Wall clock time and date at job start Sat Mar 6 2021 16:08:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.46988 * 2 1 4 4 C 1.50699 * 109.46961 * 119.99726 * 2 1 3 5 5 C 1.34715 * 125.66255 * 65.00474 * 4 2 1 6 6 C 1.40962 * 107.02840 * 180.27741 * 5 4 2 7 7 C 1.35942 * 106.74352 * 359.60560 * 6 5 4 8 8 C 1.47813 * 125.93090 * 180.16317 * 7 6 5 9 9 C 1.39175 * 119.99931 * 180.02562 * 8 7 6 10 10 C 1.39468 * 119.75943 * 179.75004 * 9 8 7 11 11 C 1.47561 * 120.12195 * 180.27575 * 10 9 8 12 12 O 1.21588 * 119.99666 * 180.25409 * 11 10 9 13 13 N 1.34780 * 120.00234 * 0.24978 * 11 10 9 14 14 C 1.46492 * 119.99971 * 180.02562 * 13 11 10 15 15 H 1.08995 * 112.85452 * 23.80060 * 14 13 11 16 16 C 1.53781 * 113.61630 * 154.99958 * 14 13 11 17 17 C 1.53780 * 87.08108 * 89.11457 * 16 14 13 18 18 H 1.09007 * 113.61535 * 270.80318 * 17 16 14 19 19 C 1.50701 * 113.61376 * 139.98405 * 17 16 14 20 20 C 1.38240 * 119.97630 * 299.72418 * 19 17 16 21 21 C 1.38194 * 120.02755 * 179.72781 * 20 19 17 22 22 C 1.38460 * 119.97609 * 0.52509 * 21 20 19 23 23 F 1.35091 * 120.02962 * 179.72696 * 22 21 20 24 24 C 1.38470 * 119.94374 * 359.75135 * 22 21 20 25 25 C 1.38196 * 119.97218 * 359.97438 * 24 22 21 26 26 C 1.53776 * 87.08125 * 25.43384 * 17 16 14 27 27 C 1.40213 * 119.75535 * 0.52094 * 10 9 8 28 28 O 1.35644 * 120.00253 * 179.76638 * 27 10 9 29 29 C 1.38824 * 119.99426 * 359.75359 * 27 10 9 30 30 C 1.37769 * 120.24123 * 359.97315 * 29 27 10 31 31 O 1.34335 * 125.66757 * 245.04484 * 4 2 1 32 32 H 0.96700 * 114.00156 * 300.00401 * 1 2 3 33 33 H 1.08996 * 109.47167 * 239.99839 * 2 1 3 34 34 H 1.48494 * 110.00192 * 299.99569 * 3 2 1 35 35 H 1.48497 * 110.00190 * 61.31890 * 3 2 1 36 36 H 1.08002 * 126.48277 * 0.02562 * 5 4 2 37 37 H 1.08002 * 126.62963 * 179.76094 * 6 5 4 38 38 H 1.08001 * 120.12176 * 0.02601 * 9 8 7 39 39 H 0.97002 * 119.99805 * 359.97438 * 13 11 10 40 40 H 1.09000 * 113.61824 * 203.66479 * 16 14 13 41 41 H 1.08999 * 113.61355 * 334.56547 * 16 14 13 42 42 H 1.08004 * 119.98410 * 359.97438 * 20 19 17 43 43 H 1.07999 * 120.01272 * 180.29677 * 21 20 19 44 44 H 1.07995 * 120.00958 * 179.97438 * 24 22 21 45 45 H 1.08007 * 119.98339 * 180.02562 * 25 24 22 46 46 H 1.09005 * 113.61625 * 220.01870 * 26 17 16 47 47 H 1.08999 * 113.61236 * 89.12118 * 26 17 16 48 48 H 0.96693 * 114.00807 * 269.98295 * 28 27 10 49 49 H 1.07997 * 119.87625 * 179.97438 * 29 27 10 50 50 H 1.08001 * 119.87081 * 180.02562 * 30 29 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7571 -2.0168 1.5093 6 6 2.3761 -2.2597 2.7522 7 6 2.9070 -1.0776 3.1631 8 6 3.6569 -0.8526 4.4168 9 6 4.1476 0.4148 4.7163 10 6 4.8500 0.6226 5.9031 11 6 5.3685 1.9646 6.2315 12 8 5.9846 2.1421 7.2646 13 7 5.1594 2.9933 5.3862 14 6 5.6747 4.3254 5.7120 15 1 6.5212 4.2957 6.3979 16 6 5.9120 5.2127 4.4787 17 6 4.4551 5.6803 4.6323 18 1 3.7384 5.0604 4.0936 19 6 4.2637 7.1530 4.3765 20 6 4.9262 8.0816 5.1574 21 6 4.7558 9.4323 4.9201 22 6 3.9126 9.8557 3.9068 23 9 3.7409 11.1759 3.6775 24 6 3.2450 8.9247 3.1290 25 6 3.4214 7.5745 3.3645 26 6 4.5811 5.3253 6.1233 27 6 5.0661 -0.4494 6.7807 28 8 5.7526 -0.2539 7.9341 29 6 4.5770 -1.7107 6.4691 30 6 3.8783 -1.9145 5.2994 31 8 2.6265 -0.1459 2.2318 32 1 -0.3933 0.4417 0.7650 33 1 1.7923 -0.5138 -0.8899 34 1 1.5616 2.4679 -1.2085 35 1 1.5879 2.4586 1.2242 36 1 1.2375 -2.7400 0.8983 37 1 2.4222 -3.2033 3.2757 38 1 3.9812 1.2355 4.0342 39 1 4.6683 2.8515 4.5618 40 1 6.6441 6.0032 4.6438 41 1 6.0955 4.6490 3.5640 42 1 5.5805 7.7512 5.9507 43 1 5.2773 10.1575 5.5272 44 1 2.5867 9.2538 2.3386 45 1 2.9011 6.8482 2.7576 46 1 3.6901 4.8524 6.5363 47 1 4.9492 6.1466 6.7381 48 1 6.7068 -0.3870 7.8513 49 1 4.7449 -2.5351 7.1462 50 1 3.5002 -2.8982 5.0631 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:08:26 Heat of formation + Delta-G solvation = -48.267575 kcal Electronic energy + Delta-G solvation = -37570.763677 eV Core-core repulsion = 32412.076864 eV Total energy + Delta-G solvation = -5158.686813 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.141 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -49.80039 -43.77064 -41.87406 -41.05884 -39.72375 -38.53921 -38.24800 -37.84464 -34.72561 -34.21049 -32.83700 -32.51764 -32.19084 -31.17208 -30.11542 -26.85774 -26.48519 -26.42449 -25.20205 -24.15701 -23.66214 -23.07181 -22.60129 -21.93733 -21.26530 -20.35517 -19.62623 -19.22959 -18.76273 -18.42012 -17.79998 -17.55569 -17.39380 -17.16485 -16.98624 -16.63177 -16.50894 -16.47667 -16.27087 -15.92936 -15.87061 -15.53817 -15.41250 -15.26280 -14.66505 -14.58143 -14.45045 -14.39255 -14.22107 -14.04699 -13.97304 -13.85592 -13.75912 -13.65926 -13.49119 -13.31128 -13.19594 -12.96833 -12.93638 -12.31406 -12.14539 -11.95086 -11.88657 -11.77965 -11.35097 -11.13111 -10.87792 -10.83253 -10.52677 -10.37351 -10.15225 -10.08618 -9.50967 -8.97588 -5.10697 -0.62275 -0.28763 0.09643 0.20388 0.70491 1.02451 1.37710 1.42698 1.60836 1.82729 1.87643 1.95126 2.49837 2.57174 3.03240 3.07641 3.20370 3.27625 3.31174 3.40809 3.50931 3.53183 3.59240 3.71740 3.80254 3.82962 3.89407 3.91039 3.92765 4.03261 4.09587 4.20627 4.24271 4.31423 4.33741 4.50637 4.52761 4.55655 4.59773 4.69126 4.72713 4.77222 4.78349 4.87592 4.91649 4.94076 4.96887 5.01322 5.05740 5.09502 5.12938 5.21786 5.34348 5.38200 5.43236 5.54746 5.86947 5.90331 6.16255 6.37252 6.62202 7.14970 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.697 3.303 4 C -0.050 4.050 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.054 4.054 10 C -0.164 4.164 11 C 0.564 3.436 12 O -0.514 6.514 13 N -0.712 5.712 14 C 0.121 3.879 15 H 0.108 0.892 16 C -0.135 4.135 17 C -0.074 4.074 18 H 0.098 0.902 19 C -0.082 4.082 20 C -0.088 4.088 21 C -0.150 4.150 22 C 0.094 3.906 23 F -0.140 7.140 24 C -0.151 4.151 25 C -0.087 4.087 26 C -0.145 4.145 27 C 0.181 3.819 28 O -0.475 6.475 29 C -0.148 4.148 30 C -0.052 4.052 31 O -0.166 6.166 32 H 0.380 0.620 33 H 0.137 0.863 34 H -0.248 1.248 35 H -0.254 1.254 36 H 0.154 0.846 37 H 0.155 0.845 38 H 0.135 0.865 39 H 0.399 0.601 40 H 0.100 0.900 41 H 0.079 0.921 42 H 0.134 0.866 43 H 0.136 0.864 44 H 0.135 0.865 45 H 0.131 0.869 46 H 0.076 0.924 47 H 0.097 0.903 48 H 0.400 0.600 49 H 0.146 0.854 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.008 -3.626 -2.981 5.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.596 3.404 4 C -0.100 4.100 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.073 4.073 10 C -0.168 4.168 11 C 0.351 3.649 12 O -0.389 6.389 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.173 4.173 17 C -0.093 4.093 18 H 0.117 0.883 19 C -0.082 4.082 20 C -0.105 4.105 21 C -0.169 4.169 22 C 0.075 3.925 23 F -0.118 7.118 24 C -0.170 4.170 25 C -0.105 4.105 26 C -0.184 4.184 27 C 0.134 3.866 28 O -0.287 6.287 29 C -0.167 4.167 30 C -0.070 4.070 31 O -0.064 6.064 32 H 0.229 0.771 33 H 0.155 0.845 34 H -0.172 1.172 35 H -0.178 1.178 36 H 0.172 0.828 37 H 0.172 0.828 38 H 0.153 0.847 39 H 0.235 0.765 40 H 0.119 0.881 41 H 0.098 0.902 42 H 0.152 0.848 43 H 0.154 0.846 44 H 0.153 0.847 45 H 0.149 0.851 46 H 0.094 0.906 47 H 0.115 0.885 48 H 0.259 0.741 49 H 0.164 0.836 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.876 -2.474 -2.528 4.004 hybrid contribution -1.143 -0.322 -0.179 1.201 sum 0.733 -2.796 -2.708 3.961 Atomic orbital electron populations 1.86673 1.16671 1.80115 1.49226 1.24346 0.84001 1.12164 0.93901 0.94592 0.91329 0.73416 0.81074 1.22840 1.01223 0.93785 0.92119 1.21580 1.03679 0.95692 0.97836 1.21868 1.02780 0.98503 0.97541 1.20269 1.03049 0.87488 0.90647 1.17566 1.00236 0.94167 0.91438 1.21286 0.94471 0.96579 0.94923 1.20261 1.05535 0.94696 0.96318 1.17967 0.79692 0.83741 0.83517 1.90843 1.39780 1.84136 1.24138 1.45595 1.58133 1.08388 1.24320 1.21845 0.97602 0.80927 0.98051 0.87367 1.23447 0.96273 0.99257 0.98362 1.21607 0.97886 0.91950 0.97814 0.88349 1.19742 0.97327 0.95086 0.96032 1.20892 0.99008 0.91541 0.99103 1.21188 1.00036 0.97214 0.98430 1.17778 0.99284 0.77771 0.97662 1.91519 1.94222 1.32104 1.93986 1.21190 1.01660 0.93107 1.01047 1.20929 0.97590 0.94827 0.97171 1.23591 1.00037 0.99279 0.95446 1.18600 0.93044 0.90564 0.84398 1.84748 1.23985 1.92159 1.27809 1.21407 1.00854 0.96831 0.97580 1.21132 0.95288 0.98475 0.92155 1.83917 1.57972 1.37945 1.26524 0.77131 0.84512 1.17225 1.17837 0.82790 0.82778 0.84734 0.76496 0.88127 0.90228 0.84796 0.84584 0.84678 0.85108 0.90562 0.88469 0.74087 0.83605 0.84201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.13 12.88 -35.23 -0.45 -0.33 16 2 C -0.03 0.05 2.98 36.01 0.11 0.16 16 3 Si 0.70 -1.52 32.11 -169.99 -5.46 -6.97 16 4 C -0.05 0.02 6.20 -35.56 -0.22 -0.20 16 5 C -0.17 0.03 10.78 -39.80 -0.43 -0.40 16 6 C -0.19 0.10 10.26 -39.37 -0.40 -0.31 16 7 C 0.04 0.00 7.03 -36.49 -0.26 -0.26 16 8 C -0.03 0.02 5.87 -105.03 -0.62 -0.59 16 9 C -0.05 0.05 9.20 -38.78 -0.36 -0.31 16 10 C -0.16 -0.09 5.88 -104.90 -0.62 -0.71 16 11 C 0.56 0.98 7.76 -12.46 -0.10 0.89 16 12 O -0.51 -2.65 14.74 -16.67 -0.25 -2.90 16 13 N -0.71 0.79 5.21 -54.05 -0.28 0.51 16 14 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 15 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 16 C -0.14 0.41 7.29 -25.92 -0.19 0.22 16 17 C -0.07 0.19 3.86 -90.96 -0.35 -0.17 16 18 H 0.10 -0.32 8.09 -51.92 -0.42 -0.74 16 19 C -0.08 0.09 5.29 -104.62 -0.55 -0.47 16 20 C -0.09 0.08 8.62 -39.60 -0.34 -0.27 16 21 C -0.15 -0.05 10.03 -39.52 -0.40 -0.45 16 22 C 0.09 0.16 7.30 -39.41 -0.29 -0.13 16 23 F -0.14 -0.45 17.27 2.25 0.04 -0.42 16 24 C -0.15 -0.07 10.03 -39.51 -0.40 -0.46 16 25 C -0.09 0.06 9.71 -39.59 -0.38 -0.32 16 26 C -0.14 0.23 7.25 -25.92 -0.19 0.04 16 27 C 0.18 0.12 6.72 -38.62 -0.26 -0.14 16 28 O -0.48 -0.69 11.55 -40.59 -0.47 -1.16 16 29 C -0.15 0.19 9.96 -39.54 -0.39 -0.20 16 30 C -0.05 0.09 9.54 -39.15 -0.37 -0.28 16 31 O -0.17 0.00 8.80 4.58 0.04 0.04 16 32 H 0.38 -1.11 8.70 45.56 0.40 -0.71 16 33 H 0.14 -0.40 7.96 -51.93 -0.41 -0.81 16 34 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 35 H -0.25 0.02 7.11 56.52 0.40 0.42 16 36 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 37 H 0.15 -0.40 7.25 -52.49 -0.38 -0.78 16 38 H 0.13 -0.38 6.24 -52.49 -0.33 -0.71 16 39 H 0.40 -1.32 6.73 -40.82 -0.27 -1.60 16 40 H 0.10 -0.32 7.73 -51.93 -0.40 -0.72 16 41 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.13 -0.35 6.64 -52.48 -0.35 -0.70 16 43 H 0.14 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 45 H 0.13 -0.34 8.05 -52.48 -0.42 -0.76 16 46 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 47 H 0.10 -0.20 6.29 -51.93 -0.33 -0.52 16 48 H 0.40 -0.94 9.06 45.56 0.41 -0.53 16 49 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 50 H 0.14 -0.54 6.96 -52.49 -0.37 -0.91 16 LS Contribution 428.33 15.07 6.45 6.45 Total: 0.00 -9.82 428.33 -12.66 -22.48 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -4.99 Total: -12.91 kcal Atomic # 6 Polarization: 2.48 SS G_CDS: -7.29 Total: -4.81 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.28 Total: 0.51 kcal Atomic # 8 Polarization: -3.21 SS G_CDS: -1.13 Total: -4.34 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.46 Total: -6.97 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -9.82 -12.66 -22.48 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.785 kcal (2) G-P(sol) polarization free energy of solvation -9.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds