16 25 Br -0.03 0.04 33.69 -68.01 -2.29 -2.25 16 26 C -0.06 0.10 8.41 -39.47 -0.33 -0.23 16 27 H 0.38 -0.98 8.70 45.56 0.40 -0.59 16 28 H 0.13 -0.27 7.96 -51.93 -0.41 -0.69 16 29 H -0.26 0.05 7.11 56.52 0.40 0.45 16 30 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 31 H 0.15 0.18 7.65 -52.49 -0.40 -0.23 16 32 H 0.40 -1.73 6.74 -40.82 -0.27 -2.01 16 33 H 0.10 -0.34 7.73 -51.93 -0.40 -0.74 16 34 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 35 H 0.13 -0.40 6.64 -52.49 -0.35 -0.74 16 36 H 0.14 -0.16 8.06 -52.48 -0.42 -0.58 16 37 H 0.14 -0.16 8.06 -52.49 -0.42 -0.58 16 38 H 0.13 -0.42 8.05 -52.49 -0.42 -0.85 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.10 -0.26 6.29 -51.93 -0.33 -0.59 16 41 H 0.14 -0.59 6.40 -52.49 -0.34 -0.92 16 42 H 0.14 -0.41 4.86 -52.49 -0.26 -0.67 16 LS Contribution 376.47 15.07 5.67 5.67 Total: 0.00 -7.37 376.47 -12.62 -19.99 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -4.48 Total: -11.16 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -5.85 Total: -3.43 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.28 Total: 1.04 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -0.36 Total: -3.05 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.06 Total: -6.42 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -7.37 -12.62 -19.99 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.382 kcal (2) G-P(sol) polarization free energy of solvation -7.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds