Wall clock time and date at job start Sat Mar 6 2021 16:08:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.34662 * 124.84759 * 2 1 4 4 C 1.36774 * 108.39417 * 180.02562 * 3 2 1 5 5 C 1.47266 * 126.94073 * 179.97438 * 4 3 2 6 6 O 1.21624 * 119.99835 * 180.02562 * 5 4 3 7 7 N 1.34778 * 119.99961 * 0.02562 * 5 4 3 8 8 C 1.46500 * 119.99919 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.85132 * 25.33083 * 8 7 5 10 10 C 1.53781 * 113.61711 * 156.52821 * 8 7 5 11 11 C 1.53785 * 87.08277 * 89.19510 * 10 8 7 12 12 H 1.08999 * 113.61409 * 270.80258 * 11 10 8 13 13 C 1.50700 * 113.61307 * 139.98134 * 11 10 8 14 14 C 1.38242 * 119.97201 * 299.73295 * 13 11 10 15 15 C 1.38199 * 120.02265 * 179.72741 * 14 13 11 16 16 C 1.38468 * 119.97338 * 0.56630 * 15 14 13 17 17 F 1.35101 * 120.02393 * 179.68619 * 16 15 14 18 18 C 1.38459 * 119.94509 * 359.70391 * 16 15 14 19 19 C 1.38196 * 119.97653 * 359.97438 * 18 16 15 20 20 C 1.53776 * 87.07661 * 25.43397 * 11 10 8 21 21 C 1.46684 * 106.11732 * 0.22912 * 4 3 2 22 22 C 1.34488 * 106.33036 * 359.62491 * 21 4 3 23 23 C 1.50704 * 125.57102 * 180.16435 * 22 21 4 24 24 O 1.42894 * 109.46893 * 210.25169 * 23 22 21 25 25 Si 1.86299 * 109.46932 * 330.24984 * 23 22 21 26 26 H 1.09000 * 109.47398 * 89.97471 * 1 2 3 27 27 H 1.08999 * 109.46830 * 209.97069 * 1 2 3 28 28 H 1.09000 * 109.47288 * 329.97117 * 1 2 3 29 29 H 1.07992 * 125.80384 * 0.05003 * 3 2 1 30 30 H 0.96998 * 120.00229 * 359.97438 * 7 5 4 31 31 H 1.08993 * 113.62030 * 203.74957 * 10 8 7 32 32 H 1.09006 * 113.61033 * 334.65409 * 10 8 7 33 33 H 1.07998 * 119.99103 * 359.97438 * 14 13 11 34 34 H 1.07999 * 120.01717 * 180.24793 * 15 14 13 35 35 H 1.08001 * 120.00990 * 179.97438 * 18 16 15 36 36 H 1.08004 * 119.98418 * 179.97438 * 19 18 16 37 37 H 1.09003 * 113.61687 * 220.01420 * 20 11 10 38 38 H 1.09009 * 113.61565 * 89.11769 * 20 11 10 39 39 H 1.07996 * 126.83118 * 179.75568 * 21 4 3 40 40 H 1.08998 * 109.47137 * 90.25119 * 23 22 21 41 41 H 0.96703 * 114.00091 * 180.02562 * 24 23 22 42 42 H 1.48506 * 110.00053 * 178.67918 * 25 23 22 43 43 H 1.48498 * 110.00098 * 300.00016 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5461 0.7177 -0.0006 5 6 4.7283 1.5959 -0.0013 6 8 5.8445 1.1130 -0.0023 7 7 4.5732 2.9347 -0.0009 8 6 5.7493 3.8083 -0.0022 9 1 6.6299 3.3320 -0.4331 10 6 5.4725 5.2133 -0.5629 11 6 5.1029 5.6272 0.8713 12 1 4.0506 5.4762 1.1119 13 6 5.5991 6.9986 1.2506 14 6 6.9542 7.2718 1.2340 15 6 7.4100 8.5308 1.5763 16 6 6.5097 9.5153 1.9471 17 9 6.9547 10.7446 2.2880 18 6 5.1532 9.2388 1.9687 19 6 4.6993 7.9810 1.6197 20 6 6.0163 4.4870 1.3516 21 6 3.5375 -0.7491 -0.0066 22 6 2.2447 -1.1196 -0.0006 23 6 1.7398 -2.5396 -0.0001 24 8 0.4803 -2.5975 -0.6726 25 14 2.9642 -3.6344 -0.8793 26 1 -0.3634 0.0005 -1.0276 27 1 -0.3633 -0.8903 0.5134 28 1 -0.3634 0.8897 0.5143 29 1 1.8766 2.1241 0.0008 30 1 3.6830 3.3199 -0.0006 31 1 6.3617 5.7134 -0.9464 32 1 4.6331 5.2486 -1.2575 33 1 7.6566 6.5023 0.9497 34 1 8.4683 8.7453 1.5594 35 1 4.4501 10.0058 2.2582 36 1 3.6412 7.7650 1.6369 37 1 5.6161 3.9360 2.2027 38 1 7.0544 4.7886 1.4917 39 1 4.3981 -1.4015 -0.0123 40 1 1.6189 -2.8818 1.0277 41 1 0.0948 -3.4835 -0.7101 42 1 2.4932 -5.0426 -0.8578 43 1 3.1378 -3.1782 -2.2818 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:08:36 Heat of formation + Delta-G solvation = -3.618049 kcal Electronic energy + Delta-G solvation = -26883.712228 eV Core-core repulsion = 22811.804599 eV Total energy + Delta-G solvation = -4071.907629 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -49.90196 -42.40327 -41.37064 -39.95729 -38.48879 -37.82816 -34.50835 -33.65040 -32.10314 -31.77892 -30.97388 -27.67066 -26.63361 -26.41579 -25.68402 -24.16522 -23.66171 -22.48643 -21.07437 -20.40491 -20.07564 -18.74749 -18.49878 -18.43669 -17.48965 -17.18826 -16.79603 -16.60812 -16.56794 -16.54407 -15.87878 -15.55389 -15.49119 -15.32528 -15.10702 -14.45875 -14.44885 -14.43954 -14.13449 -13.89907 -13.87382 -13.64433 -13.37931 -13.27958 -13.18625 -13.08947 -12.83702 -12.68455 -12.16059 -12.10960 -11.81257 -11.60460 -11.17311 -10.99612 -10.78947 -10.07736 -10.02064 -9.54680 -9.45308 -9.13859 -4.89198 0.14533 0.29268 0.76732 1.02980 1.50572 1.57617 1.88464 2.06374 2.28422 2.56264 2.59874 3.14457 3.32213 3.52523 3.69346 3.71447 3.78193 3.86108 3.90060 3.98217 3.99494 4.03911 4.25409 4.30564 4.35258 4.39142 4.45343 4.49282 4.51057 4.71145 4.78930 4.83309 4.89548 4.94242 4.98642 5.02052 5.07009 5.08506 5.10157 5.19543 5.24934 5.31853 5.57436 5.68511 5.74714 5.94890 6.02558 6.25803 6.51595 6.68879 7.39084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.072 3.928 2 N -0.428 5.428 3 C 0.069 3.931 4 C -0.259 4.259 5 C 0.592 3.408 6 O -0.591 6.591 7 N -0.698 5.698 8 C 0.115 3.885 9 H 0.082 0.918 10 C -0.125 4.125 11 C -0.061 4.061 12 H 0.118 0.882 13 C -0.081 4.081 14 C -0.092 4.092 15 C -0.160 4.160 16 C 0.063 3.937 17 F -0.156 7.156 18 C -0.160 4.160 19 C -0.087 4.087 20 C -0.144 4.144 21 C -0.161 4.161 22 C 0.013 3.987 23 C -0.045 4.045 24 O -0.553 6.553 25 Si 0.763 3.237 26 H 0.074 0.926 27 H 0.093 0.907 28 H 0.105 0.895 29 H 0.210 0.790 30 H 0.413 0.587 31 H 0.100 0.900 32 H 0.089 0.911 33 H 0.148 0.852 34 H 0.141 0.859 35 H 0.144 0.856 36 H 0.156 0.844 37 H 0.067 0.933 38 H 0.096 0.904 39 H 0.155 0.845 40 H 0.103 0.897 41 H 0.400 0.600 42 H -0.271 1.271 43 H -0.312 1.312 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.350 -1.069 1.356 7.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.101 5.101 3 C -0.069 4.069 4 C -0.269 4.269 5 C 0.382 3.618 6 O -0.473 6.473 7 N -0.350 5.350 8 C 0.010 3.990 9 H 0.100 0.900 10 C -0.163 4.163 11 C -0.079 4.079 12 H 0.136 0.864 13 C -0.081 4.081 14 C -0.109 4.109 15 C -0.179 4.179 16 C 0.045 3.955 17 F -0.135 7.135 18 C -0.178 4.178 19 C -0.105 4.105 20 C -0.182 4.182 21 C -0.185 4.185 22 C -0.096 4.096 23 C -0.154 4.154 24 O -0.364 6.364 25 Si 0.668 3.332 26 H 0.093 0.907 27 H 0.112 0.888 28 H 0.124 0.876 29 H 0.226 0.774 30 H 0.250 0.750 31 H 0.118 0.882 32 H 0.108 0.892 33 H 0.166 0.834 34 H 0.159 0.841 35 H 0.161 0.839 36 H 0.174 0.826 37 H 0.086 0.914 38 H 0.115 0.885 39 H 0.173 0.827 40 H 0.121 0.879 41 H 0.252 0.748 42 H -0.197 1.197 43 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges -6.698 -1.326 0.651 6.859 hybrid contribution -1.048 0.247 -0.124 1.084 sum -7.746 -1.079 0.527 7.838 Atomic orbital electron populations 1.22319 0.74629 1.05657 1.04211 1.43721 1.08160 1.04801 1.53432 1.22425 0.89064 0.93186 1.02200 1.20277 0.92218 0.93754 1.20666 1.17615 0.87684 0.82131 0.74367 1.90750 1.27654 1.76129 1.52727 1.45325 1.09883 1.04550 1.75200 1.21818 0.89195 0.90375 0.97659 0.90017 1.23383 1.03653 0.93184 0.96032 1.21589 1.00714 0.89218 0.96403 0.86385 1.19976 0.93148 0.96040 0.98907 1.21126 0.96097 0.95698 0.98018 1.21359 1.00505 0.93540 1.02485 1.18128 0.93939 0.80584 1.02897 1.91470 1.90259 1.41543 1.90246 1.21396 0.93564 0.99641 1.03243 1.21227 1.01277 0.91156 0.96853 1.23572 1.00997 0.96303 0.97362 1.21749 0.95224 0.93795 1.07722 1.19909 0.90164 0.88120 1.11396 1.24361 0.92630 0.95955 1.02503 1.86483 1.33784 1.36435 1.79701 0.93521 0.85742 0.74663 0.79295 0.90706 0.88808 0.87614 0.77366 0.74959 0.88161 0.89215 0.83414 0.84118 0.83856 0.82595 0.91394 0.88524 0.82723 0.87916 0.74826 1.19736 1.23997 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.46 9.81 127.77 1.25 0.79 16 2 N -0.43 0.34 3.09 -533.26 -1.65 -1.30 16 3 C 0.07 -0.16 10.83 83.92 0.91 0.75 16 4 C -0.26 -1.18 6.29 -19.04 -0.12 -1.30 16 5 C 0.59 4.29 7.81 86.62 0.68 4.96 16 6 O -0.59 -9.79 16.59 -4.11 -0.07 -9.86 16 7 N -0.70 0.86 5.26 -443.45 -2.33 -1.48 16 8 C 0.12 -0.14 4.30 45.52 0.20 0.06 16 9 H 0.08 0.33 7.50 -2.39 -0.02 0.32 16 10 C -0.12 0.76 7.29 31.12 0.23 0.99 16 11 C -0.06 0.40 3.87 -11.01 -0.04 0.35 16 12 H 0.12 -1.18 8.09 -2.39 -0.02 -1.20 16 13 C -0.08 0.25 5.29 -19.86 -0.11 0.15 16 14 C -0.09 0.14 8.62 22.26 0.19 0.34 16 15 C -0.16 -0.27 10.03 22.32 0.22 -0.04 16 16 C 0.06 0.28 7.30 22.38 0.16 0.45 16 17 F -0.16 -1.28 17.27 44.97 0.78 -0.51 16 18 C -0.16 -0.12 10.03 22.31 0.22 0.10 16 19 C -0.09 0.26 9.71 22.26 0.22 0.48 16 20 C -0.14 0.43 7.25 31.12 0.23 0.65 16 21 C -0.16 -0.89 9.49 23.62 0.22 -0.66 16 22 C 0.01 0.03 6.17 40.98 0.25 0.28 16 23 C -0.04 0.10 2.86 71.24 0.20 0.31 16 24 O -0.55 1.72 10.29 -148.98 -1.53 0.18 16 25 Si 0.76 -0.58 31.11 68.60 2.13 1.55 16 26 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 27 H 0.09 -0.57 6.73 -2.39 -0.02 -0.59 16 28 H 0.11 -1.23 8.13 -2.39 -0.02 -1.25 16 29 H 0.21 -2.44 7.45 -2.91 -0.02 -2.46 16 30 H 0.41 -3.44 7.65 -92.71 -0.71 -4.15 16 31 H 0.10 -0.60 7.73 -2.39 -0.02 -0.62 16 32 H 0.09 -0.72 8.14 -2.38 -0.02 -0.74 16 33 H 0.15 -0.73 6.64 -2.91 -0.02 -0.75 16 34 H 0.14 -0.06 8.06 -2.91 -0.02 -0.09 16 35 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 36 H 0.16 -1.31 8.05 -2.91 -0.02 -1.33 16 37 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 38 H 0.10 -0.32 6.29 -2.38 -0.01 -0.33 16 39 H 0.16 0.69 6.88 -2.91 -0.02 0.67 16 40 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 41 H 0.40 -4.27 8.74 -74.06 -0.65 -4.92 16 42 H -0.27 -0.37 7.11 99.48 0.71 0.34 16 43 H -0.31 -2.89 7.11 99.48 0.71 -2.18 16 Total: 0.00 -25.54 363.15 1.99 -23.55 By element: Atomic # 1 Polarization: -20.53 SS G_CDS: -0.26 Total: -20.79 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: 4.92 Total: 8.65 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -3.98 Total: -2.78 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: -1.60 Total: -9.67 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 0.78 Total: -0.51 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: 2.13 Total: 1.55 kcal Total: -25.54 1.99 -23.55 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.928 kcal (2) G-P(sol) polarization free energy of solvation -25.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.612 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.994 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.546 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds