Wall clock time and date at job start Sat Mar 6 2021 16:07:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86298 * 109.47470 * 2 1 4 4 C 1.50709 * 109.47351 * 240.00007 * 2 1 3 5 5 C 1.38623 * 119.93795 * 75.00088 * 4 2 1 6 6 F 1.35095 * 119.88435 * 0.27518 * 5 4 2 7 7 C 1.38685 * 120.23723 * 180.02562 * 5 4 2 8 8 C 1.37813 * 120.11672 * 0.02562 * 7 5 4 9 9 C 1.39670 * 119.88003 * 359.97438 * 8 7 5 10 10 C 1.47730 * 120.11494 * 180.02562 * 9 8 7 11 11 O 1.21567 * 119.99713 * 180.02562 * 10 9 8 12 12 N 1.34778 * 119.99786 * 359.97438 * 10 9 8 13 13 C 1.46503 * 119.99637 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.85057 * 23.80319 * 13 12 10 15 15 C 1.53780 * 113.61560 * 155.00305 * 13 12 10 16 16 C 1.53777 * 87.08208 * 89.11383 * 15 13 12 17 17 H 1.08999 * 113.61712 * 270.80125 * 16 15 13 18 18 C 1.50696 * 113.61387 * 139.98139 * 16 15 13 19 19 C 1.38244 * 119.97845 * 299.72657 * 18 16 15 20 20 C 1.38197 * 120.02822 * 179.72312 * 19 18 16 21 21 C 1.38455 * 119.97402 * 0.57178 * 20 19 18 22 22 F 1.35103 * 120.02574 * 179.67587 * 21 20 19 23 23 C 1.38458 * 119.94691 * 359.70504 * 21 20 19 24 24 C 1.38199 * 119.97771 * 359.97438 * 23 21 20 25 25 C 1.53780 * 113.61267 * 252.50041 * 13 12 10 26 26 C 1.37861 * 119.93875 * 255.00703 * 4 2 1 27 27 H 0.96697 * 114.00119 * 299.99675 * 1 2 3 28 28 H 1.09000 * 109.47046 * 120.00530 * 2 1 3 29 29 H 1.48503 * 110.00218 * 178.68059 * 3 2 1 30 30 H 1.48493 * 109.99875 * 300.00254 * 3 2 1 31 31 H 1.08006 * 119.93841 * 179.97438 * 7 5 4 32 32 H 1.08000 * 120.05586 * 179.97438 * 8 7 5 33 33 H 0.96998 * 120.00316 * 0.02562 * 12 10 9 34 34 H 1.08995 * 113.61604 * 203.66851 * 15 13 12 35 35 H 1.09004 * 113.61343 * 334.56277 * 15 13 12 36 36 H 1.08003 * 119.98362 * 359.97438 * 19 18 16 37 37 H 1.08003 * 120.00977 * 180.29563 * 20 19 18 38 38 H 1.08005 * 120.01354 * 180.02562 * 23 21 20 39 39 H 1.08003 * 119.98729 * 180.02562 * 24 23 21 40 40 H 1.08995 * 113.61761 * 25.42815 * 25 13 12 41 41 H 1.09003 * 113.61503 * 156.33705 * 25 13 12 42 42 H 1.08003 * 120.06291 * 359.97132 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8689 -0.0835 -2.4653 6 9 1.3627 1.1653 -2.5613 7 6 2.3290 -0.7317 -3.6017 8 6 2.8506 -2.0039 -3.5088 9 6 2.9159 -2.6402 -2.2671 10 6 3.4745 -4.0037 -2.1614 11 8 3.5299 -4.5556 -1.0797 12 7 3.9219 -4.6360 -3.2644 13 6 4.4754 -5.9884 -3.1597 14 1 4.1142 -6.5269 -2.2834 15 6 4.3765 -6.7972 -4.4638 16 6 5.7462 -6.2083 -4.8406 17 1 5.6818 -5.2630 -5.3793 18 6 6.6671 -7.1989 -5.5050 19 6 7.0451 -8.3476 -4.8352 20 6 7.8850 -9.2596 -5.4457 21 6 8.3575 -9.0167 -6.7243 22 9 9.1839 -9.9043 -7.3196 23 6 7.9828 -7.8631 -7.3920 24 6 7.1375 -6.9558 -6.7821 25 6 6.0023 -6.0441 -3.3331 26 6 2.4521 -1.9826 -1.1261 27 1 -0.3933 0.4416 0.7650 28 1 1.7923 -0.5139 0.8899 29 1 3.5347 1.7702 0.0321 30 1 1.5616 2.4678 -1.2084 31 1 2.2776 -0.2389 -4.5614 32 1 3.2082 -2.5079 -4.3945 33 1 3.8773 -4.1957 -4.1276 34 1 4.3923 -7.8762 -4.3107 35 1 3.5671 -6.4735 -5.1181 36 1 6.6806 -8.5344 -3.8358 37 1 8.1763 -10.1592 -4.9239 38 1 8.3504 -7.6728 -8.3896 39 1 6.8448 -6.0561 -7.3030 40 1 6.5055 -5.1124 -3.0747 41 1 6.4627 -6.9174 -2.8709 42 1 2.5007 -2.4700 -0.1635 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:07:47 Heat of formation + Delta-G solvation = -62.698463 kcal Electronic energy + Delta-G solvation = -28505.213181 eV Core-core repulsion = 24054.027047 eV Total energy + Delta-G solvation = -4451.186134 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.117 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -50.43556 -49.81810 -41.88089 -40.91031 -39.69212 -38.62715 -37.64364 -34.83128 -33.06881 -32.22978 -32.15510 -31.18656 -27.09042 -26.90933 -26.41564 -24.95272 -24.10234 -23.47598 -22.68941 -21.63007 -20.40565 -19.08208 -18.97147 -18.69487 -18.52531 -17.95538 -17.53464 -17.18890 -16.95875 -16.68020 -16.52797 -16.28504 -16.07591 -15.65246 -15.52634 -15.21115 -15.13324 -14.88446 -14.72774 -14.60448 -14.30322 -14.25863 -13.98844 -13.84628 -13.76921 -13.64126 -13.47606 -13.00194 -12.83444 -12.35819 -12.33799 -11.98696 -11.83440 -11.45110 -11.40101 -11.13715 -10.68294 -10.29789 -10.20777 -10.15124 -9.89510 -9.53767 -4.97470 -0.59531 -0.12545 0.06989 0.17956 1.20863 1.51501 1.66637 1.86114 1.98197 2.43934 2.47857 2.89874 3.10960 3.24385 3.27673 3.40556 3.43145 3.48151 3.54483 3.63198 3.68696 3.78236 3.80088 3.87064 3.98989 4.00669 4.15130 4.17966 4.30831 4.45484 4.48022 4.55350 4.62058 4.66798 4.72431 4.74505 4.82841 4.85980 4.88127 4.91280 4.97213 4.98344 5.10529 5.19068 5.35633 5.45977 5.50443 5.84462 6.27810 6.52747 7.02775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.070 4.070 3 Si 0.669 3.331 4 C -0.118 4.118 5 C 0.129 3.871 6 F -0.113 7.113 7 C -0.157 4.157 8 C -0.053 4.053 9 C -0.147 4.147 10 C 0.566 3.434 11 O -0.527 6.527 12 N -0.709 5.709 13 C 0.119 3.881 14 H 0.109 0.891 15 C -0.136 4.136 16 C -0.073 4.073 17 H 0.099 0.901 18 C -0.083 4.083 19 C -0.088 4.088 20 C -0.150 4.150 21 C 0.095 3.905 22 F -0.140 7.140 23 C -0.151 4.151 24 C -0.087 4.087 25 C -0.144 4.144 26 C -0.010 4.010 27 H 0.386 0.614 28 H 0.080 0.920 29 H -0.262 1.262 30 H -0.223 1.223 31 H 0.148 0.852 32 H 0.140 0.860 33 H 0.401 0.599 34 H 0.101 0.899 35 H 0.078 0.922 36 H 0.134 0.866 37 H 0.136 0.864 38 H 0.136 0.864 39 H 0.132 0.868 40 H 0.076 0.924 41 H 0.098 0.902 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.906 2.156 -0.162 2.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.180 4.180 3 Si 0.568 3.432 4 C -0.119 4.119 5 C 0.109 3.891 6 F -0.091 7.091 7 C -0.175 4.175 8 C -0.072 4.072 9 C -0.150 4.150 10 C 0.354 3.646 11 O -0.403 6.403 12 N -0.361 5.361 13 C 0.014 3.986 14 H 0.127 0.873 15 C -0.174 4.174 16 C -0.091 4.091 17 H 0.117 0.883 18 C -0.083 4.083 19 C -0.106 4.106 20 C -0.169 4.169 21 C 0.076 3.924 22 F -0.118 7.118 23 C -0.170 4.170 24 C -0.105 4.105 25 C -0.183 4.183 26 C -0.029 4.029 27 H 0.234 0.766 28 H 0.098 0.902 29 H -0.186 1.186 30 H -0.147 1.147 31 H 0.166 0.834 32 H 0.157 0.843 33 H 0.236 0.764 34 H 0.119 0.881 35 H 0.097 0.903 36 H 0.152 0.848 37 H 0.154 0.846 38 H 0.154 0.846 39 H 0.150 0.850 40 H 0.095 0.905 41 H 0.116 0.884 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.278 2.042 -0.389 2.097 hybrid contribution 0.248 -0.382 -0.941 1.045 sum -0.031 1.660 -1.330 2.127 Atomic orbital electron populations 1.86492 1.16623 1.81864 1.50004 1.24603 0.86304 1.10742 0.96362 0.95907 0.81635 0.78668 0.86957 1.19348 1.03879 0.95593 0.93119 1.17948 0.95973 0.80777 0.94401 1.91506 1.84577 1.37187 1.95829 1.21127 1.02038 0.96107 0.98268 1.21179 0.95508 0.93679 0.96803 1.19941 1.05345 0.95382 0.94381 1.18058 0.77272 0.85124 0.84159 1.90819 1.55506 1.66932 1.27085 1.45555 1.63418 1.16810 1.10282 1.21891 0.94070 0.82750 0.99915 0.87304 1.23448 0.96678 1.00963 0.96265 1.21598 0.94332 0.97466 0.95745 0.88291 1.19738 0.98397 0.95724 0.94450 1.20894 0.96645 0.93006 1.00020 1.21192 1.00059 1.01515 0.94122 1.17781 0.93207 0.88938 0.92523 1.91524 1.69583 1.67080 1.83627 1.21196 1.00542 0.93916 1.01354 1.20932 0.96144 0.98962 0.94429 1.23590 0.96383 1.03629 0.94684 1.21043 0.91438 0.91082 0.99288 0.76589 0.90171 1.18622 1.14702 0.83404 0.84275 0.76358 0.88088 0.90291 0.84814 0.84573 0.84637 0.85037 0.90501 0.88414 0.83098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.27 12.86 -35.23 -0.45 -0.73 16 2 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 3 Si 0.67 -0.26 30.77 -169.99 -5.23 -5.49 16 4 C -0.12 -0.23 4.80 -104.61 -0.50 -0.73 16 5 C 0.13 0.27 6.68 -39.27 -0.26 0.00 16 6 F -0.11 -0.38 12.82 2.25 0.03 -0.36 16 7 C -0.16 0.06 10.01 -39.57 -0.40 -0.33 16 8 C -0.05 0.08 9.54 -39.20 -0.37 -0.29 16 9 C -0.15 -0.09 5.87 -104.97 -0.62 -0.71 16 10 C 0.57 0.81 7.77 -12.38 -0.10 0.71 16 11 O -0.53 -2.69 15.94 5.31 0.08 -2.61 16 12 N -0.71 1.20 5.21 -53.99 -0.28 0.92 16 13 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 14 H 0.11 -0.01 7.46 -51.93 -0.39 -0.39 16 15 C -0.14 0.44 7.29 -25.92 -0.19 0.25 16 16 C -0.07 0.22 3.86 -90.96 -0.35 -0.13 16 17 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 18 C -0.08 0.12 5.29 -104.62 -0.55 -0.43 16 19 C -0.09 0.10 8.62 -39.59 -0.34 -0.24 16 20 C -0.15 -0.02 10.03 -39.52 -0.40 -0.42 16 21 C 0.09 0.14 7.30 -39.42 -0.29 -0.15 16 22 F -0.14 -0.43 17.27 2.25 0.04 -0.39 16 23 C -0.15 -0.02 10.03 -39.51 -0.40 -0.42 16 24 C -0.09 0.10 9.71 -39.59 -0.38 -0.28 16 25 C -0.14 0.32 7.25 -25.92 -0.19 0.13 16 26 C -0.01 -0.02 9.21 -39.20 -0.36 -0.38 16 27 H 0.39 -1.76 8.74 45.56 0.40 -1.36 16 28 H 0.08 -0.13 7.77 -51.93 -0.40 -0.54 16 29 H -0.26 -0.66 7.11 56.52 0.40 -0.25 16 30 H -0.22 -0.57 5.33 56.52 0.30 -0.27 16 31 H 0.15 -0.38 8.06 -52.48 -0.42 -0.80 16 32 H 0.14 -0.71 6.40 -52.49 -0.34 -1.05 16 33 H 0.40 -1.76 6.73 -40.82 -0.27 -2.03 16 34 H 0.10 -0.33 7.73 -51.93 -0.40 -0.73 16 35 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 36 H 0.13 -0.39 6.64 -52.48 -0.35 -0.74 16 37 H 0.14 -0.15 8.06 -52.48 -0.42 -0.58 16 38 H 0.14 -0.16 8.06 -52.48 -0.42 -0.58 16 39 H 0.13 -0.42 8.05 -52.48 -0.42 -0.84 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.10 -0.25 6.29 -51.93 -0.33 -0.58 16 42 H 0.15 0.19 7.59 -52.48 -0.40 -0.21 16 LS Contribution 359.62 15.07 5.42 5.42 Total: 0.00 -9.04 359.62 -11.01 -20.05 By element: Atomic # 1 Polarization: -8.28 SS G_CDS: -4.73 Total: -13.01 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -5.88 Total: -3.81 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -0.28 Total: 0.92 kcal Atomic # 8 Polarization: -2.96 SS G_CDS: -0.37 Total: -3.33 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.07 Total: -0.74 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.23 Total: -5.49 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -9.04 -11.01 -20.05 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.644 kcal (2) G-P(sol) polarization free energy of solvation -9.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.011 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.054 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds